Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1103:A1040
Extra
PDB:
ATOM 1 O3' C A1102 -117.400 70.736 179.789 1.00 84.71 O
ATOM 2 P G A1103 -118.582 70.317 180.800 1.00 91.04 P
ATOM 3 OP1 G A1103 -117.973 69.480 181.865 1.00 91.04 O
ATOM 4 OP2 G A1103 -119.677 69.739 179.979 1.00 91.04 O
ATOM 5 O5' G A1103 -119.041 71.715 181.410 1.00 91.04 O
ATOM 6 C5' G A1103 -118.115 72.550 182.089 1.00 91.04 C
ATOM 7 C4' G A1103 -117.972 73.888 181.408 1.00 91.04 C
ATOM 8 O4' G A1103 -118.193 73.730 179.976 1.00 91.04 O
ATOM 9 C3' G A1103 -118.951 74.962 181.869 1.00 91.04 C
ATOM 10 O3' G A1103 -118.306 76.231 181.828 1.00 91.04 O
ATOM 11 C2' G A1103 -120.034 74.914 180.802 1.00 91.04 C
ATOM 12 O2' G A1103 -120.787 76.104 180.676 1.00 91.04 O
ATOM 13 C1' G A1103 -119.205 74.625 179.554 1.00 91.04 C
ATOM 14 N9 G A1103 -119.959 73.995 178.466 1.00 90.73 N
ATOM 15 C8 G A1103 -120.621 72.798 178.553 1.00 90.73 C
ATOM 16 N7 G A1103 -121.226 72.460 177.446 1.00 90.73 N
ATOM 17 C5 G A1103 -120.956 73.496 176.558 1.00 90.73 C
ATOM 18 C6 G A1103 -121.352 73.679 175.197 1.00 90.73 C
ATOM 19 O6 G A1103 -122.037 72.954 174.473 1.00 90.73 O
ATOM 20 N1 G A1103 -120.864 74.856 174.665 1.00 90.73 N
ATOM 21 C2 G A1103 -120.098 75.751 175.351 1.00 90.73 C
ATOM 22 N2 G A1103 -119.738 76.831 174.645 1.00 90.73 N
ATOM 23 N3 G A1103 -119.720 75.603 176.623 1.00 90.73 N
ATOM 24 C4 G A1103 -120.173 74.455 177.175 1.00 90.73 C
ATOM 25 P A A1104 -118.003 77.025 183.187 1.00 77.38 P
ATOM 26 OP1 A A1104 -116.522 77.109 183.328 1.00 77.38 O
ATOM 27 OP2 A A1104 -118.789 76.362 184.260 1.00 77.38 O
ATOM 28 O5' A A1104 -118.600 78.473 182.890 1.00 77.38 O
TER
ATOM 1 O3' A B1039 -126.960 78.119 170.491 1.00 90.94 O
ATOM 2 P G B1040 -125.596 78.454 169.691 1.00 85.66 P
ATOM 3 OP1 G B1040 -125.717 79.850 169.184 1.00 85.66 O
ATOM 4 OP2 G B1040 -125.383 77.351 168.709 1.00 85.66 O
ATOM 5 O5' G B1040 -124.481 78.391 170.832 1.00 85.66 O
ATOM 6 C5' G B1040 -123.183 78.947 170.620 1.00 85.66 C
ATOM 7 C4' G B1040 -122.149 78.292 171.499 1.00 85.66 C
ATOM 8 O4' G B1040 -122.653 78.258 172.859 1.00 85.66 O
ATOM 9 C3' G B1040 -121.812 76.850 171.133 1.00 85.66 C
ATOM 10 O3' G B1040 -120.442 76.570 171.444 1.00 85.66 O
ATOM 11 C2' G B1040 -122.734 76.048 172.045 1.00 85.66 C
ATOM 12 O2' G B1040 -122.297 74.736 172.330 1.00 85.66 O
ATOM 13 C1' G B1040 -122.780 76.920 173.298 1.00 85.66 C
ATOM 14 N9 G B1040 -124.035 76.811 174.036 1.00 84.82 N
ATOM 15 C8 G B1040 -125.288 77.046 173.527 1.00 84.82 C
ATOM 16 N7 G B1040 -126.225 76.860 174.404 1.00 84.82 N
ATOM 17 C5 G B1040 -125.547 76.484 175.557 1.00 84.82 C
ATOM 18 C6 G B1040 -126.034 76.145 176.846 1.00 84.82 C
ATOM 19 O6 G B1040 -127.206 76.124 177.241 1.00 84.82 O
ATOM 20 N1 G B1040 -125.012 75.825 177.733 1.00 84.82 N
ATOM 21 C2 G B1040 -123.683 75.819 177.428 1.00 84.82 C
ATOM 22 N2 G B1040 -122.867 75.481 178.433 1.00 84.82 N
ATOM 23 N3 G B1040 -123.209 76.124 176.229 1.00 84.82 N
ATOM 24 C4 G B1040 -124.190 76.445 175.349 1.00 84.82 C
ATOM 25 P A B1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 26 OP1 A B1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 27 OP2 A B1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 28 O5' A B1041 -118.954 78.076 170.096 1.00 71.12 O
TER
ATOM 2 P G A1103 -118.582 70.317 180.800 1.00 91.04 P
ATOM 3 OP1 G A1103 -117.973 69.480 181.865 1.00 91.04 O
ATOM 4 OP2 G A1103 -119.677 69.739 179.979 1.00 91.04 O
ATOM 5 O5' G A1103 -119.041 71.715 181.410 1.00 91.04 O
ATOM 6 C5' G A1103 -118.115 72.550 182.089 1.00 91.04 C
ATOM 7 C4' G A1103 -117.972 73.888 181.408 1.00 91.04 C
ATOM 8 O4' G A1103 -118.193 73.730 179.976 1.00 91.04 O
ATOM 9 C3' G A1103 -118.951 74.962 181.869 1.00 91.04 C
ATOM 10 O3' G A1103 -118.306 76.231 181.828 1.00 91.04 O
ATOM 11 C2' G A1103 -120.034 74.914 180.802 1.00 91.04 C
ATOM 12 O2' G A1103 -120.787 76.104 180.676 1.00 91.04 O
ATOM 13 C1' G A1103 -119.205 74.625 179.554 1.00 91.04 C
ATOM 14 N9 G A1103 -119.959 73.995 178.466 1.00 90.73 N
ATOM 15 C8 G A1103 -120.621 72.798 178.553 1.00 90.73 C
ATOM 16 N7 G A1103 -121.226 72.460 177.446 1.00 90.73 N
ATOM 17 C5 G A1103 -120.956 73.496 176.558 1.00 90.73 C
ATOM 18 C6 G A1103 -121.352 73.679 175.197 1.00 90.73 C
ATOM 19 O6 G A1103 -122.037 72.954 174.473 1.00 90.73 O
ATOM 20 N1 G A1103 -120.864 74.856 174.665 1.00 90.73 N
ATOM 21 C2 G A1103 -120.098 75.751 175.351 1.00 90.73 C
ATOM 22 N2 G A1103 -119.738 76.831 174.645 1.00 90.73 N
ATOM 23 N3 G A1103 -119.720 75.603 176.623 1.00 90.73 N
ATOM 24 C4 G A1103 -120.173 74.455 177.175 1.00 90.73 C
ATOM 25 P A A1104 -118.003 77.025 183.187 1.00 77.38 P
ATOM 26 OP1 A A1104 -116.522 77.109 183.328 1.00 77.38 O
ATOM 27 OP2 A A1104 -118.789 76.362 184.260 1.00 77.38 O
ATOM 28 O5' A A1104 -118.600 78.473 182.890 1.00 77.38 O
TER
ATOM 1 O3' A B1039 -126.960 78.119 170.491 1.00 90.94 O
ATOM 2 P G B1040 -125.596 78.454 169.691 1.00 85.66 P
ATOM 3 OP1 G B1040 -125.717 79.850 169.184 1.00 85.66 O
ATOM 4 OP2 G B1040 -125.383 77.351 168.709 1.00 85.66 O
ATOM 5 O5' G B1040 -124.481 78.391 170.832 1.00 85.66 O
ATOM 6 C5' G B1040 -123.183 78.947 170.620 1.00 85.66 C
ATOM 7 C4' G B1040 -122.149 78.292 171.499 1.00 85.66 C
ATOM 8 O4' G B1040 -122.653 78.258 172.859 1.00 85.66 O
ATOM 9 C3' G B1040 -121.812 76.850 171.133 1.00 85.66 C
ATOM 10 O3' G B1040 -120.442 76.570 171.444 1.00 85.66 O
ATOM 11 C2' G B1040 -122.734 76.048 172.045 1.00 85.66 C
ATOM 12 O2' G B1040 -122.297 74.736 172.330 1.00 85.66 O
ATOM 13 C1' G B1040 -122.780 76.920 173.298 1.00 85.66 C
ATOM 14 N9 G B1040 -124.035 76.811 174.036 1.00 84.82 N
ATOM 15 C8 G B1040 -125.288 77.046 173.527 1.00 84.82 C
ATOM 16 N7 G B1040 -126.225 76.860 174.404 1.00 84.82 N
ATOM 17 C5 G B1040 -125.547 76.484 175.557 1.00 84.82 C
ATOM 18 C6 G B1040 -126.034 76.145 176.846 1.00 84.82 C
ATOM 19 O6 G B1040 -127.206 76.124 177.241 1.00 84.82 O
ATOM 20 N1 G B1040 -125.012 75.825 177.733 1.00 84.82 N
ATOM 21 C2 G B1040 -123.683 75.819 177.428 1.00 84.82 C
ATOM 22 N2 G B1040 -122.867 75.481 178.433 1.00 84.82 N
ATOM 23 N3 G B1040 -123.209 76.124 176.229 1.00 84.82 N
ATOM 24 C4 G B1040 -124.190 76.445 175.349 1.00 84.82 C
ATOM 25 P A B1041 -119.327 76.539 170.270 1.00 71.12 P
ATOM 26 OP1 A B1041 -119.993 76.047 169.041 1.00 71.12 O
ATOM 27 OP2 A B1041 -118.143 75.787 170.796 1.00 71.12 O
ATOM 28 O5' A B1041 -118.954 78.076 170.096 1.00 71.12 O
TER
Atoms:
OP1: (-117.973,69.480,181.865)
OP2: (-119.677,69.739,179.979)
C3': (-118.951,74.962,181.869)
C1': (-119.205,74.625,179.554)
C5': (-118.115,72.550,182.089)
O6: (-122.037,72.954,174.473)
O4': (-118.193,73.730,179.976)
C8: (-120.621,72.798,178.553)
C2: (-120.098,75.751,175.351)
C6: (-121.352,73.679,175.197)
C5: (-120.956,73.496,176.558)
C4: (-120.173,74.455,177.175)
P: (-118.582,70.317,180.800)
C4': (-117.972,73.888,181.408)
C2': (-120.034,74.914,180.802)
O2': (-120.787,76.104,180.676)
N1: (-120.864,74.856,174.665)
N2: (-119.738,76.831,174.645)
N3: (-119.720,75.603,176.623)
N7: (-121.226,72.460,177.446)
N9: (-119.959,73.995,178.466)
O5': (-119.041,71.715,181.410)
O3': (-118.306,76.231,181.828)
OP2: (-119.677,69.739,179.979)
C3': (-118.951,74.962,181.869)
C1': (-119.205,74.625,179.554)
C5': (-118.115,72.550,182.089)
O6: (-122.037,72.954,174.473)
O4': (-118.193,73.730,179.976)
C8: (-120.621,72.798,178.553)
C2: (-120.098,75.751,175.351)
C6: (-121.352,73.679,175.197)
C5: (-120.956,73.496,176.558)
C4: (-120.173,74.455,177.175)
P: (-118.582,70.317,180.800)
C4': (-117.972,73.888,181.408)
C2': (-120.034,74.914,180.802)
O2': (-120.787,76.104,180.676)
N1: (-120.864,74.856,174.665)
N2: (-119.738,76.831,174.645)
N3: (-119.720,75.603,176.623)
N7: (-121.226,72.460,177.446)
N9: (-119.959,73.995,178.466)
O5': (-119.041,71.715,181.410)
O3': (-118.306,76.231,181.828)
OP1: (-125.717,79.850,169.184)
OP2: (-125.383,77.351,168.709)
C3': (-121.812,76.850,171.133)
C1': (-122.780,76.920,173.298)
C5': (-123.183,78.947,170.620)
O6: (-127.206,76.124,177.241)
O4': (-122.653,78.258,172.859)
C8: (-125.288,77.046,173.527)
C2: (-123.683,75.819,177.428)
C6: (-126.034,76.145,176.846)
C5: (-125.547,76.484,175.557)
C4: (-124.190,76.445,175.349)
P: (-125.596,78.454,169.691)
C4': (-122.149,78.292,171.499)
C2': (-122.734,76.048,172.045)
O2': (-122.297,74.736,172.330)
N1: (-125.012,75.825,177.733)
N2: (-122.867,75.481,178.433)
N3: (-123.209,76.124,176.229)
N7: (-126.225,76.860,174.404)
N9: (-124.035,76.811,174.036)
O5': (-124.481,78.391,170.832)
O3': (-120.442,76.570,171.444)
OP2: (-125.383,77.351,168.709)
C3': (-121.812,76.850,171.133)
C1': (-122.780,76.920,173.298)
C5': (-123.183,78.947,170.620)
O6: (-127.206,76.124,177.241)
O4': (-122.653,78.258,172.859)
C8: (-125.288,77.046,173.527)
C2: (-123.683,75.819,177.428)
C6: (-126.034,76.145,176.846)
C5: (-125.547,76.484,175.557)
C4: (-124.190,76.445,175.349)
P: (-125.596,78.454,169.691)
C4': (-122.149,78.292,171.499)
C2': (-122.734,76.048,172.045)
O2': (-122.297,74.736,172.330)
N1: (-125.012,75.825,177.733)
N2: (-122.867,75.481,178.433)
N3: (-123.209,76.124,176.229)
N7: (-126.225,76.860,174.404)
N9: (-124.035,76.811,174.036)
O5': (-124.481,78.391,170.832)
O3': (-120.442,76.570,171.444)
Image (generated by PyMOL):