Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1278:A1123
Extra
PDB:
ATOM 1 O3' G A1277 -164.063 55.780 -4.432 1.00 52.20 O
ATOM 2 P A A1278 -163.411 57.123 -5.045 1.00 46.31 P
ATOM 3 OP1 A A1278 -164.520 58.078 -5.295 1.00 46.31 O
ATOM 4 OP2 A A1278 -162.565 56.705 -6.190 1.00 46.31 O
ATOM 5 O5' A A1278 -162.491 57.652 -3.847 1.00 46.31 O
ATOM 6 C5' A A1278 -163.059 58.275 -2.693 1.00 46.31 C
ATOM 7 C4' A A1278 -162.471 57.736 -1.404 1.00 46.31 C
ATOM 8 O4' A A1278 -161.427 58.642 -0.935 1.00 46.31 O
ATOM 9 C3' A A1278 -163.462 57.596 -0.245 1.00 46.31 C
ATOM 10 O3' A A1278 -163.202 56.393 0.483 1.00 46.31 O
ATOM 11 C2' A A1278 -163.160 58.821 0.624 1.00 46.31 C
ATOM 12 O2' A A1278 -163.484 58.682 1.991 1.00 46.31 O
ATOM 13 C1' A A1278 -161.665 58.992 0.415 1.00 46.31 C
ATOM 14 N9 A A1278 -161.198 60.363 0.634 1.00 46.76 N
ATOM 15 C8 A A1278 -161.682 61.490 0.026 1.00 46.76 C
ATOM 16 N7 A A1278 -161.104 62.594 0.425 1.00 46.76 N
ATOM 17 C5 A A1278 -160.177 62.179 1.368 1.00 46.76 C
ATOM 18 C6 A A1278 -159.242 62.880 2.166 1.00 46.76 C
ATOM 19 N6 A A1278 -159.083 64.211 2.132 1.00 46.76 N
ATOM 20 N1 A A1278 -158.457 62.166 3.016 1.00 46.76 N
ATOM 21 C2 A A1278 -158.617 60.839 3.055 1.00 46.76 C
ATOM 22 N3 A A1278 -159.468 60.080 2.352 1.00 46.76 N
ATOM 23 C4 A A1278 -160.232 60.807 1.513 1.00 46.76 C
ATOM 24 P C A1279 -164.147 55.104 0.277 1.00 55.73 P
ATOM 25 OP1 C A1279 -163.882 54.186 1.400 1.00 55.73 O
ATOM 26 OP2 C A1279 -163.927 54.623 -1.104 1.00 55.73 O
ATOM 27 O5' C A1279 -165.624 55.704 0.404 1.00 55.73 O
TER
ATOM 1 O3' G B1122 -165.362 70.810 -0.645 1.00 89.04 O
ATOM 2 P U B1123 -166.924 70.572 -0.345 1.00 74.84 P
ATOM 3 OP1 U B1123 -167.687 71.551 -1.162 1.00 74.84 O
ATOM 4 OP2 U B1123 -167.088 70.591 1.129 1.00 74.84 O
ATOM 5 O5' U B1123 -167.174 69.111 -0.889 1.00 74.84 O
ATOM 6 C5' U B1123 -167.737 68.894 -2.170 1.00 74.84 C
ATOM 7 C4' U B1123 -167.841 67.429 -2.443 1.00 74.84 C
ATOM 8 O4' U B1123 -166.507 66.853 -2.352 1.00 74.84 O
ATOM 9 C3' U B1123 -168.681 66.658 -1.433 1.00 74.84 C
ATOM 10 O3' U B1123 -169.171 65.466 -2.051 1.00 74.84 O
ATOM 11 C2' U B1123 -167.642 66.303 -0.382 1.00 74.84 C
ATOM 12 O2' U B1123 -168.002 65.243 0.469 1.00 74.84 O
ATOM 13 C1' U B1123 -166.460 65.940 -1.271 1.00 74.84 C
ATOM 14 N1 U B1123 -165.136 66.053 -0.622 1.00 74.61 N
ATOM 15 C2 U B1123 -164.278 64.997 -0.854 1.00 74.61 C
ATOM 16 O2 U B1123 -164.603 64.042 -1.530 1.00 74.61 O
ATOM 17 N3 U B1123 -163.039 65.092 -0.276 1.00 74.61 N
ATOM 18 C4 U B1123 -162.574 66.129 0.499 1.00 74.61 C
ATOM 19 O4 U B1123 -161.431 66.068 0.944 1.00 74.61 O
ATOM 20 C5 U B1123 -163.516 67.195 0.701 1.00 74.61 C
ATOM 21 C6 U B1123 -164.738 67.123 0.145 1.00 74.61 C
ATOM 22 P U B1124 -170.137 64.459 -1.251 1.00 64.62 P
ATOM 23 OP1 U B1124 -171.156 63.974 -2.224 1.00 64.62 O
ATOM 24 OP2 U B1124 -170.593 65.172 -0.031 1.00 64.62 O
ATOM 25 O5' U B1124 -169.159 63.260 -0.848 1.00 64.62 O
TER
ATOM 2 P A A1278 -163.411 57.123 -5.045 1.00 46.31 P
ATOM 3 OP1 A A1278 -164.520 58.078 -5.295 1.00 46.31 O
ATOM 4 OP2 A A1278 -162.565 56.705 -6.190 1.00 46.31 O
ATOM 5 O5' A A1278 -162.491 57.652 -3.847 1.00 46.31 O
ATOM 6 C5' A A1278 -163.059 58.275 -2.693 1.00 46.31 C
ATOM 7 C4' A A1278 -162.471 57.736 -1.404 1.00 46.31 C
ATOM 8 O4' A A1278 -161.427 58.642 -0.935 1.00 46.31 O
ATOM 9 C3' A A1278 -163.462 57.596 -0.245 1.00 46.31 C
ATOM 10 O3' A A1278 -163.202 56.393 0.483 1.00 46.31 O
ATOM 11 C2' A A1278 -163.160 58.821 0.624 1.00 46.31 C
ATOM 12 O2' A A1278 -163.484 58.682 1.991 1.00 46.31 O
ATOM 13 C1' A A1278 -161.665 58.992 0.415 1.00 46.31 C
ATOM 14 N9 A A1278 -161.198 60.363 0.634 1.00 46.76 N
ATOM 15 C8 A A1278 -161.682 61.490 0.026 1.00 46.76 C
ATOM 16 N7 A A1278 -161.104 62.594 0.425 1.00 46.76 N
ATOM 17 C5 A A1278 -160.177 62.179 1.368 1.00 46.76 C
ATOM 18 C6 A A1278 -159.242 62.880 2.166 1.00 46.76 C
ATOM 19 N6 A A1278 -159.083 64.211 2.132 1.00 46.76 N
ATOM 20 N1 A A1278 -158.457 62.166 3.016 1.00 46.76 N
ATOM 21 C2 A A1278 -158.617 60.839 3.055 1.00 46.76 C
ATOM 22 N3 A A1278 -159.468 60.080 2.352 1.00 46.76 N
ATOM 23 C4 A A1278 -160.232 60.807 1.513 1.00 46.76 C
ATOM 24 P C A1279 -164.147 55.104 0.277 1.00 55.73 P
ATOM 25 OP1 C A1279 -163.882 54.186 1.400 1.00 55.73 O
ATOM 26 OP2 C A1279 -163.927 54.623 -1.104 1.00 55.73 O
ATOM 27 O5' C A1279 -165.624 55.704 0.404 1.00 55.73 O
TER
ATOM 1 O3' G B1122 -165.362 70.810 -0.645 1.00 89.04 O
ATOM 2 P U B1123 -166.924 70.572 -0.345 1.00 74.84 P
ATOM 3 OP1 U B1123 -167.687 71.551 -1.162 1.00 74.84 O
ATOM 4 OP2 U B1123 -167.088 70.591 1.129 1.00 74.84 O
ATOM 5 O5' U B1123 -167.174 69.111 -0.889 1.00 74.84 O
ATOM 6 C5' U B1123 -167.737 68.894 -2.170 1.00 74.84 C
ATOM 7 C4' U B1123 -167.841 67.429 -2.443 1.00 74.84 C
ATOM 8 O4' U B1123 -166.507 66.853 -2.352 1.00 74.84 O
ATOM 9 C3' U B1123 -168.681 66.658 -1.433 1.00 74.84 C
ATOM 10 O3' U B1123 -169.171 65.466 -2.051 1.00 74.84 O
ATOM 11 C2' U B1123 -167.642 66.303 -0.382 1.00 74.84 C
ATOM 12 O2' U B1123 -168.002 65.243 0.469 1.00 74.84 O
ATOM 13 C1' U B1123 -166.460 65.940 -1.271 1.00 74.84 C
ATOM 14 N1 U B1123 -165.136 66.053 -0.622 1.00 74.61 N
ATOM 15 C2 U B1123 -164.278 64.997 -0.854 1.00 74.61 C
ATOM 16 O2 U B1123 -164.603 64.042 -1.530 1.00 74.61 O
ATOM 17 N3 U B1123 -163.039 65.092 -0.276 1.00 74.61 N
ATOM 18 C4 U B1123 -162.574 66.129 0.499 1.00 74.61 C
ATOM 19 O4 U B1123 -161.431 66.068 0.944 1.00 74.61 O
ATOM 20 C5 U B1123 -163.516 67.195 0.701 1.00 74.61 C
ATOM 21 C6 U B1123 -164.738 67.123 0.145 1.00 74.61 C
ATOM 22 P U B1124 -170.137 64.459 -1.251 1.00 64.62 P
ATOM 23 OP1 U B1124 -171.156 63.974 -2.224 1.00 64.62 O
ATOM 24 OP2 U B1124 -170.593 65.172 -0.031 1.00 64.62 O
ATOM 25 O5' U B1124 -169.159 63.260 -0.848 1.00 64.62 O
TER
Atoms:
OP1: (-164.520,58.078,-5.295)
OP2: (-162.565,56.705,-6.190)
C3': (-163.462,57.596,-0.245)
C1': (-161.665,58.992,0.415)
C5': (-163.059,58.275,-2.693)
O4': (-161.427,58.642,-0.935)
C8: (-161.682,61.490,0.026)
O2': (-163.484,58.682,1.991)
C6: (-159.242,62.880,2.166)
C5: (-160.177,62.179,1.368)
C4: (-160.232,60.807,1.513)
P: (-163.411,57.123,-5.045)
C4': (-162.471,57.736,-1.404)
C2': (-163.160,58.821,0.624)
C2: (-158.617,60.839,3.055)
N1: (-158.457,62.166,3.016)
N3: (-159.468,60.080,2.352)
N6: (-159.083,64.211,2.132)
N7: (-161.104,62.594,0.425)
N9: (-161.198,60.363,0.634)
O5': (-162.491,57.652,-3.847)
O3': (-163.202,56.393,0.483)
OP2: (-162.565,56.705,-6.190)
C3': (-163.462,57.596,-0.245)
C1': (-161.665,58.992,0.415)
C5': (-163.059,58.275,-2.693)
O4': (-161.427,58.642,-0.935)
C8: (-161.682,61.490,0.026)
O2': (-163.484,58.682,1.991)
C6: (-159.242,62.880,2.166)
C5: (-160.177,62.179,1.368)
C4: (-160.232,60.807,1.513)
P: (-163.411,57.123,-5.045)
C4': (-162.471,57.736,-1.404)
C2': (-163.160,58.821,0.624)
C2: (-158.617,60.839,3.055)
N1: (-158.457,62.166,3.016)
N3: (-159.468,60.080,2.352)
N6: (-159.083,64.211,2.132)
N7: (-161.104,62.594,0.425)
N9: (-161.198,60.363,0.634)
O5': (-162.491,57.652,-3.847)
O3': (-163.202,56.393,0.483)
C4: (-162.574,66.129,0.499)
N3: (-163.039,65.092,-0.276)
OP1: (-167.687,71.551,-1.162)
OP2: (-167.088,70.591,1.129)
C2: (-164.278,64.997,-0.854)
C1': (-166.460,65.940,-1.271)
C3': (-168.681,66.658,-1.433)
O5': (-167.174,69.111,-0.889)
O4': (-166.507,66.853,-2.352)
C5': (-167.737,68.894,-2.170)
P: (-166.924,70.572,-0.345)
C4': (-167.841,67.429,-2.443)
C2': (-167.642,66.303,-0.382)
O2': (-168.002,65.243,0.469)
N1: (-165.136,66.053,-0.622)
O4: (-161.431,66.068,0.944)
O2: (-164.603,64.042,-1.530)
C6: (-164.738,67.123,0.145)
C5: (-163.516,67.195,0.701)
O3': (-169.171,65.466,-2.051)
N3: (-163.039,65.092,-0.276)
OP1: (-167.687,71.551,-1.162)
OP2: (-167.088,70.591,1.129)
C2: (-164.278,64.997,-0.854)
C1': (-166.460,65.940,-1.271)
C3': (-168.681,66.658,-1.433)
O5': (-167.174,69.111,-0.889)
O4': (-166.507,66.853,-2.352)
C5': (-167.737,68.894,-2.170)
P: (-166.924,70.572,-0.345)
C4': (-167.841,67.429,-2.443)
C2': (-167.642,66.303,-0.382)
O2': (-168.002,65.243,0.469)
N1: (-165.136,66.053,-0.622)
O4: (-161.431,66.068,0.944)
O2: (-164.603,64.042,-1.530)
C6: (-164.738,67.123,0.145)
C5: (-163.516,67.195,0.701)
O3': (-169.171,65.466,-2.051)
Image (generated by PyMOL):