Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11229:11166
Extra
PDB:
ATOM 1 O3' C A1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 2 P G A1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G A1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G A1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G A1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G A1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G A1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G A1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G A1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G A1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G A1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G A1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G A1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G A1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G A1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G A1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G A1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G A1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G A1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G A1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G A1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G A1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G A1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G A1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
TER
ATOM 1 O3' A B1165 20.064 -3.573 -32.215 1.00143.52 O
ATOM 2 P G B1166 19.128 -2.685 -31.226 1.00157.84 P
ATOM 3 OP1 G B1166 18.036 -3.569 -30.741 1.00158.76 O
ATOM 4 OP2 G B1166 18.759 -1.458 -31.967 1.00158.02 O
ATOM 5 O5' G B1166 20.105 -2.307 -30.018 1.00157.05 O
ATOM 6 C5' G B1166 20.968 -1.179 -30.112 1.00156.29 C
ATOM 7 C4' G B1166 21.069 -0.408 -28.824 1.00156.14 C
ATOM 8 O4' G B1166 22.436 0.036 -28.687 1.00155.05 O
ATOM 9 C3' G B1166 20.248 0.864 -28.797 1.00156.66 C
ATOM 10 O3' G B1166 20.130 1.322 -27.446 1.00156.71 O
ATOM 11 C2' G B1166 21.149 1.806 -29.575 1.00155.89 C
ATOM 12 O2' G B1166 20.894 3.173 -29.360 1.00155.97 O
ATOM 13 C1' G B1166 22.536 1.397 -29.069 1.00154.86 C
ATOM 14 N9 G B1166 23.571 1.477 -30.092 1.00154.06 N
ATOM 15 C8 G B1166 23.547 0.772 -31.267 1.00154.14 C
ATOM 16 N7 G B1166 24.589 0.991 -32.014 1.00153.33 N
ATOM 17 C5 G B1166 25.352 1.891 -31.281 1.00152.66 C
ATOM 18 C6 G B1166 26.601 2.493 -31.594 1.00151.66 C
ATOM 19 O6 G B1166 27.300 2.342 -32.613 1.00151.14 O
ATOM 20 N1 G B1166 27.009 3.344 -30.562 1.00151.27 N
ATOM 21 C2 G B1166 26.316 3.588 -29.396 1.00151.77 C
ATOM 22 N2 G B1166 26.883 4.441 -28.533 1.00151.27 N
ATOM 23 N3 G B1166 25.154 3.033 -29.099 1.00152.71 N
ATOM 24 C4 G B1166 24.738 2.200 -30.079 1.00153.10 C
ATOM 25 P A B1167 18.716 1.847 -26.880 1.00108.54 P
ATOM 26 OP1 A B1167 17.658 1.295 -27.773 1.00109.40 O
ATOM 27 OP2 A B1167 18.821 3.318 -26.719 1.00108.33 O
ATOM 28 O5' A B1167 18.630 1.157 -25.450 1.00108.66 O
TER
ATOM 2 P G A1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G A1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G A1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G A1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G A1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G A1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G A1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G A1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G A1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G A1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G A1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G A1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G A1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G A1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G A1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G A1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G A1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G A1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G A1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G A1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G A1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G A1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G A1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
TER
ATOM 1 O3' A B1165 20.064 -3.573 -32.215 1.00143.52 O
ATOM 2 P G B1166 19.128 -2.685 -31.226 1.00157.84 P
ATOM 3 OP1 G B1166 18.036 -3.569 -30.741 1.00158.76 O
ATOM 4 OP2 G B1166 18.759 -1.458 -31.967 1.00158.02 O
ATOM 5 O5' G B1166 20.105 -2.307 -30.018 1.00157.05 O
ATOM 6 C5' G B1166 20.968 -1.179 -30.112 1.00156.29 C
ATOM 7 C4' G B1166 21.069 -0.408 -28.824 1.00156.14 C
ATOM 8 O4' G B1166 22.436 0.036 -28.687 1.00155.05 O
ATOM 9 C3' G B1166 20.248 0.864 -28.797 1.00156.66 C
ATOM 10 O3' G B1166 20.130 1.322 -27.446 1.00156.71 O
ATOM 11 C2' G B1166 21.149 1.806 -29.575 1.00155.89 C
ATOM 12 O2' G B1166 20.894 3.173 -29.360 1.00155.97 O
ATOM 13 C1' G B1166 22.536 1.397 -29.069 1.00154.86 C
ATOM 14 N9 G B1166 23.571 1.477 -30.092 1.00154.06 N
ATOM 15 C8 G B1166 23.547 0.772 -31.267 1.00154.14 C
ATOM 16 N7 G B1166 24.589 0.991 -32.014 1.00153.33 N
ATOM 17 C5 G B1166 25.352 1.891 -31.281 1.00152.66 C
ATOM 18 C6 G B1166 26.601 2.493 -31.594 1.00151.66 C
ATOM 19 O6 G B1166 27.300 2.342 -32.613 1.00151.14 O
ATOM 20 N1 G B1166 27.009 3.344 -30.562 1.00151.27 N
ATOM 21 C2 G B1166 26.316 3.588 -29.396 1.00151.77 C
ATOM 22 N2 G B1166 26.883 4.441 -28.533 1.00151.27 N
ATOM 23 N3 G B1166 25.154 3.033 -29.099 1.00152.71 N
ATOM 24 C4 G B1166 24.738 2.200 -30.079 1.00153.10 C
ATOM 25 P A B1167 18.716 1.847 -26.880 1.00108.54 P
ATOM 26 OP1 A B1167 17.658 1.295 -27.773 1.00109.40 O
ATOM 27 OP2 A B1167 18.821 3.318 -26.719 1.00108.33 O
ATOM 28 O5' A B1167 18.630 1.157 -25.450 1.00108.66 O
TER
Atoms:
OP1: (25.724,12.651,-28.727)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
OP1: (18.036,-3.569,-30.741)
OP2: (18.759,-1.458,-31.967)
C3': (20.248,0.864,-28.797)
C1': (22.536,1.397,-29.069)
C5': (20.968,-1.179,-30.112)
O6: (27.300,2.342,-32.613)
O4': (22.436,0.036,-28.687)
C8: (23.547,0.772,-31.267)
C2: (26.316,3.588,-29.396)
C6: (26.601,2.493,-31.594)
C5: (25.352,1.891,-31.281)
C4: (24.738,2.200,-30.079)
P: (19.128,-2.685,-31.226)
C4': (21.069,-0.408,-28.824)
C2': (21.149,1.806,-29.575)
O2': (20.894,3.173,-29.360)
N1: (27.009,3.344,-30.562)
N2: (26.883,4.441,-28.533)
N3: (25.154,3.033,-29.099)
N7: (24.589,0.991,-32.014)
N9: (23.571,1.477,-30.092)
O5': (20.105,-2.307,-30.018)
O3': (20.130,1.322,-27.446)
OP2: (18.759,-1.458,-31.967)
C3': (20.248,0.864,-28.797)
C1': (22.536,1.397,-29.069)
C5': (20.968,-1.179,-30.112)
O6: (27.300,2.342,-32.613)
O4': (22.436,0.036,-28.687)
C8: (23.547,0.772,-31.267)
C2: (26.316,3.588,-29.396)
C6: (26.601,2.493,-31.594)
C5: (25.352,1.891,-31.281)
C4: (24.738,2.200,-30.079)
P: (19.128,-2.685,-31.226)
C4': (21.069,-0.408,-28.824)
C2': (21.149,1.806,-29.575)
O2': (20.894,3.173,-29.360)
N1: (27.009,3.344,-30.562)
N2: (26.883,4.441,-28.533)
N3: (25.154,3.033,-29.099)
N7: (24.589,0.991,-32.014)
N9: (23.571,1.477,-30.092)
O5': (20.105,-2.307,-30.018)
O3': (20.130,1.322,-27.446)
Image (generated by PyMOL):