Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01002:0913
Extra
PDB:
ATOM 1 O3' U A1001 48.773 96.428 82.530 1.00 24.60 O
ATOM 2 P C A1002 50.275 96.930 82.735 1.00 22.98 P
ATOM 3 OP1 C A1002 50.365 97.592 84.049 1.00 20.67 O
ATOM 4 OP2 C A1002 50.668 97.659 81.512 1.00 26.34 O
ATOM 5 O5' C A1002 51.125 95.591 82.760 1.00 23.71 O
ATOM 6 C5' C A1002 50.906 94.605 83.768 1.00 23.98 C
ATOM 7 C4' C A1002 51.937 93.519 83.655 1.00 25.95 C
ATOM 8 O4' C A1002 51.743 92.777 82.430 1.00 24.22 O
ATOM 9 C3' C A1002 53.373 93.993 83.510 1.00 26.91 C
ATOM 10 O3' C A1002 53.892 94.414 84.776 1.00 30.40 O
ATOM 11 C2' C A1002 54.053 92.728 82.988 1.00 26.03 C
ATOM 12 O2' C A1002 54.318 91.791 84.009 1.00 27.47 O
ATOM 13 C1' C A1002 52.956 92.131 82.102 1.00 24.14 C
ATOM 14 N1 C A1002 53.202 92.257 80.658 1.00 23.97 N
ATOM 15 C2 C A1002 54.128 91.385 80.060 1.00 24.66 C
ATOM 16 O2 C A1002 54.724 90.557 80.773 1.00 23.65 O
ATOM 17 N3 C A1002 54.349 91.470 78.725 1.00 23.43 N
ATOM 18 C4 C A1002 53.689 92.373 77.993 1.00 22.50 C
ATOM 19 N4 C A1002 53.917 92.395 76.677 1.00 21.91 N
ATOM 20 C5 C A1002 52.759 93.285 78.578 1.00 21.47 C
ATOM 21 C6 C A1002 52.547 93.193 79.901 1.00 23.38 C
ATOM 22 P C A1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 23 OP1 C A1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 24 OP2 C A1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 25 O5' C A1003 54.231 96.910 85.185 1.00 31.34 O
TER
ATOM 1 O3' C B 912 55.302 94.624 71.228 1.00 27.63 O
ATOM 2 P A B 913 53.953 93.755 71.214 1.00 26.71 P
ATOM 3 OP1 A B 913 53.227 94.156 69.982 1.00 24.06 O
ATOM 4 OP2 A B 913 53.276 93.861 72.530 1.00 23.62 O
ATOM 5 O5' A B 913 54.514 92.277 71.034 1.00 23.76 O
ATOM 6 C5' A B 913 55.292 91.942 69.872 1.00 23.87 C
ATOM 7 C4' A B 913 55.935 90.595 70.037 1.00 24.07 C
ATOM 8 O4' A B 913 56.900 90.658 71.110 1.00 24.63 O
ATOM 9 C3' A B 913 55.000 89.475 70.449 1.00 25.20 C
ATOM 10 O3' A B 913 54.311 88.929 69.336 1.00 26.25 O
ATOM 11 C2' A B 913 55.960 88.485 71.078 1.00 24.84 C
ATOM 12 O2' A B 913 56.699 87.784 70.102 1.00 25.14 O
ATOM 13 C1' A B 913 56.905 89.431 71.815 1.00 23.52 C
ATOM 14 N9 A B 913 56.501 89.692 73.196 1.00 20.69 N
ATOM 15 C8 A B 913 55.794 90.758 73.692 1.00 19.25 C
ATOM 16 N7 A B 913 55.618 90.717 74.988 1.00 18.44 N
ATOM 17 C5 A B 913 56.243 89.540 75.371 1.00 18.87 C
ATOM 18 C6 A B 913 56.410 88.922 76.618 1.00 18.64 C
ATOM 19 N6 A B 913 55.962 89.434 77.763 1.00 19.25 N
ATOM 20 N1 A B 913 57.067 87.745 76.653 1.00 18.88 N
ATOM 21 C2 A B 913 57.537 87.237 75.508 1.00 20.42 C
ATOM 22 N3 A B 913 57.455 87.728 74.277 1.00 20.97 N
ATOM 23 C4 A B 913 56.784 88.895 74.277 1.00 20.21 C
ATOM 24 P U B 914 52.821 88.367 69.528 1.00 26.98 P
ATOM 25 OP1 U B 914 52.277 88.085 68.182 1.00 28.90 O
ATOM 26 OP2 U B 914 52.078 89.273 70.443 1.00 24.64 O
ATOM 27 O5' U B 914 53.046 86.992 70.288 1.00 25.10 O
TER
ATOM 2 P C A1002 50.275 96.930 82.735 1.00 22.98 P
ATOM 3 OP1 C A1002 50.365 97.592 84.049 1.00 20.67 O
ATOM 4 OP2 C A1002 50.668 97.659 81.512 1.00 26.34 O
ATOM 5 O5' C A1002 51.125 95.591 82.760 1.00 23.71 O
ATOM 6 C5' C A1002 50.906 94.605 83.768 1.00 23.98 C
ATOM 7 C4' C A1002 51.937 93.519 83.655 1.00 25.95 C
ATOM 8 O4' C A1002 51.743 92.777 82.430 1.00 24.22 O
ATOM 9 C3' C A1002 53.373 93.993 83.510 1.00 26.91 C
ATOM 10 O3' C A1002 53.892 94.414 84.776 1.00 30.40 O
ATOM 11 C2' C A1002 54.053 92.728 82.988 1.00 26.03 C
ATOM 12 O2' C A1002 54.318 91.791 84.009 1.00 27.47 O
ATOM 13 C1' C A1002 52.956 92.131 82.102 1.00 24.14 C
ATOM 14 N1 C A1002 53.202 92.257 80.658 1.00 23.97 N
ATOM 15 C2 C A1002 54.128 91.385 80.060 1.00 24.66 C
ATOM 16 O2 C A1002 54.724 90.557 80.773 1.00 23.65 O
ATOM 17 N3 C A1002 54.349 91.470 78.725 1.00 23.43 N
ATOM 18 C4 C A1002 53.689 92.373 77.993 1.00 22.50 C
ATOM 19 N4 C A1002 53.917 92.395 76.677 1.00 21.91 N
ATOM 20 C5 C A1002 52.759 93.285 78.578 1.00 21.47 C
ATOM 21 C6 C A1002 52.547 93.193 79.901 1.00 23.38 C
ATOM 22 P C A1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 23 OP1 C A1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 24 OP2 C A1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 25 O5' C A1003 54.231 96.910 85.185 1.00 31.34 O
TER
ATOM 1 O3' C B 912 55.302 94.624 71.228 1.00 27.63 O
ATOM 2 P A B 913 53.953 93.755 71.214 1.00 26.71 P
ATOM 3 OP1 A B 913 53.227 94.156 69.982 1.00 24.06 O
ATOM 4 OP2 A B 913 53.276 93.861 72.530 1.00 23.62 O
ATOM 5 O5' A B 913 54.514 92.277 71.034 1.00 23.76 O
ATOM 6 C5' A B 913 55.292 91.942 69.872 1.00 23.87 C
ATOM 7 C4' A B 913 55.935 90.595 70.037 1.00 24.07 C
ATOM 8 O4' A B 913 56.900 90.658 71.110 1.00 24.63 O
ATOM 9 C3' A B 913 55.000 89.475 70.449 1.00 25.20 C
ATOM 10 O3' A B 913 54.311 88.929 69.336 1.00 26.25 O
ATOM 11 C2' A B 913 55.960 88.485 71.078 1.00 24.84 C
ATOM 12 O2' A B 913 56.699 87.784 70.102 1.00 25.14 O
ATOM 13 C1' A B 913 56.905 89.431 71.815 1.00 23.52 C
ATOM 14 N9 A B 913 56.501 89.692 73.196 1.00 20.69 N
ATOM 15 C8 A B 913 55.794 90.758 73.692 1.00 19.25 C
ATOM 16 N7 A B 913 55.618 90.717 74.988 1.00 18.44 N
ATOM 17 C5 A B 913 56.243 89.540 75.371 1.00 18.87 C
ATOM 18 C6 A B 913 56.410 88.922 76.618 1.00 18.64 C
ATOM 19 N6 A B 913 55.962 89.434 77.763 1.00 19.25 N
ATOM 20 N1 A B 913 57.067 87.745 76.653 1.00 18.88 N
ATOM 21 C2 A B 913 57.537 87.237 75.508 1.00 20.42 C
ATOM 22 N3 A B 913 57.455 87.728 74.277 1.00 20.97 N
ATOM 23 C4 A B 913 56.784 88.895 74.277 1.00 20.21 C
ATOM 24 P U B 914 52.821 88.367 69.528 1.00 26.98 P
ATOM 25 OP1 U B 914 52.277 88.085 68.182 1.00 28.90 O
ATOM 26 OP2 U B 914 52.078 89.273 70.443 1.00 24.64 O
ATOM 27 O5' U B 914 53.046 86.992 70.288 1.00 25.10 O
TER
Atoms:
C2: (54.128,91.385,80.060)
OP1: (50.365,97.592,84.049)
OP2: (50.668,97.659,81.512)
C4: (53.689,92.373,77.993)
O5': (51.125,95.591,82.760)
C3': (53.373,93.993,83.510)
C1': (52.956,92.131,82.102)
O4': (51.743,92.777,82.430)
C5': (50.906,94.605,83.768)
P: (50.275,96.930,82.735)
O2: (54.724,90.557,80.773)
C4': (51.937,93.519,83.655)
C2': (54.053,92.728,82.988)
O2': (54.318,91.791,84.009)
N1: (53.202,92.257,80.658)
N3: (54.349,91.470,78.725)
N4: (53.917,92.395,76.677)
C6: (52.547,93.193,79.901)
C5: (52.759,93.285,78.578)
O3': (53.892,94.414,84.776)
OP1: (50.365,97.592,84.049)
OP2: (50.668,97.659,81.512)
C4: (53.689,92.373,77.993)
O5': (51.125,95.591,82.760)
C3': (53.373,93.993,83.510)
C1': (52.956,92.131,82.102)
O4': (51.743,92.777,82.430)
C5': (50.906,94.605,83.768)
P: (50.275,96.930,82.735)
O2: (54.724,90.557,80.773)
C4': (51.937,93.519,83.655)
C2': (54.053,92.728,82.988)
O2': (54.318,91.791,84.009)
N1: (53.202,92.257,80.658)
N3: (54.349,91.470,78.725)
N4: (53.917,92.395,76.677)
C6: (52.547,93.193,79.901)
C5: (52.759,93.285,78.578)
O3': (53.892,94.414,84.776)
OP1: (53.227,94.156,69.982)
OP2: (53.276,93.861,72.530)
C3': (55.000,89.475,70.449)
C1': (56.905,89.431,71.815)
C5': (55.292,91.942,69.872)
O4': (56.900,90.658,71.110)
C8: (55.794,90.758,73.692)
O2': (56.699,87.784,70.102)
C6: (56.410,88.922,76.618)
C5: (56.243,89.540,75.371)
C4: (56.784,88.895,74.277)
P: (53.953,93.755,71.214)
C4': (55.935,90.595,70.037)
C2': (55.960,88.485,71.078)
C2: (57.537,87.237,75.508)
N1: (57.067,87.745,76.653)
N3: (57.455,87.728,74.277)
N6: (55.962,89.434,77.763)
N7: (55.618,90.717,74.988)
N9: (56.501,89.692,73.196)
O5': (54.514,92.277,71.034)
O3': (54.311,88.929,69.336)
OP2: (53.276,93.861,72.530)
C3': (55.000,89.475,70.449)
C1': (56.905,89.431,71.815)
C5': (55.292,91.942,69.872)
O4': (56.900,90.658,71.110)
C8: (55.794,90.758,73.692)
O2': (56.699,87.784,70.102)
C6: (56.410,88.922,76.618)
C5: (56.243,89.540,75.371)
C4: (56.784,88.895,74.277)
P: (53.953,93.755,71.214)
C4': (55.935,90.595,70.037)
C2': (55.960,88.485,71.078)
C2: (57.537,87.237,75.508)
N1: (57.067,87.745,76.653)
N3: (57.455,87.728,74.277)
N6: (55.962,89.434,77.763)
N7: (55.618,90.717,74.988)
N9: (56.501,89.692,73.196)
O5': (54.514,92.277,71.034)
O3': (54.311,88.929,69.336)
Image (generated by PyMOL):