ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01852:01900

Extra

PDB:
ATOM 1 O3' C A1851 119.400 103.378 88.445 1.00 51.54 O
ATOM 2 P C A1852 119.993 103.389 86.950 1.00 54.32 P
ATOM 3 OP1 C A1852 120.383 101.992 86.619 1.00 53.28 O
ATOM 4 OP2 C A1852 121.000 104.479 86.832 1.00 52.76 O
ATOM 5 O5' C A1852 118.741 103.766 86.041 1.00 54.36 O
ATOM 6 C5' C A1852 117.578 102.925 86.014 1.00 53.27 C
ATOM 7 C4' C A1852 117.144 102.681 84.592 1.00 52.42 C
ATOM 8 O4' C A1852 116.606 103.905 84.023 1.00 52.60 O
ATOM 9 C3' C A1852 118.232 102.214 83.631 1.00 52.42 C
ATOM 10 O3' C A1852 117.631 101.369 82.667 1.00 55.07 O
ATOM 11 C2' C A1852 118.634 103.508 82.932 1.00 52.30 C
ATOM 12 O2' C A1852 119.200 103.288 81.652 1.00 49.60 O
ATOM 13 C1' C A1852 117.272 104.190 82.812 1.00 51.66 C
ATOM 14 N1 C A1852 117.252 105.648 82.598 1.00 50.46 N
ATOM 15 C2 C A1852 116.188 106.197 81.875 1.00 48.81 C
ATOM 16 O2 C A1852 115.313 105.439 81.420 1.00 46.97 O
ATOM 17 N3 C A1852 116.139 107.537 81.688 1.00 48.52 N
ATOM 18 C4 C A1852 117.098 108.317 82.190 1.00 47.90 C
ATOM 19 N4 C A1852 116.998 109.630 81.999 1.00 47.47 N
ATOM 20 C5 C A1852 118.199 107.785 82.916 1.00 48.94 C
ATOM 21 C6 C A1852 118.237 106.457 83.097 1.00 50.41 C
ATOM 22 P A A1853 117.846 99.787 82.753 1.00 55.68 P
ATOM 23 OP1 A A1853 118.965 99.515 83.700 1.00 53.05 O
ATOM 24 OP2 A A1853 117.920 99.294 81.348 1.00 53.15 O
ATOM 25 O5' A A1853 116.494 99.245 83.394 1.00 53.91 O
TER

ATOM 1 O3' A B1899 114.435 118.845 83.032 1.00 46.41 O
ATOM 2 P A B1900 114.369 118.407 81.492 1.00 44.90 P
ATOM 3 OP1 A B1900 115.712 118.254 80.894 1.00 45.61 O
ATOM 4 OP2 A B1900 113.396 119.335 80.865 1.00 46.01 O
ATOM 5 O5' A B1900 113.687 116.971 81.480 1.00 48.28 O
ATOM 6 C5' A B1900 113.051 116.575 80.267 1.00 51.63 C
ATOM 7 C4' A B1900 112.159 115.372 80.423 1.00 48.74 C
ATOM 8 O4' A B1900 112.803 114.155 80.035 1.00 48.55 O
ATOM 9 C3' A B1900 111.369 114.937 81.641 1.00 46.46 C
ATOM 10 O3' A B1900 110.338 115.859 81.997 1.00 46.06 O
ATOM 11 C2' A B1900 110.709 113.696 81.034 1.00 48.39 C
ATOM 12 O2' A B1900 109.681 114.087 80.139 1.00 45.19 O
ATOM 13 C1' A B1900 111.833 113.144 80.140 1.00 49.34 C
ATOM 14 N9 A B1900 112.466 111.890 80.540 1.00 50.01 N
ATOM 15 C8 A B1900 113.723 111.657 81.036 1.00 49.73 C
ATOM 16 N7 A B1900 113.986 110.389 81.228 1.00 51.13 N
ATOM 17 C5 A B1900 112.818 109.745 80.845 1.00 51.10 C
ATOM 18 C6 A B1900 112.453 108.392 80.799 1.00 51.47 C
ATOM 19 N6 A B1900 113.257 107.392 81.158 1.00 51.35 N
ATOM 20 N1 A B1900 111.211 108.094 80.364 1.00 52.71 N
ATOM 21 C2 A B1900 110.398 109.092 80.007 1.00 52.01 C
ATOM 22 N3 A B1900 110.624 110.397 80.006 1.00 50.85 N
ATOM 23 C4 A B1900 111.869 110.660 80.437 1.00 51.00 C
ATOM 24 P C B1901 109.433 115.605 83.318 1.00 43.49 P
ATOM 25 OP1 C B1901 108.553 116.792 83.462 1.00 42.51 O
ATOM 26 OP2 C B1901 110.288 115.193 84.454 1.00 43.63 O
ATOM 27 O5' C B1901 108.519 114.357 82.945 1.00 43.71 O
TER

Atoms:
C2: (116.188,106.197,81.875)
OP1: (120.383,101.992,86.619)
OP2: (121.000,104.479,86.832)
C4: (117.098,108.317,82.190)
O5': (118.741,103.766,86.041)
C3': (118.232,102.214,83.631)
C1': (117.272,104.190,82.812)
O4': (116.606,103.905,84.023)
C5': (117.578,102.925,86.014)
P: (119.993,103.389,86.950)
O2: (115.313,105.439,81.420)
C4': (117.144,102.681,84.592)
C2': (118.634,103.508,82.932)
O2': (119.200,103.288,81.652)
N1: (117.252,105.648,82.598)
N3: (116.139,107.537,81.688)
N4: (116.998,109.630,81.999)
C6: (118.237,106.457,83.097)
C5: (118.199,107.785,82.916)
O3': (117.631,101.369,82.667)
OP1: (115.712,118.254,80.894)
OP2: (113.396,119.335,80.865)
C3': (111.369,114.937,81.641)
C1': (111.833,113.144,80.140)
C5': (113.051,116.575,80.267)
O4': (112.803,114.155,80.035)
C8: (113.723,111.657,81.036)
O2': (109.681,114.087,80.139)
C6: (112.453,108.392,80.799)
C5: (112.818,109.745,80.845)
C4: (111.869,110.660,80.437)
P: (114.369,118.407,81.492)
C4': (112.159,115.372,80.423)
C2': (110.709,113.696,81.034)
C2: (110.398,109.092,80.007)
N1: (111.211,108.094,80.364)
N3: (110.624,110.397,80.006)
N6: (113.257,107.392,81.158)
N7: (113.986,110.389,81.228)
N9: (112.466,111.890,80.540)
O5': (113.687,116.971,81.480)
O3': (110.338,115.859,81.997)
Image (generated by PyMOL):
PyMOL image
show in jmol