Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12171:12203
Extra
PDB:
ATOM 1 O3' A A2170 55.365 19.422 55.270 1.00 38.66 O
ATOM 2 P G A2171 54.842 20.942 55.239 1.00 40.12 P
ATOM 3 OP1 G A2171 55.889 21.734 54.507 1.00 40.34 O
ATOM 4 OP2 G A2171 54.477 21.340 56.603 1.00 40.12 O
ATOM 5 O5' G A2171 53.545 20.828 54.345 1.00 40.10 O
ATOM 6 C5' G A2171 53.658 20.461 52.981 1.00 40.11 C
ATOM 7 C4' G A2171 52.346 20.073 52.449 1.00 40.04 C
ATOM 8 O4' G A2171 51.696 19.285 53.459 1.00 39.83 O
ATOM 9 C3' G A2171 51.413 21.244 52.165 1.00 40.25 C
ATOM 10 O3' G A2171 50.530 20.911 51.126 1.00 40.25 O
ATOM 11 C2' G A2171 50.620 21.349 53.430 1.00 40.17 C
ATOM 12 O2' G A2171 49.367 21.966 53.272 1.00 40.28 O
ATOM 13 C1' G A2171 50.476 19.888 53.802 1.00 39.89 C
ATOM 14 N9 G A2171 50.238 19.714 55.201 1.00 39.78 N
ATOM 15 C8 G A2171 50.974 20.221 56.221 1.00 39.84 C
ATOM 16 N7 G A2171 50.416 19.988 57.378 1.00 39.74 N
ATOM 17 C5 G A2171 49.233 19.359 57.040 1.00 39.62 C
ATOM 18 C6 G A2171 48.230 18.893 57.855 1.00 39.50 C
ATOM 19 O6 G A2171 48.241 18.965 59.055 1.00 39.48 O
ATOM 20 N1 G A2171 47.217 18.301 57.152 1.00 39.42 N
ATOM 21 C2 G A2171 47.210 18.183 55.779 1.00 39.46 C
ATOM 22 N2 G A2171 46.186 17.542 55.187 1.00 39.39 N
ATOM 23 N3 G A2171 48.169 18.648 54.990 1.00 39.59 N
ATOM 24 C4 G A2171 49.121 19.209 55.701 1.00 39.66 C
ATOM 25 P C A2172 50.806 21.424 49.655 1.00 38.05 P
ATOM 26 OP1 C A2172 51.543 20.310 48.954 1.00 37.93 O
ATOM 27 OP2 C A2172 51.425 22.790 49.736 1.00 38.31 O
ATOM 28 O5' C A2172 49.354 21.524 49.042 1.00 38.11 O
TER
ATOM 1 O3' G B2202 37.909 15.663 54.577 1.00 32.25 O
ATOM 2 P G B2203 38.254 14.774 55.872 1.00 39.86 P
ATOM 3 OP1 G B2203 38.318 13.397 55.416 1.00 39.69 O
ATOM 4 OP2 G B2203 37.288 15.133 56.935 1.00 39.89 O
ATOM 5 O5' G B2203 39.705 15.268 56.285 1.00 39.86 O
ATOM 6 C5' G B2203 40.844 14.788 55.606 1.00 39.80 C
ATOM 7 C4' G B2203 42.108 15.379 56.150 1.00 39.83 C
ATOM 8 O4' G B2203 41.957 16.776 56.367 1.00 40.04 O
ATOM 9 C3' G B2203 42.559 14.870 57.478 1.00 39.69 C
ATOM 10 O3' G B2203 43.122 13.590 57.341 1.00 39.51 O
ATOM 11 C2' G B2203 43.569 15.963 57.893 1.00 39.82 C
ATOM 12 O2' G B2203 44.856 15.780 57.277 1.00 39.81 O
ATOM 13 C1' G B2203 42.947 17.212 57.278 1.00 40.05 C
ATOM 14 N9 G B2203 42.337 18.096 58.296 1.00 40.16 N
ATOM 15 C8 G B2203 41.018 18.115 58.600 1.00 40.18 C
ATOM 16 N7 G B2203 40.720 18.972 59.516 1.00 40.30 N
ATOM 17 C5 G B2203 41.914 19.554 59.879 1.00 40.37 C
ATOM 18 C6 G B2203 42.171 20.569 60.854 1.00 40.52 C
ATOM 19 O6 G B2203 41.394 21.157 61.622 1.00 40.63 O
ATOM 20 N1 G B2203 43.520 20.882 60.879 1.00 40.56 N
ATOM 21 C2 G B2203 44.455 20.302 60.069 1.00 40.47 C
ATOM 22 N2 G B2203 45.691 20.750 60.218 1.00 40.54 N
ATOM 23 N3 G B2203 44.201 19.358 59.165 1.00 40.32 N
ATOM 24 C4 G B2203 42.913 19.025 59.115 1.00 40.28 C
ATOM 25 P A B2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 26 OP1 A B2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 27 OP2 A B2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 28 O5' A B2204 41.291 12.141 58.227 1.00 65.03 O
TER
ATOM 2 P G A2171 54.842 20.942 55.239 1.00 40.12 P
ATOM 3 OP1 G A2171 55.889 21.734 54.507 1.00 40.34 O
ATOM 4 OP2 G A2171 54.477 21.340 56.603 1.00 40.12 O
ATOM 5 O5' G A2171 53.545 20.828 54.345 1.00 40.10 O
ATOM 6 C5' G A2171 53.658 20.461 52.981 1.00 40.11 C
ATOM 7 C4' G A2171 52.346 20.073 52.449 1.00 40.04 C
ATOM 8 O4' G A2171 51.696 19.285 53.459 1.00 39.83 O
ATOM 9 C3' G A2171 51.413 21.244 52.165 1.00 40.25 C
ATOM 10 O3' G A2171 50.530 20.911 51.126 1.00 40.25 O
ATOM 11 C2' G A2171 50.620 21.349 53.430 1.00 40.17 C
ATOM 12 O2' G A2171 49.367 21.966 53.272 1.00 40.28 O
ATOM 13 C1' G A2171 50.476 19.888 53.802 1.00 39.89 C
ATOM 14 N9 G A2171 50.238 19.714 55.201 1.00 39.78 N
ATOM 15 C8 G A2171 50.974 20.221 56.221 1.00 39.84 C
ATOM 16 N7 G A2171 50.416 19.988 57.378 1.00 39.74 N
ATOM 17 C5 G A2171 49.233 19.359 57.040 1.00 39.62 C
ATOM 18 C6 G A2171 48.230 18.893 57.855 1.00 39.50 C
ATOM 19 O6 G A2171 48.241 18.965 59.055 1.00 39.48 O
ATOM 20 N1 G A2171 47.217 18.301 57.152 1.00 39.42 N
ATOM 21 C2 G A2171 47.210 18.183 55.779 1.00 39.46 C
ATOM 22 N2 G A2171 46.186 17.542 55.187 1.00 39.39 N
ATOM 23 N3 G A2171 48.169 18.648 54.990 1.00 39.59 N
ATOM 24 C4 G A2171 49.121 19.209 55.701 1.00 39.66 C
ATOM 25 P C A2172 50.806 21.424 49.655 1.00 38.05 P
ATOM 26 OP1 C A2172 51.543 20.310 48.954 1.00 37.93 O
ATOM 27 OP2 C A2172 51.425 22.790 49.736 1.00 38.31 O
ATOM 28 O5' C A2172 49.354 21.524 49.042 1.00 38.11 O
TER
ATOM 1 O3' G B2202 37.909 15.663 54.577 1.00 32.25 O
ATOM 2 P G B2203 38.254 14.774 55.872 1.00 39.86 P
ATOM 3 OP1 G B2203 38.318 13.397 55.416 1.00 39.69 O
ATOM 4 OP2 G B2203 37.288 15.133 56.935 1.00 39.89 O
ATOM 5 O5' G B2203 39.705 15.268 56.285 1.00 39.86 O
ATOM 6 C5' G B2203 40.844 14.788 55.606 1.00 39.80 C
ATOM 7 C4' G B2203 42.108 15.379 56.150 1.00 39.83 C
ATOM 8 O4' G B2203 41.957 16.776 56.367 1.00 40.04 O
ATOM 9 C3' G B2203 42.559 14.870 57.478 1.00 39.69 C
ATOM 10 O3' G B2203 43.122 13.590 57.341 1.00 39.51 O
ATOM 11 C2' G B2203 43.569 15.963 57.893 1.00 39.82 C
ATOM 12 O2' G B2203 44.856 15.780 57.277 1.00 39.81 O
ATOM 13 C1' G B2203 42.947 17.212 57.278 1.00 40.05 C
ATOM 14 N9 G B2203 42.337 18.096 58.296 1.00 40.16 N
ATOM 15 C8 G B2203 41.018 18.115 58.600 1.00 40.18 C
ATOM 16 N7 G B2203 40.720 18.972 59.516 1.00 40.30 N
ATOM 17 C5 G B2203 41.914 19.554 59.879 1.00 40.37 C
ATOM 18 C6 G B2203 42.171 20.569 60.854 1.00 40.52 C
ATOM 19 O6 G B2203 41.394 21.157 61.622 1.00 40.63 O
ATOM 20 N1 G B2203 43.520 20.882 60.879 1.00 40.56 N
ATOM 21 C2 G B2203 44.455 20.302 60.069 1.00 40.47 C
ATOM 22 N2 G B2203 45.691 20.750 60.218 1.00 40.54 N
ATOM 23 N3 G B2203 44.201 19.358 59.165 1.00 40.32 N
ATOM 24 C4 G B2203 42.913 19.025 59.115 1.00 40.28 C
ATOM 25 P A B2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 26 OP1 A B2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 27 OP2 A B2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 28 O5' A B2204 41.291 12.141 58.227 1.00 65.03 O
TER
Atoms:
OP1: (55.889,21.734,54.507)
OP2: (54.477,21.340,56.603)
C3': (51.413,21.244,52.165)
C1': (50.476,19.888,53.802)
C5': (53.658,20.461,52.981)
O6: (48.241,18.965,59.055)
O4': (51.696,19.285,53.459)
C8: (50.974,20.221,56.221)
C2: (47.210,18.183,55.779)
C6: (48.230,18.893,57.855)
C5: (49.233,19.359,57.040)
C4: (49.121,19.209,55.701)
P: (54.842,20.942,55.239)
C4': (52.346,20.073,52.449)
C2': (50.620,21.349,53.430)
O2': (49.367,21.966,53.272)
N1: (47.217,18.301,57.152)
N2: (46.186,17.542,55.187)
N3: (48.169,18.648,54.990)
N7: (50.416,19.988,57.378)
N9: (50.238,19.714,55.201)
O5': (53.545,20.828,54.345)
O3': (50.530,20.911,51.126)
OP2: (54.477,21.340,56.603)
C3': (51.413,21.244,52.165)
C1': (50.476,19.888,53.802)
C5': (53.658,20.461,52.981)
O6: (48.241,18.965,59.055)
O4': (51.696,19.285,53.459)
C8: (50.974,20.221,56.221)
C2: (47.210,18.183,55.779)
C6: (48.230,18.893,57.855)
C5: (49.233,19.359,57.040)
C4: (49.121,19.209,55.701)
P: (54.842,20.942,55.239)
C4': (52.346,20.073,52.449)
C2': (50.620,21.349,53.430)
O2': (49.367,21.966,53.272)
N1: (47.217,18.301,57.152)
N2: (46.186,17.542,55.187)
N3: (48.169,18.648,54.990)
N7: (50.416,19.988,57.378)
N9: (50.238,19.714,55.201)
O5': (53.545,20.828,54.345)
O3': (50.530,20.911,51.126)
OP1: (38.318,13.397,55.416)
OP2: (37.288,15.133,56.935)
C3': (42.559,14.870,57.478)
C1': (42.947,17.212,57.278)
C5': (40.844,14.788,55.606)
O6: (41.394,21.157,61.622)
O4': (41.957,16.776,56.367)
C8: (41.018,18.115,58.600)
C2: (44.455,20.302,60.069)
C6: (42.171,20.569,60.854)
C5: (41.914,19.554,59.879)
C4: (42.913,19.025,59.115)
P: (38.254,14.774,55.872)
C4': (42.108,15.379,56.150)
C2': (43.569,15.963,57.893)
O2': (44.856,15.780,57.277)
N1: (43.520,20.882,60.879)
N2: (45.691,20.750,60.218)
N3: (44.201,19.358,59.165)
N7: (40.720,18.972,59.516)
N9: (42.337,18.096,58.296)
O5': (39.705,15.268,56.285)
O3': (43.122,13.590,57.341)
OP2: (37.288,15.133,56.935)
C3': (42.559,14.870,57.478)
C1': (42.947,17.212,57.278)
C5': (40.844,14.788,55.606)
O6: (41.394,21.157,61.622)
O4': (41.957,16.776,56.367)
C8: (41.018,18.115,58.600)
C2: (44.455,20.302,60.069)
C6: (42.171,20.569,60.854)
C5: (41.914,19.554,59.879)
C4: (42.913,19.025,59.115)
P: (38.254,14.774,55.872)
C4': (42.108,15.379,56.150)
C2': (43.569,15.963,57.893)
O2': (44.856,15.780,57.277)
N1: (43.520,20.882,60.879)
N2: (45.691,20.750,60.218)
N3: (44.201,19.358,59.165)
N7: (40.720,18.972,59.516)
N9: (42.337,18.096,58.296)
O5': (39.705,15.268,56.285)
O3': (43.122,13.590,57.341)
Image (generated by PyMOL):