Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0548:0547
Extra
PDB:
ATOM 1 O3' U A 547 -13.404 114.130 105.095 1.00 71.49 O
ATOM 2 P U A 548 -13.127 112.543 105.177 1.00 70.85 P
ATOM 3 OP1 U A 548 -13.319 112.151 106.594 1.00 68.92 O
ATOM 4 OP2 U A 548 -11.835 112.252 104.509 1.00 71.50 O
ATOM 5 O5' U A 548 -14.288 111.879 104.306 1.00 69.61 O
ATOM 6 C5' U A 548 -15.656 111.894 104.756 1.00 68.69 C
ATOM 7 C4' U A 548 -16.587 111.456 103.648 1.00 67.59 C
ATOM 8 O4' U A 548 -16.483 112.376 102.525 1.00 68.07 O
ATOM 9 C3' U A 548 -16.296 110.105 103.023 1.00 67.02 C
ATOM 10 O3' U A 548 -16.764 109.009 103.789 1.00 65.14 O
ATOM 11 C2' U A 548 -16.998 110.216 101.679 1.00 67.95 C
ATOM 12 O2' U A 548 -18.398 110.014 101.746 1.00 67.08 O
ATOM 13 C1' U A 548 -16.679 111.667 101.306 1.00 68.93 C
ATOM 14 N1 U A 548 -15.446 111.746 100.503 1.00 70.31 N
ATOM 15 C2 U A 548 -15.537 111.468 99.147 1.00 71.43 C
ATOM 16 O2 U A 548 -16.590 111.200 98.588 1.00 72.14 O
ATOM 17 N3 U A 548 -14.344 111.508 98.466 1.00 72.67 N
ATOM 18 C4 U A 548 -13.098 111.795 98.983 1.00 71.96 C
ATOM 19 O4 U A 548 -12.115 111.779 98.241 1.00 71.56 O
ATOM 20 C5 U A 548 -13.089 112.089 100.381 1.00 72.01 C
ATOM 21 C6 U A 548 -14.232 112.061 101.075 1.00 71.47 C
ATOM 22 P G A 549 -16.113 107.558 103.561 1.00 64.73 P
ATOM 23 OP1 G A 549 -16.761 106.614 104.505 1.00 66.03 O
ATOM 24 OP2 G A 549 -14.635 107.702 103.570 1.00 64.51 O
ATOM 25 O5' G A 549 -16.552 107.163 102.081 1.00 60.99 O
TER
ATOM 1 O3' C B 546 -8.946 117.442 103.355 1.00 72.45 O
ATOM 2 P U B 547 -9.213 115.877 103.638 1.00 74.62 P
ATOM 3 OP1 U B 547 -8.383 115.509 104.813 1.00 73.68 O
ATOM 4 OP2 U B 547 -9.073 115.107 102.372 1.00 72.07 O
ATOM 5 O5' U B 547 -10.745 115.822 104.080 1.00 73.99 O
ATOM 6 C5' U B 547 -11.748 116.435 103.266 1.00 73.44 C
ATOM 7 C4' U B 547 -13.129 116.207 103.825 1.00 73.67 C
ATOM 8 O4' U B 547 -14.055 116.934 102.972 1.00 74.80 O
ATOM 9 C3' U B 547 -13.609 114.758 103.828 1.00 73.58 C
ATOM 10 O3' U B 547 -13.404 114.130 105.095 1.00 71.49 O
ATOM 11 C2' U B 547 -15.084 114.885 103.472 1.00 74.53 C
ATOM 12 O2' U B 547 -15.876 115.238 104.586 1.00 75.61 O
ATOM 13 C1' U B 547 -15.050 116.056 102.488 1.00 76.10 C
ATOM 14 N1 U B 547 -14.711 115.686 101.102 1.00 77.59 N
ATOM 15 C2 U B 547 -15.751 115.539 100.196 1.00 79.05 C
ATOM 16 O2 U B 547 -16.919 115.738 100.484 1.00 81.27 O
ATOM 17 N3 U B 547 -15.370 115.159 98.932 1.00 79.03 N
ATOM 18 C4 U B 547 -14.086 114.932 98.485 1.00 79.13 C
ATOM 19 O4 U B 547 -13.905 114.559 97.326 1.00 79.30 O
ATOM 20 C5 U B 547 -13.068 115.128 99.467 1.00 78.74 C
ATOM 21 C6 U B 547 -13.405 115.484 100.709 1.00 77.99 C
ATOM 22 P U B 548 -13.127 112.543 105.177 1.00 70.85 P
ATOM 23 OP1 U B 548 -13.319 112.151 106.594 1.00 68.92 O
ATOM 24 OP2 U B 548 -11.835 112.252 104.509 1.00 71.50 O
ATOM 25 O5' U B 548 -14.288 111.879 104.306 1.00 69.61 O
TER
ATOM 2 P U A 548 -13.127 112.543 105.177 1.00 70.85 P
ATOM 3 OP1 U A 548 -13.319 112.151 106.594 1.00 68.92 O
ATOM 4 OP2 U A 548 -11.835 112.252 104.509 1.00 71.50 O
ATOM 5 O5' U A 548 -14.288 111.879 104.306 1.00 69.61 O
ATOM 6 C5' U A 548 -15.656 111.894 104.756 1.00 68.69 C
ATOM 7 C4' U A 548 -16.587 111.456 103.648 1.00 67.59 C
ATOM 8 O4' U A 548 -16.483 112.376 102.525 1.00 68.07 O
ATOM 9 C3' U A 548 -16.296 110.105 103.023 1.00 67.02 C
ATOM 10 O3' U A 548 -16.764 109.009 103.789 1.00 65.14 O
ATOM 11 C2' U A 548 -16.998 110.216 101.679 1.00 67.95 C
ATOM 12 O2' U A 548 -18.398 110.014 101.746 1.00 67.08 O
ATOM 13 C1' U A 548 -16.679 111.667 101.306 1.00 68.93 C
ATOM 14 N1 U A 548 -15.446 111.746 100.503 1.00 70.31 N
ATOM 15 C2 U A 548 -15.537 111.468 99.147 1.00 71.43 C
ATOM 16 O2 U A 548 -16.590 111.200 98.588 1.00 72.14 O
ATOM 17 N3 U A 548 -14.344 111.508 98.466 1.00 72.67 N
ATOM 18 C4 U A 548 -13.098 111.795 98.983 1.00 71.96 C
ATOM 19 O4 U A 548 -12.115 111.779 98.241 1.00 71.56 O
ATOM 20 C5 U A 548 -13.089 112.089 100.381 1.00 72.01 C
ATOM 21 C6 U A 548 -14.232 112.061 101.075 1.00 71.47 C
ATOM 22 P G A 549 -16.113 107.558 103.561 1.00 64.73 P
ATOM 23 OP1 G A 549 -16.761 106.614 104.505 1.00 66.03 O
ATOM 24 OP2 G A 549 -14.635 107.702 103.570 1.00 64.51 O
ATOM 25 O5' G A 549 -16.552 107.163 102.081 1.00 60.99 O
TER
ATOM 1 O3' C B 546 -8.946 117.442 103.355 1.00 72.45 O
ATOM 2 P U B 547 -9.213 115.877 103.638 1.00 74.62 P
ATOM 3 OP1 U B 547 -8.383 115.509 104.813 1.00 73.68 O
ATOM 4 OP2 U B 547 -9.073 115.107 102.372 1.00 72.07 O
ATOM 5 O5' U B 547 -10.745 115.822 104.080 1.00 73.99 O
ATOM 6 C5' U B 547 -11.748 116.435 103.266 1.00 73.44 C
ATOM 7 C4' U B 547 -13.129 116.207 103.825 1.00 73.67 C
ATOM 8 O4' U B 547 -14.055 116.934 102.972 1.00 74.80 O
ATOM 9 C3' U B 547 -13.609 114.758 103.828 1.00 73.58 C
ATOM 10 O3' U B 547 -13.404 114.130 105.095 1.00 71.49 O
ATOM 11 C2' U B 547 -15.084 114.885 103.472 1.00 74.53 C
ATOM 12 O2' U B 547 -15.876 115.238 104.586 1.00 75.61 O
ATOM 13 C1' U B 547 -15.050 116.056 102.488 1.00 76.10 C
ATOM 14 N1 U B 547 -14.711 115.686 101.102 1.00 77.59 N
ATOM 15 C2 U B 547 -15.751 115.539 100.196 1.00 79.05 C
ATOM 16 O2 U B 547 -16.919 115.738 100.484 1.00 81.27 O
ATOM 17 N3 U B 547 -15.370 115.159 98.932 1.00 79.03 N
ATOM 18 C4 U B 547 -14.086 114.932 98.485 1.00 79.13 C
ATOM 19 O4 U B 547 -13.905 114.559 97.326 1.00 79.30 O
ATOM 20 C5 U B 547 -13.068 115.128 99.467 1.00 78.74 C
ATOM 21 C6 U B 547 -13.405 115.484 100.709 1.00 77.99 C
ATOM 22 P U B 548 -13.127 112.543 105.177 1.00 70.85 P
ATOM 23 OP1 U B 548 -13.319 112.151 106.594 1.00 68.92 O
ATOM 24 OP2 U B 548 -11.835 112.252 104.509 1.00 71.50 O
ATOM 25 O5' U B 548 -14.288 111.879 104.306 1.00 69.61 O
TER
Atoms:
C4: (-13.098,111.795,98.983)
N3: (-14.344,111.508,98.466)
OP1: (-13.319,112.151,106.594)
OP2: (-11.835,112.252,104.509)
C2: (-15.537,111.468,99.147)
C1': (-16.679,111.667,101.306)
C3': (-16.296,110.105,103.023)
O5': (-14.288,111.879,104.306)
O4': (-16.483,112.376,102.525)
C5': (-15.656,111.894,104.756)
P: (-13.127,112.543,105.177)
C4': (-16.587,111.456,103.648)
C2': (-16.998,110.216,101.679)
O2': (-18.398,110.014,101.746)
N1: (-15.446,111.746,100.503)
O4: (-12.115,111.779,98.241)
O2: (-16.590,111.200,98.588)
C6: (-14.232,112.061,101.075)
C5: (-13.089,112.089,100.381)
O3': (-16.764,109.009,103.789)
N3: (-14.344,111.508,98.466)
OP1: (-13.319,112.151,106.594)
OP2: (-11.835,112.252,104.509)
C2: (-15.537,111.468,99.147)
C1': (-16.679,111.667,101.306)
C3': (-16.296,110.105,103.023)
O5': (-14.288,111.879,104.306)
O4': (-16.483,112.376,102.525)
C5': (-15.656,111.894,104.756)
P: (-13.127,112.543,105.177)
C4': (-16.587,111.456,103.648)
C2': (-16.998,110.216,101.679)
O2': (-18.398,110.014,101.746)
N1: (-15.446,111.746,100.503)
O4: (-12.115,111.779,98.241)
O2: (-16.590,111.200,98.588)
C6: (-14.232,112.061,101.075)
C5: (-13.089,112.089,100.381)
O3': (-16.764,109.009,103.789)
C4: (-14.086,114.932,98.485)
N3: (-15.370,115.159,98.932)
OP1: (-8.383,115.509,104.813)
OP2: (-9.073,115.107,102.372)
C2: (-15.751,115.539,100.196)
C1': (-15.050,116.056,102.488)
C3': (-13.609,114.758,103.828)
O5': (-10.745,115.822,104.080)
O4': (-14.055,116.934,102.972)
C5': (-11.748,116.435,103.266)
P: (-9.213,115.877,103.638)
C4': (-13.129,116.207,103.825)
C2': (-15.084,114.885,103.472)
O2': (-15.876,115.238,104.586)
N1: (-14.711,115.686,101.102)
O4: (-13.905,114.559,97.326)
O2: (-16.919,115.738,100.484)
C6: (-13.405,115.484,100.709)
C5: (-13.068,115.128,99.467)
O3': (-13.404,114.130,105.095)
N3: (-15.370,115.159,98.932)
OP1: (-8.383,115.509,104.813)
OP2: (-9.073,115.107,102.372)
C2: (-15.751,115.539,100.196)
C1': (-15.050,116.056,102.488)
C3': (-13.609,114.758,103.828)
O5': (-10.745,115.822,104.080)
O4': (-14.055,116.934,102.972)
C5': (-11.748,116.435,103.266)
P: (-9.213,115.877,103.638)
C4': (-13.129,116.207,103.825)
C2': (-15.084,114.885,103.472)
O2': (-15.876,115.238,104.586)
N1: (-14.711,115.686,101.102)
O4: (-13.905,114.559,97.326)
O2: (-16.919,115.738,100.484)
C6: (-13.405,115.484,100.709)
C5: (-13.068,115.128,99.467)
O3': (-13.404,114.130,105.095)
Image (generated by PyMOL):