Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3L3C:P39:P38
Extra
PDB:
ATOM 1 O3' U A 38 4.221 45.950 0.654 1.00 90.36 O
ATOM 2 P U A 39 4.333 44.382 0.989 1.00 90.38 P
ATOM 3 OP1 U A 39 3.605 43.646 -0.070 1.00 90.28 O
ATOM 4 OP2 U A 39 3.951 44.173 2.406 1.00 90.33 O
ATOM 5 O5' U A 39 5.903 44.089 0.839 1.00 89.74 O
ATOM 6 C5' U A 39 6.520 44.032 -0.449 1.00 89.04 C
ATOM 7 C4' U A 39 8.015 44.299 -0.383 1.00 88.44 C
ATOM 8 O4' U A 39 8.276 45.496 0.398 1.00 88.46 O
ATOM 9 C3' U A 39 8.865 43.236 0.301 1.00 88.09 C
ATOM 10 O3' U A 39 9.141 42.142 -0.566 1.00 87.68 O
ATOM 11 C2' U A 39 10.120 44.044 0.614 1.00 88.15 C
ATOM 12 O2' U A 39 10.944 44.252 -0.520 1.00 88.34 O
ATOM 13 C1' U A 39 9.510 45.363 1.088 1.00 88.09 C
ATOM 14 N1 U A 39 9.320 45.418 2.590 1.00 87.67 N
ATOM 15 C2 U A 39 10.397 45.753 3.402 1.00 87.55 C
ATOM 16 O2 U A 39 11.511 46.021 2.984 1.00 87.68 O
ATOM 17 N3 U A 39 10.129 45.767 4.751 1.00 87.28 N
ATOM 18 C4 U A 39 8.921 45.484 5.365 1.00 87.14 C
ATOM 19 O4 U A 39 8.835 45.540 6.587 1.00 87.06 O
ATOM 20 C5 U A 39 7.846 45.143 4.466 1.00 87.21 C
ATOM 21 C6 U A 39 8.083 45.123 3.146 1.00 87.45 C
ATOM 22 P U A 40 9.345 40.653 -0.001 1.00 87.16 P
ATOM 23 OP1 U A 40 9.775 39.828 -1.154 1.00 87.20 O
ATOM 24 OP2 U A 40 8.136 40.274 0.765 1.00 87.05 O
ATOM 25 O5' U A 40 10.578 40.778 1.017 1.00 86.58 O
TER
ATOM 1 O3' G B 37 1.216 48.981 5.218 1.00 90.52 O
ATOM 2 P U B 38 1.579 47.434 4.995 1.00 91.01 P
ATOM 3 OP1 U B 38 0.388 46.776 4.408 1.00 91.06 O
ATOM 4 OP2 U B 38 2.161 46.903 6.251 1.00 90.79 O
ATOM 5 O5' U B 38 2.722 47.492 3.875 1.00 90.93 O
ATOM 6 C5' U B 38 2.405 47.845 2.526 1.00 90.75 C
ATOM 7 C4' U B 38 3.662 48.088 1.710 1.00 90.55 C
ATOM 8 O4' U B 38 4.452 49.135 2.335 1.00 90.47 O
ATOM 9 C3' U B 38 4.631 46.916 1.627 1.00 90.50 C
ATOM 10 O3' U B 38 4.221 45.950 0.654 1.00 90.36 O
ATOM 11 C2' U B 38 5.935 47.632 1.272 1.00 90.40 C
ATOM 12 O2' U B 38 6.023 48.005 -0.092 1.00 90.65 O
ATOM 13 C1' U B 38 5.836 48.879 2.147 1.00 89.99 C
ATOM 14 N1 U B 38 6.550 48.772 3.479 1.00 89.33 N
ATOM 15 C2 U B 38 7.914 49.026 3.544 1.00 89.02 C
ATOM 16 O2 U B 38 8.596 49.333 2.582 1.00 89.08 O
ATOM 17 N3 U B 38 8.474 48.906 4.796 1.00 88.57 N
ATOM 18 C4 U B 38 7.824 48.567 5.971 1.00 88.49 C
ATOM 19 O4 U B 38 8.460 48.499 7.018 1.00 88.22 O
ATOM 20 C5 U B 38 6.409 48.317 5.830 1.00 88.74 C
ATOM 21 C6 U B 38 5.840 48.428 4.621 1.00 88.97 C
ATOM 22 P U B 39 4.333 44.382 0.989 1.00 90.38 P
ATOM 23 OP1 U B 39 3.605 43.646 -0.070 1.00 90.28 O
ATOM 24 OP2 U B 39 3.951 44.173 2.406 1.00 90.33 O
ATOM 25 O5' U B 39 5.903 44.089 0.839 1.00 89.74 O
TER
ATOM 2 P U A 39 4.333 44.382 0.989 1.00 90.38 P
ATOM 3 OP1 U A 39 3.605 43.646 -0.070 1.00 90.28 O
ATOM 4 OP2 U A 39 3.951 44.173 2.406 1.00 90.33 O
ATOM 5 O5' U A 39 5.903 44.089 0.839 1.00 89.74 O
ATOM 6 C5' U A 39 6.520 44.032 -0.449 1.00 89.04 C
ATOM 7 C4' U A 39 8.015 44.299 -0.383 1.00 88.44 C
ATOM 8 O4' U A 39 8.276 45.496 0.398 1.00 88.46 O
ATOM 9 C3' U A 39 8.865 43.236 0.301 1.00 88.09 C
ATOM 10 O3' U A 39 9.141 42.142 -0.566 1.00 87.68 O
ATOM 11 C2' U A 39 10.120 44.044 0.614 1.00 88.15 C
ATOM 12 O2' U A 39 10.944 44.252 -0.520 1.00 88.34 O
ATOM 13 C1' U A 39 9.510 45.363 1.088 1.00 88.09 C
ATOM 14 N1 U A 39 9.320 45.418 2.590 1.00 87.67 N
ATOM 15 C2 U A 39 10.397 45.753 3.402 1.00 87.55 C
ATOM 16 O2 U A 39 11.511 46.021 2.984 1.00 87.68 O
ATOM 17 N3 U A 39 10.129 45.767 4.751 1.00 87.28 N
ATOM 18 C4 U A 39 8.921 45.484 5.365 1.00 87.14 C
ATOM 19 O4 U A 39 8.835 45.540 6.587 1.00 87.06 O
ATOM 20 C5 U A 39 7.846 45.143 4.466 1.00 87.21 C
ATOM 21 C6 U A 39 8.083 45.123 3.146 1.00 87.45 C
ATOM 22 P U A 40 9.345 40.653 -0.001 1.00 87.16 P
ATOM 23 OP1 U A 40 9.775 39.828 -1.154 1.00 87.20 O
ATOM 24 OP2 U A 40 8.136 40.274 0.765 1.00 87.05 O
ATOM 25 O5' U A 40 10.578 40.778 1.017 1.00 86.58 O
TER
ATOM 1 O3' G B 37 1.216 48.981 5.218 1.00 90.52 O
ATOM 2 P U B 38 1.579 47.434 4.995 1.00 91.01 P
ATOM 3 OP1 U B 38 0.388 46.776 4.408 1.00 91.06 O
ATOM 4 OP2 U B 38 2.161 46.903 6.251 1.00 90.79 O
ATOM 5 O5' U B 38 2.722 47.492 3.875 1.00 90.93 O
ATOM 6 C5' U B 38 2.405 47.845 2.526 1.00 90.75 C
ATOM 7 C4' U B 38 3.662 48.088 1.710 1.00 90.55 C
ATOM 8 O4' U B 38 4.452 49.135 2.335 1.00 90.47 O
ATOM 9 C3' U B 38 4.631 46.916 1.627 1.00 90.50 C
ATOM 10 O3' U B 38 4.221 45.950 0.654 1.00 90.36 O
ATOM 11 C2' U B 38 5.935 47.632 1.272 1.00 90.40 C
ATOM 12 O2' U B 38 6.023 48.005 -0.092 1.00 90.65 O
ATOM 13 C1' U B 38 5.836 48.879 2.147 1.00 89.99 C
ATOM 14 N1 U B 38 6.550 48.772 3.479 1.00 89.33 N
ATOM 15 C2 U B 38 7.914 49.026 3.544 1.00 89.02 C
ATOM 16 O2 U B 38 8.596 49.333 2.582 1.00 89.08 O
ATOM 17 N3 U B 38 8.474 48.906 4.796 1.00 88.57 N
ATOM 18 C4 U B 38 7.824 48.567 5.971 1.00 88.49 C
ATOM 19 O4 U B 38 8.460 48.499 7.018 1.00 88.22 O
ATOM 20 C5 U B 38 6.409 48.317 5.830 1.00 88.74 C
ATOM 21 C6 U B 38 5.840 48.428 4.621 1.00 88.97 C
ATOM 22 P U B 39 4.333 44.382 0.989 1.00 90.38 P
ATOM 23 OP1 U B 39 3.605 43.646 -0.070 1.00 90.28 O
ATOM 24 OP2 U B 39 3.951 44.173 2.406 1.00 90.33 O
ATOM 25 O5' U B 39 5.903 44.089 0.839 1.00 89.74 O
TER
Atoms:
C4: (8.921,45.484,5.365)
N3: (10.129,45.767,4.751)
OP1: (3.605,43.646,-0.070)
OP2: (3.951,44.173,2.406)
C2: (10.397,45.753,3.402)
C1': (9.510,45.363,1.088)
C3': (8.865,43.236,0.301)
O5': (5.903,44.089,0.839)
O4': (8.276,45.496,0.398)
C5': (6.520,44.032,-0.449)
P: (4.333,44.382,0.989)
C4': (8.015,44.299,-0.383)
C2': (10.120,44.044,0.614)
O2': (10.944,44.252,-0.520)
N1: (9.320,45.418,2.590)
O4: (8.835,45.540,6.587)
O2: (11.511,46.021,2.984)
C6: (8.083,45.123,3.146)
C5: (7.846,45.143,4.466)
O3': (9.141,42.142,-0.566)
N3: (10.129,45.767,4.751)
OP1: (3.605,43.646,-0.070)
OP2: (3.951,44.173,2.406)
C2: (10.397,45.753,3.402)
C1': (9.510,45.363,1.088)
C3': (8.865,43.236,0.301)
O5': (5.903,44.089,0.839)
O4': (8.276,45.496,0.398)
C5': (6.520,44.032,-0.449)
P: (4.333,44.382,0.989)
C4': (8.015,44.299,-0.383)
C2': (10.120,44.044,0.614)
O2': (10.944,44.252,-0.520)
N1: (9.320,45.418,2.590)
O4: (8.835,45.540,6.587)
O2: (11.511,46.021,2.984)
C6: (8.083,45.123,3.146)
C5: (7.846,45.143,4.466)
O3': (9.141,42.142,-0.566)
C4: (7.824,48.567,5.971)
N3: (8.474,48.906,4.796)
OP1: (0.388,46.776,4.408)
OP2: (2.161,46.903,6.251)
C2: (7.914,49.026,3.544)
C1': (5.836,48.879,2.147)
C3': (4.631,46.916,1.627)
O5': (2.722,47.492,3.875)
O4': (4.452,49.135,2.335)
C5': (2.405,47.845,2.526)
P: (1.579,47.434,4.995)
C4': (3.662,48.088,1.710)
C2': (5.935,47.632,1.272)
O2': (6.023,48.005,-0.092)
N1: (6.550,48.772,3.479)
O4: (8.460,48.499,7.018)
O2: (8.596,49.333,2.582)
C6: (5.840,48.428,4.621)
C5: (6.409,48.317,5.830)
O3': (4.221,45.950,0.654)
N3: (8.474,48.906,4.796)
OP1: (0.388,46.776,4.408)
OP2: (2.161,46.903,6.251)
C2: (7.914,49.026,3.544)
C1': (5.836,48.879,2.147)
C3': (4.631,46.916,1.627)
O5': (2.722,47.492,3.875)
O4': (4.452,49.135,2.335)
C5': (2.405,47.845,2.526)
P: (1.579,47.434,4.995)
C4': (3.662,48.088,1.710)
C2': (5.935,47.632,1.272)
O2': (6.023,48.005,-0.092)
N1: (6.550,48.772,3.479)
O4: (8.460,48.499,7.018)
O2: (8.596,49.333,2.582)
C6: (5.840,48.428,4.621)
C5: (6.409,48.317,5.830)
O3': (4.221,45.950,0.654)
Image (generated by PyMOL):