Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A320:A327
Extra
PDB:
ATOM 1 O3' A A 319 2.433 49.134 130.330 1.00 22.38 O
ATOM 2 P C A 320 3.294 47.895 129.794 1.00 13.06 P
ATOM 3 OP1 C A 320 4.559 47.860 130.598 1.00 13.06 O
ATOM 4 OP2 C A 320 3.396 48.044 128.308 1.00 13.06 O
ATOM 5 O5' C A 320 2.357 46.639 130.155 1.00 13.06 O
ATOM 6 C5' C A 320 2.427 46.046 131.440 1.00 13.06 C
ATOM 7 C4' C A 320 1.413 44.943 131.624 1.00 13.06 C
ATOM 8 O4' C A 320 0.130 45.336 131.103 1.00 13.06 O
ATOM 9 C3' C A 320 1.683 43.648 130.907 1.00 13.06 C
ATOM 10 O3' C A 320 2.709 42.896 131.513 1.00 13.06 O
ATOM 11 C2' C A 320 0.313 42.978 130.937 1.00 13.06 C
ATOM 12 O2' C A 320 0.057 42.398 132.195 1.00 13.06 O
ATOM 13 C1' C A 320 -0.609 44.178 130.778 1.00 13.06 C
ATOM 14 N1 C A 320 -1.116 44.317 129.421 1.00 13.05 N
ATOM 15 C2 C A 320 -2.301 43.643 129.107 1.00 13.05 C
ATOM 16 O2 C A 320 -2.829 42.931 129.963 1.00 13.05 O
ATOM 17 N3 C A 320 -2.824 43.758 127.885 1.00 13.05 N
ATOM 18 C4 C A 320 -2.177 44.546 127.042 1.00 13.05 C
ATOM 19 N4 C A 320 -2.703 44.659 125.838 1.00 13.05 N
ATOM 20 C5 C A 320 -0.980 45.262 127.332 1.00 13.05 C
ATOM 21 C6 C A 320 -0.469 45.130 128.546 1.00 13.05 C
ATOM 22 P U A 321 3.939 42.373 130.627 1.00 6.66 P
ATOM 23 OP1 U A 321 5.013 41.993 131.584 1.00 6.66 O
ATOM 24 OP2 U A 321 4.234 43.420 129.602 1.00 6.66 O
ATOM 25 O5' U A 321 3.318 41.069 129.936 1.00 6.66 O
TER
ATOM 1 O3' C B 326 -5.392 48.947 123.004 1.00 20.16 O
ATOM 2 P A B 327 -6.972 48.984 122.656 1.00 11.14 P
ATOM 3 OP1 A B 327 -7.292 50.380 122.222 1.00 11.14 O
ATOM 4 OP2 A B 327 -7.692 48.399 123.826 1.00 11.14 O
ATOM 5 O5' A B 327 -7.097 47.998 121.413 1.00 11.14 O
ATOM 6 C5' A B 327 -6.155 46.957 121.236 1.00 11.14 C
ATOM 7 C4' A B 327 -6.802 45.621 120.986 1.00 11.14 C
ATOM 8 O4' A B 327 -6.052 44.617 121.689 1.00 11.14 O
ATOM 9 C3' A B 327 -8.266 45.461 121.421 1.00 11.14 C
ATOM 10 O3' A B 327 -8.989 44.775 120.402 1.00 11.14 O
ATOM 11 C2' A B 327 -8.196 44.568 122.650 1.00 11.14 C
ATOM 12 O2' A B 327 -9.314 43.711 122.791 1.00 11.14 O
ATOM 13 C1' A B 327 -6.926 43.770 122.391 1.00 11.14 C
ATOM 14 N9 A B 327 -6.228 43.335 123.583 1.00 11.11 N
ATOM 15 C8 A B 327 -5.197 44.006 124.147 1.00 11.11 C
ATOM 16 N7 A B 327 -4.712 43.390 125.187 1.00 11.11 N
ATOM 17 C5 A B 327 -5.441 42.214 125.279 1.00 11.11 C
ATOM 18 C6 A B 327 -5.369 41.126 126.180 1.00 11.11 C
ATOM 19 N6 A B 327 -4.504 41.022 127.208 1.00 11.11 N
ATOM 20 N1 A B 327 -6.260 40.143 125.970 1.00 11.11 N
ATOM 21 C2 A B 327 -7.119 40.255 124.945 1.00 11.11 C
ATOM 22 N3 A B 327 -7.273 41.208 124.032 1.00 11.11 N
ATOM 23 C4 A B 327 -6.385 42.170 124.266 1.00 11.11 C
ATOM 24 P C B 328 -10.225 45.491 119.669 1.00 22.73 P
ATOM 25 OP1 C B 328 -9.756 45.949 118.338 1.00 22.73 O
ATOM 26 OP2 C B 328 -10.768 46.486 120.614 1.00 22.73 O
ATOM 27 O5' C B 328 -11.243 44.312 119.494 1.00 22.73 O
TER
ATOM 2 P C A 320 3.294 47.895 129.794 1.00 13.06 P
ATOM 3 OP1 C A 320 4.559 47.860 130.598 1.00 13.06 O
ATOM 4 OP2 C A 320 3.396 48.044 128.308 1.00 13.06 O
ATOM 5 O5' C A 320 2.357 46.639 130.155 1.00 13.06 O
ATOM 6 C5' C A 320 2.427 46.046 131.440 1.00 13.06 C
ATOM 7 C4' C A 320 1.413 44.943 131.624 1.00 13.06 C
ATOM 8 O4' C A 320 0.130 45.336 131.103 1.00 13.06 O
ATOM 9 C3' C A 320 1.683 43.648 130.907 1.00 13.06 C
ATOM 10 O3' C A 320 2.709 42.896 131.513 1.00 13.06 O
ATOM 11 C2' C A 320 0.313 42.978 130.937 1.00 13.06 C
ATOM 12 O2' C A 320 0.057 42.398 132.195 1.00 13.06 O
ATOM 13 C1' C A 320 -0.609 44.178 130.778 1.00 13.06 C
ATOM 14 N1 C A 320 -1.116 44.317 129.421 1.00 13.05 N
ATOM 15 C2 C A 320 -2.301 43.643 129.107 1.00 13.05 C
ATOM 16 O2 C A 320 -2.829 42.931 129.963 1.00 13.05 O
ATOM 17 N3 C A 320 -2.824 43.758 127.885 1.00 13.05 N
ATOM 18 C4 C A 320 -2.177 44.546 127.042 1.00 13.05 C
ATOM 19 N4 C A 320 -2.703 44.659 125.838 1.00 13.05 N
ATOM 20 C5 C A 320 -0.980 45.262 127.332 1.00 13.05 C
ATOM 21 C6 C A 320 -0.469 45.130 128.546 1.00 13.05 C
ATOM 22 P U A 321 3.939 42.373 130.627 1.00 6.66 P
ATOM 23 OP1 U A 321 5.013 41.993 131.584 1.00 6.66 O
ATOM 24 OP2 U A 321 4.234 43.420 129.602 1.00 6.66 O
ATOM 25 O5' U A 321 3.318 41.069 129.936 1.00 6.66 O
TER
ATOM 1 O3' C B 326 -5.392 48.947 123.004 1.00 20.16 O
ATOM 2 P A B 327 -6.972 48.984 122.656 1.00 11.14 P
ATOM 3 OP1 A B 327 -7.292 50.380 122.222 1.00 11.14 O
ATOM 4 OP2 A B 327 -7.692 48.399 123.826 1.00 11.14 O
ATOM 5 O5' A B 327 -7.097 47.998 121.413 1.00 11.14 O
ATOM 6 C5' A B 327 -6.155 46.957 121.236 1.00 11.14 C
ATOM 7 C4' A B 327 -6.802 45.621 120.986 1.00 11.14 C
ATOM 8 O4' A B 327 -6.052 44.617 121.689 1.00 11.14 O
ATOM 9 C3' A B 327 -8.266 45.461 121.421 1.00 11.14 C
ATOM 10 O3' A B 327 -8.989 44.775 120.402 1.00 11.14 O
ATOM 11 C2' A B 327 -8.196 44.568 122.650 1.00 11.14 C
ATOM 12 O2' A B 327 -9.314 43.711 122.791 1.00 11.14 O
ATOM 13 C1' A B 327 -6.926 43.770 122.391 1.00 11.14 C
ATOM 14 N9 A B 327 -6.228 43.335 123.583 1.00 11.11 N
ATOM 15 C8 A B 327 -5.197 44.006 124.147 1.00 11.11 C
ATOM 16 N7 A B 327 -4.712 43.390 125.187 1.00 11.11 N
ATOM 17 C5 A B 327 -5.441 42.214 125.279 1.00 11.11 C
ATOM 18 C6 A B 327 -5.369 41.126 126.180 1.00 11.11 C
ATOM 19 N6 A B 327 -4.504 41.022 127.208 1.00 11.11 N
ATOM 20 N1 A B 327 -6.260 40.143 125.970 1.00 11.11 N
ATOM 21 C2 A B 327 -7.119 40.255 124.945 1.00 11.11 C
ATOM 22 N3 A B 327 -7.273 41.208 124.032 1.00 11.11 N
ATOM 23 C4 A B 327 -6.385 42.170 124.266 1.00 11.11 C
ATOM 24 P C B 328 -10.225 45.491 119.669 1.00 22.73 P
ATOM 25 OP1 C B 328 -9.756 45.949 118.338 1.00 22.73 O
ATOM 26 OP2 C B 328 -10.768 46.486 120.614 1.00 22.73 O
ATOM 27 O5' C B 328 -11.243 44.312 119.494 1.00 22.73 O
TER
Atoms:
C2: (-2.301,43.643,129.107)
OP1: (4.559,47.860,130.598)
OP2: (3.396,48.044,128.308)
C4: (-2.177,44.546,127.042)
O5': (2.357,46.639,130.155)
C3': (1.683,43.648,130.907)
C1': (-0.609,44.178,130.778)
O4': (0.130,45.336,131.103)
C5': (2.427,46.046,131.440)
P: (3.294,47.895,129.794)
O2: (-2.829,42.931,129.963)
C4': (1.413,44.943,131.624)
C2': (0.313,42.978,130.937)
O2': (0.057,42.398,132.195)
N1: (-1.116,44.317,129.421)
N3: (-2.824,43.758,127.885)
N4: (-2.703,44.659,125.838)
C6: (-0.469,45.130,128.546)
C5: (-0.980,45.262,127.332)
O3': (2.709,42.896,131.513)
OP1: (4.559,47.860,130.598)
OP2: (3.396,48.044,128.308)
C4: (-2.177,44.546,127.042)
O5': (2.357,46.639,130.155)
C3': (1.683,43.648,130.907)
C1': (-0.609,44.178,130.778)
O4': (0.130,45.336,131.103)
C5': (2.427,46.046,131.440)
P: (3.294,47.895,129.794)
O2: (-2.829,42.931,129.963)
C4': (1.413,44.943,131.624)
C2': (0.313,42.978,130.937)
O2': (0.057,42.398,132.195)
N1: (-1.116,44.317,129.421)
N3: (-2.824,43.758,127.885)
N4: (-2.703,44.659,125.838)
C6: (-0.469,45.130,128.546)
C5: (-0.980,45.262,127.332)
O3': (2.709,42.896,131.513)
OP1: (-7.292,50.380,122.222)
OP2: (-7.692,48.399,123.826)
C3': (-8.266,45.461,121.421)
C1': (-6.926,43.770,122.391)
C5': (-6.155,46.957,121.236)
O4': (-6.052,44.617,121.689)
C8: (-5.197,44.006,124.147)
O2': (-9.314,43.711,122.791)
C6: (-5.369,41.126,126.180)
C5: (-5.441,42.214,125.279)
C4: (-6.385,42.170,124.266)
P: (-6.972,48.984,122.656)
C4': (-6.802,45.621,120.986)
C2': (-8.196,44.568,122.650)
C2: (-7.119,40.255,124.945)
N1: (-6.260,40.143,125.970)
N3: (-7.273,41.208,124.032)
N6: (-4.504,41.022,127.208)
N7: (-4.712,43.390,125.187)
N9: (-6.228,43.335,123.583)
O5': (-7.097,47.998,121.413)
O3': (-8.989,44.775,120.402)
OP2: (-7.692,48.399,123.826)
C3': (-8.266,45.461,121.421)
C1': (-6.926,43.770,122.391)
C5': (-6.155,46.957,121.236)
O4': (-6.052,44.617,121.689)
C8: (-5.197,44.006,124.147)
O2': (-9.314,43.711,122.791)
C6: (-5.369,41.126,126.180)
C5: (-5.441,42.214,125.279)
C4: (-6.385,42.170,124.266)
P: (-6.972,48.984,122.656)
C4': (-6.802,45.621,120.986)
C2': (-8.196,44.568,122.650)
C2: (-7.119,40.255,124.945)
N1: (-6.260,40.143,125.970)
N3: (-7.273,41.208,124.032)
N6: (-4.504,41.022,127.208)
N7: (-4.712,43.390,125.187)
N9: (-6.228,43.335,123.583)
O5': (-7.097,47.998,121.413)
O3': (-8.989,44.775,120.402)
Image (generated by PyMOL):