Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02377:02326
Extra
PDB:
ATOM 1 O3' U A2376 55.946 116.805 94.394 1.00 42.72 O
ATOM 2 P C A2377 56.346 116.260 92.940 1.00 44.95 P
ATOM 3 OP1 C A2377 55.755 117.210 91.965 1.00 45.48 O
ATOM 4 OP2 C A2377 56.005 114.818 92.861 1.00 45.01 O
ATOM 5 O5' C A2377 57.931 116.391 92.862 1.00 42.50 O
ATOM 6 C5' C A2377 58.580 117.674 92.893 1.00 40.98 C
ATOM 7 C4' C A2377 60.001 117.549 92.396 1.00 41.09 C
ATOM 8 O4' C A2377 60.618 116.416 93.025 1.00 41.73 O
ATOM 9 C3' C A2377 60.160 117.206 90.923 1.00 40.18 C
ATOM 10 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 11 C2' C A2377 61.491 116.443 90.846 1.00 39.91 C
ATOM 12 O2' C A2377 62.526 117.220 90.288 1.00 41.64 O
ATOM 13 C1' C A2377 61.795 116.138 92.318 1.00 40.46 C
ATOM 14 N1 C A2377 62.245 114.774 92.656 1.00 39.37 N
ATOM 15 C2 C A2377 63.378 114.622 93.460 1.00 36.92 C
ATOM 16 O2 C A2377 63.961 115.631 93.875 1.00 35.18 O
ATOM 17 N3 C A2377 63.809 113.383 93.765 1.00 36.32 N
ATOM 18 C4 C A2377 63.157 112.317 93.307 1.00 36.76 C
ATOM 19 N4 C A2377 63.633 111.114 93.619 1.00 35.90 N
ATOM 20 C5 C A2377 61.994 112.437 92.501 1.00 38.59 C
ATOM 21 C6 C A2377 61.576 113.672 92.198 1.00 39.73 C
ATOM 22 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 23 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 24 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 25 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
TER
ATOM 1 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 2 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 3 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 4 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 5 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
ATOM 6 C5' A B2326 66.508 106.414 98.549 1.00 34.00 C
ATOM 7 C4' A B2326 67.806 107.187 98.442 1.00 35.36 C
ATOM 8 O4' A B2326 68.007 107.654 97.085 1.00 35.62 O
ATOM 9 C3' A B2326 67.950 108.448 99.275 1.00 36.61 C
ATOM 10 O3' A B2326 68.275 108.184 100.627 1.00 38.95 O
ATOM 11 C2' A B2326 69.090 109.155 98.561 1.00 36.80 C
ATOM 12 O2' A B2326 70.353 108.587 98.839 1.00 38.88 O
ATOM 13 C1' A B2326 68.738 108.870 97.105 1.00 36.13 C
ATOM 14 N9 A B2326 67.895 109.931 96.562 1.00 35.59 N
ATOM 15 C8 A B2326 66.577 109.873 96.198 1.00 36.21 C
ATOM 16 N7 A B2326 66.104 111.006 95.751 1.00 36.72 N
ATOM 17 C5 A B2326 67.184 111.872 95.826 1.00 36.02 C
ATOM 18 C6 A B2326 67.340 113.223 95.482 1.00 35.40 C
ATOM 19 N6 A B2326 66.367 113.971 94.974 1.00 35.44 N
ATOM 20 N1 A B2326 68.549 113.787 95.675 1.00 37.12 N
ATOM 21 C2 A B2326 69.532 113.033 96.172 1.00 37.73 C
ATOM 22 N3 A B2326 69.512 111.750 96.525 1.00 38.24 N
ATOM 23 C4 A B2326 68.293 111.222 96.324 1.00 36.38 C
ATOM 24 P A B2327 67.993 109.308 101.738 1.00 40.42 P
ATOM 25 OP1 A B2327 68.517 108.775 103.023 1.00 38.82 O
ATOM 26 OP2 A B2327 66.572 109.720 101.644 1.00 39.10 O
ATOM 27 O5' A B2327 68.871 110.548 101.250 1.00 41.06 O
TER
ATOM 2 P C A2377 56.346 116.260 92.940 1.00 44.95 P
ATOM 3 OP1 C A2377 55.755 117.210 91.965 1.00 45.48 O
ATOM 4 OP2 C A2377 56.005 114.818 92.861 1.00 45.01 O
ATOM 5 O5' C A2377 57.931 116.391 92.862 1.00 42.50 O
ATOM 6 C5' C A2377 58.580 117.674 92.893 1.00 40.98 C
ATOM 7 C4' C A2377 60.001 117.549 92.396 1.00 41.09 C
ATOM 8 O4' C A2377 60.618 116.416 93.025 1.00 41.73 O
ATOM 9 C3' C A2377 60.160 117.206 90.923 1.00 40.18 C
ATOM 10 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 11 C2' C A2377 61.491 116.443 90.846 1.00 39.91 C
ATOM 12 O2' C A2377 62.526 117.220 90.288 1.00 41.64 O
ATOM 13 C1' C A2377 61.795 116.138 92.318 1.00 40.46 C
ATOM 14 N1 C A2377 62.245 114.774 92.656 1.00 39.37 N
ATOM 15 C2 C A2377 63.378 114.622 93.460 1.00 36.92 C
ATOM 16 O2 C A2377 63.961 115.631 93.875 1.00 35.18 O
ATOM 17 N3 C A2377 63.809 113.383 93.765 1.00 36.32 N
ATOM 18 C4 C A2377 63.157 112.317 93.307 1.00 36.76 C
ATOM 19 N4 C A2377 63.633 111.114 93.619 1.00 35.90 N
ATOM 20 C5 C A2377 61.994 112.437 92.501 1.00 38.59 C
ATOM 21 C6 C A2377 61.576 113.672 92.198 1.00 39.73 C
ATOM 22 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 23 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 24 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 25 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
TER
ATOM 1 O3' U B2325 64.302 106.783 96.261 1.00 35.38 O
ATOM 2 P A B2326 63.998 106.801 97.837 1.00 34.01 P
ATOM 3 OP1 A B2326 63.773 105.397 98.252 1.00 32.33 O
ATOM 4 OP2 A B2326 62.963 107.817 98.114 1.00 32.65 O
ATOM 5 O5' A B2326 65.373 107.298 98.466 1.00 33.70 O
ATOM 6 C5' A B2326 66.508 106.414 98.549 1.00 34.00 C
ATOM 7 C4' A B2326 67.806 107.187 98.442 1.00 35.36 C
ATOM 8 O4' A B2326 68.007 107.654 97.085 1.00 35.62 O
ATOM 9 C3' A B2326 67.950 108.448 99.275 1.00 36.61 C
ATOM 10 O3' A B2326 68.275 108.184 100.627 1.00 38.95 O
ATOM 11 C2' A B2326 69.090 109.155 98.561 1.00 36.80 C
ATOM 12 O2' A B2326 70.353 108.587 98.839 1.00 38.88 O
ATOM 13 C1' A B2326 68.738 108.870 97.105 1.00 36.13 C
ATOM 14 N9 A B2326 67.895 109.931 96.562 1.00 35.59 N
ATOM 15 C8 A B2326 66.577 109.873 96.198 1.00 36.21 C
ATOM 16 N7 A B2326 66.104 111.006 95.751 1.00 36.72 N
ATOM 17 C5 A B2326 67.184 111.872 95.826 1.00 36.02 C
ATOM 18 C6 A B2326 67.340 113.223 95.482 1.00 35.40 C
ATOM 19 N6 A B2326 66.367 113.971 94.974 1.00 35.44 N
ATOM 20 N1 A B2326 68.549 113.787 95.675 1.00 37.12 N
ATOM 21 C2 A B2326 69.532 113.033 96.172 1.00 37.73 C
ATOM 22 N3 A B2326 69.512 111.750 96.525 1.00 38.24 N
ATOM 23 C4 A B2326 68.293 111.222 96.324 1.00 36.38 C
ATOM 24 P A B2327 67.993 109.308 101.738 1.00 40.42 P
ATOM 25 OP1 A B2327 68.517 108.775 103.023 1.00 38.82 O
ATOM 26 OP2 A B2327 66.572 109.720 101.644 1.00 39.10 O
ATOM 27 O5' A B2327 68.871 110.548 101.250 1.00 41.06 O
TER
Atoms:
C2: (63.378,114.622,93.460)
OP1: (55.755,117.210,91.965)
OP2: (56.005,114.818,92.861)
C4: (63.157,112.317,93.307)
O5': (57.931,116.391,92.862)
C3': (60.160,117.206,90.923)
C1': (61.795,116.138,92.318)
O4': (60.618,116.416,93.025)
C5': (58.580,117.674,92.893)
P: (56.346,116.260,92.940)
O2: (63.961,115.631,93.875)
C4': (60.001,117.549,92.396)
C2': (61.491,116.443,90.846)
O2': (62.526,117.220,90.288)
N1: (62.245,114.774,92.656)
N3: (63.809,113.383,93.765)
N4: (63.633,111.114,93.619)
C6: (61.576,113.672,92.198)
C5: (61.994,112.437,92.501)
O3': (60.237,118.418,90.182)
OP1: (55.755,117.210,91.965)
OP2: (56.005,114.818,92.861)
C4: (63.157,112.317,93.307)
O5': (57.931,116.391,92.862)
C3': (60.160,117.206,90.923)
C1': (61.795,116.138,92.318)
O4': (60.618,116.416,93.025)
C5': (58.580,117.674,92.893)
P: (56.346,116.260,92.940)
O2: (63.961,115.631,93.875)
C4': (60.001,117.549,92.396)
C2': (61.491,116.443,90.846)
O2': (62.526,117.220,90.288)
N1: (62.245,114.774,92.656)
N3: (63.809,113.383,93.765)
N4: (63.633,111.114,93.619)
C6: (61.576,113.672,92.198)
C5: (61.994,112.437,92.501)
O3': (60.237,118.418,90.182)
OP1: (63.773,105.397,98.252)
OP2: (62.963,107.817,98.114)
C3': (67.950,108.448,99.275)
C1': (68.738,108.870,97.105)
C5': (66.508,106.414,98.549)
O4': (68.007,107.654,97.085)
C8: (66.577,109.873,96.198)
O2': (70.353,108.587,98.839)
C6: (67.340,113.223,95.482)
C5: (67.184,111.872,95.826)
C4: (68.293,111.222,96.324)
P: (63.998,106.801,97.837)
C4': (67.806,107.187,98.442)
C2': (69.090,109.155,98.561)
C2: (69.532,113.033,96.172)
N1: (68.549,113.787,95.675)
N3: (69.512,111.750,96.525)
N6: (66.367,113.971,94.974)
N7: (66.104,111.006,95.751)
N9: (67.895,109.931,96.562)
O5': (65.373,107.298,98.466)
O3': (68.275,108.184,100.627)
OP2: (62.963,107.817,98.114)
C3': (67.950,108.448,99.275)
C1': (68.738,108.870,97.105)
C5': (66.508,106.414,98.549)
O4': (68.007,107.654,97.085)
C8: (66.577,109.873,96.198)
O2': (70.353,108.587,98.839)
C6: (67.340,113.223,95.482)
C5: (67.184,111.872,95.826)
C4: (68.293,111.222,96.324)
P: (63.998,106.801,97.837)
C4': (67.806,107.187,98.442)
C2': (69.090,109.155,98.561)
C2: (69.532,113.033,96.172)
N1: (68.549,113.787,95.675)
N3: (69.512,111.750,96.525)
N6: (66.367,113.971,94.974)
N7: (66.104,111.006,95.751)
N9: (67.895,109.931,96.562)
O5': (65.373,107.298,98.466)
O3': (68.275,108.184,100.627)
Image (generated by PyMOL):