Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A139:A160
Extra
PDB:
ATOM 1 O3' A A 138 107.116 28.327 -6.060 1.00 79.31 O
ATOM 2 P C A 139 107.990 27.461 -5.034 1.00 59.75 P
ATOM 3 OP1 C A 139 108.830 26.526 -5.853 1.00 60.95 O
ATOM 4 OP2 C A 139 107.099 26.912 -3.963 1.00 60.95 O
ATOM 5 O5' C A 139 108.943 28.537 -4.350 1.00 59.75 O
ATOM 6 C5' C A 139 109.812 29.364 -5.137 1.00 59.75 C
ATOM 7 C4' C A 139 110.402 30.439 -4.272 1.00 59.75 C
ATOM 8 O4' C A 139 109.345 31.313 -3.812 1.00 59.75 O
ATOM 9 C3' C A 139 111.067 29.931 -3.009 1.00 59.75 C
ATOM 10 O3' C A 139 112.416 29.600 -3.298 1.00 59.75 O
ATOM 11 C2' C A 139 110.942 31.112 -2.055 1.00 59.75 C
ATOM 12 O2' C A 139 111.970 32.057 -2.237 1.00 59.75 O
ATOM 13 C1' C A 139 109.622 31.742 -2.497 1.00 59.75 C
ATOM 14 N1 C A 139 108.461 31.442 -1.643 1.00 60.95 N
ATOM 15 C2 C A 139 108.300 32.165 -0.456 1.00 60.95 C
ATOM 16 O2 C A 139 109.155 33.012 -0.150 1.00 60.95 O
ATOM 17 N3 C A 139 107.223 31.925 0.327 1.00 60.95 N
ATOM 18 C4 C A 139 106.329 31.008 -0.037 1.00 60.95 C
ATOM 19 N4 C A 139 105.280 30.820 0.753 1.00 60.95 N
ATOM 20 C5 C A 139 106.472 30.246 -1.233 1.00 60.95 C
ATOM 21 C6 C A 139 107.544 30.491 -1.998 1.00 60.95 C
ATOM 22 P A A 140 113.331 28.907 -2.174 1.00 52.34 P
ATOM 23 OP1 A A 140 114.677 28.662 -2.794 1.00 52.63 O
ATOM 24 OP2 A A 140 112.569 27.767 -1.563 1.00 52.63 O
ATOM 25 O5' A A 140 113.472 30.032 -1.051 1.00 52.34 O
TER
ATOM 1 O3' U B 159 100.576 27.971 3.528 1.00 58.22 O
ATOM 2 P A B 160 100.020 29.184 2.645 1.00 57.88 P
ATOM 3 OP1 A B 160 98.538 29.079 2.563 1.00 59.01 O
ATOM 4 OP2 A B 160 100.830 29.198 1.386 1.00 59.01 O
ATOM 5 O5' A B 160 100.396 30.459 3.524 1.00 57.88 O
ATOM 6 C5' A B 160 99.966 30.555 4.897 1.00 57.88 C
ATOM 7 C4' A B 160 100.291 31.916 5.466 1.00 57.88 C
ATOM 8 O4' A B 160 101.699 32.018 5.786 1.00 57.88 O
ATOM 9 C3' A B 160 100.021 33.096 4.556 1.00 57.88 C
ATOM 10 O3' A B 160 98.660 33.465 4.586 1.00 57.88 O
ATOM 11 C2' A B 160 100.931 34.169 5.133 1.00 57.88 C
ATOM 12 O2' A B 160 100.376 34.762 6.292 1.00 57.88 O
ATOM 13 C1' A B 160 102.141 33.344 5.561 1.00 57.88 C
ATOM 14 N9 A B 160 103.221 33.308 4.573 1.00 59.01 N
ATOM 15 C8 A B 160 103.322 32.523 3.451 1.00 59.01 C
ATOM 16 N7 A B 160 104.453 32.669 2.806 1.00 59.01 N
ATOM 17 C5 A B 160 105.137 33.624 3.542 1.00 59.01 C
ATOM 18 C6 A B 160 106.410 34.197 3.395 1.00 59.01 C
ATOM 19 N6 A B 160 107.262 33.871 2.425 1.00 59.01 N
ATOM 20 N1 A B 160 106.788 35.124 4.297 1.00 59.01 N
ATOM 21 C2 A B 160 105.939 35.444 5.280 1.00 59.01 C
ATOM 22 N3 A B 160 104.725 34.970 5.529 1.00 59.01 N
ATOM 23 C4 A B 160 104.380 34.048 4.616 1.00 59.01 C
ATOM 24 P A B 161 97.980 34.055 3.261 1.00 56.55 P
ATOM 25 OP1 A B 161 96.510 33.971 3.429 1.00 45.38 O
ATOM 26 OP2 A B 161 98.626 33.400 2.081 1.00 45.38 O
ATOM 27 O5' A B 161 98.384 35.594 3.298 1.00 56.55 O
TER
ATOM 2 P C A 139 107.990 27.461 -5.034 1.00 59.75 P
ATOM 3 OP1 C A 139 108.830 26.526 -5.853 1.00 60.95 O
ATOM 4 OP2 C A 139 107.099 26.912 -3.963 1.00 60.95 O
ATOM 5 O5' C A 139 108.943 28.537 -4.350 1.00 59.75 O
ATOM 6 C5' C A 139 109.812 29.364 -5.137 1.00 59.75 C
ATOM 7 C4' C A 139 110.402 30.439 -4.272 1.00 59.75 C
ATOM 8 O4' C A 139 109.345 31.313 -3.812 1.00 59.75 O
ATOM 9 C3' C A 139 111.067 29.931 -3.009 1.00 59.75 C
ATOM 10 O3' C A 139 112.416 29.600 -3.298 1.00 59.75 O
ATOM 11 C2' C A 139 110.942 31.112 -2.055 1.00 59.75 C
ATOM 12 O2' C A 139 111.970 32.057 -2.237 1.00 59.75 O
ATOM 13 C1' C A 139 109.622 31.742 -2.497 1.00 59.75 C
ATOM 14 N1 C A 139 108.461 31.442 -1.643 1.00 60.95 N
ATOM 15 C2 C A 139 108.300 32.165 -0.456 1.00 60.95 C
ATOM 16 O2 C A 139 109.155 33.012 -0.150 1.00 60.95 O
ATOM 17 N3 C A 139 107.223 31.925 0.327 1.00 60.95 N
ATOM 18 C4 C A 139 106.329 31.008 -0.037 1.00 60.95 C
ATOM 19 N4 C A 139 105.280 30.820 0.753 1.00 60.95 N
ATOM 20 C5 C A 139 106.472 30.246 -1.233 1.00 60.95 C
ATOM 21 C6 C A 139 107.544 30.491 -1.998 1.00 60.95 C
ATOM 22 P A A 140 113.331 28.907 -2.174 1.00 52.34 P
ATOM 23 OP1 A A 140 114.677 28.662 -2.794 1.00 52.63 O
ATOM 24 OP2 A A 140 112.569 27.767 -1.563 1.00 52.63 O
ATOM 25 O5' A A 140 113.472 30.032 -1.051 1.00 52.34 O
TER
ATOM 1 O3' U B 159 100.576 27.971 3.528 1.00 58.22 O
ATOM 2 P A B 160 100.020 29.184 2.645 1.00 57.88 P
ATOM 3 OP1 A B 160 98.538 29.079 2.563 1.00 59.01 O
ATOM 4 OP2 A B 160 100.830 29.198 1.386 1.00 59.01 O
ATOM 5 O5' A B 160 100.396 30.459 3.524 1.00 57.88 O
ATOM 6 C5' A B 160 99.966 30.555 4.897 1.00 57.88 C
ATOM 7 C4' A B 160 100.291 31.916 5.466 1.00 57.88 C
ATOM 8 O4' A B 160 101.699 32.018 5.786 1.00 57.88 O
ATOM 9 C3' A B 160 100.021 33.096 4.556 1.00 57.88 C
ATOM 10 O3' A B 160 98.660 33.465 4.586 1.00 57.88 O
ATOM 11 C2' A B 160 100.931 34.169 5.133 1.00 57.88 C
ATOM 12 O2' A B 160 100.376 34.762 6.292 1.00 57.88 O
ATOM 13 C1' A B 160 102.141 33.344 5.561 1.00 57.88 C
ATOM 14 N9 A B 160 103.221 33.308 4.573 1.00 59.01 N
ATOM 15 C8 A B 160 103.322 32.523 3.451 1.00 59.01 C
ATOM 16 N7 A B 160 104.453 32.669 2.806 1.00 59.01 N
ATOM 17 C5 A B 160 105.137 33.624 3.542 1.00 59.01 C
ATOM 18 C6 A B 160 106.410 34.197 3.395 1.00 59.01 C
ATOM 19 N6 A B 160 107.262 33.871 2.425 1.00 59.01 N
ATOM 20 N1 A B 160 106.788 35.124 4.297 1.00 59.01 N
ATOM 21 C2 A B 160 105.939 35.444 5.280 1.00 59.01 C
ATOM 22 N3 A B 160 104.725 34.970 5.529 1.00 59.01 N
ATOM 23 C4 A B 160 104.380 34.048 4.616 1.00 59.01 C
ATOM 24 P A B 161 97.980 34.055 3.261 1.00 56.55 P
ATOM 25 OP1 A B 161 96.510 33.971 3.429 1.00 45.38 O
ATOM 26 OP2 A B 161 98.626 33.400 2.081 1.00 45.38 O
ATOM 27 O5' A B 161 98.384 35.594 3.298 1.00 56.55 O
TER
Atoms:
C2: (108.300,32.165,-0.456)
OP1: (108.830,26.526,-5.853)
OP2: (107.099,26.912,-3.963)
C4: (106.329,31.008,-0.037)
O5': (108.943,28.537,-4.350)
C3': (111.067,29.931,-3.009)
C1': (109.622,31.742,-2.497)
O4': (109.345,31.313,-3.812)
C5': (109.812,29.364,-5.137)
P: (107.990,27.461,-5.034)
O2: (109.155,33.012,-0.150)
C4': (110.402,30.439,-4.272)
C2': (110.942,31.112,-2.055)
O2': (111.970,32.057,-2.237)
N1: (108.461,31.442,-1.643)
N3: (107.223,31.925,0.327)
N4: (105.280,30.820,0.753)
C6: (107.544,30.491,-1.998)
C5: (106.472,30.246,-1.233)
O3': (112.416,29.600,-3.298)
OP1: (108.830,26.526,-5.853)
OP2: (107.099,26.912,-3.963)
C4: (106.329,31.008,-0.037)
O5': (108.943,28.537,-4.350)
C3': (111.067,29.931,-3.009)
C1': (109.622,31.742,-2.497)
O4': (109.345,31.313,-3.812)
C5': (109.812,29.364,-5.137)
P: (107.990,27.461,-5.034)
O2: (109.155,33.012,-0.150)
C4': (110.402,30.439,-4.272)
C2': (110.942,31.112,-2.055)
O2': (111.970,32.057,-2.237)
N1: (108.461,31.442,-1.643)
N3: (107.223,31.925,0.327)
N4: (105.280,30.820,0.753)
C6: (107.544,30.491,-1.998)
C5: (106.472,30.246,-1.233)
O3': (112.416,29.600,-3.298)
OP1: (98.538,29.079,2.563)
OP2: (100.830,29.198,1.386)
C3': (100.021,33.096,4.556)
C1': (102.141,33.344,5.561)
C5': (99.966,30.555,4.897)
O4': (101.699,32.018,5.786)
C8: (103.322,32.523,3.451)
O2': (100.376,34.762,6.292)
C6: (106.410,34.197,3.395)
C5: (105.137,33.624,3.542)
C4: (104.380,34.048,4.616)
P: (100.020,29.184,2.645)
C4': (100.291,31.916,5.466)
C2': (100.931,34.169,5.133)
C2: (105.939,35.444,5.280)
N1: (106.788,35.124,4.297)
N3: (104.725,34.970,5.529)
N6: (107.262,33.871,2.425)
N7: (104.453,32.669,2.806)
N9: (103.221,33.308,4.573)
O5': (100.396,30.459,3.524)
O3': (98.660,33.465,4.586)
OP2: (100.830,29.198,1.386)
C3': (100.021,33.096,4.556)
C1': (102.141,33.344,5.561)
C5': (99.966,30.555,4.897)
O4': (101.699,32.018,5.786)
C8: (103.322,32.523,3.451)
O2': (100.376,34.762,6.292)
C6: (106.410,34.197,3.395)
C5: (105.137,33.624,3.542)
C4: (104.380,34.048,4.616)
P: (100.020,29.184,2.645)
C4': (100.291,31.916,5.466)
C2': (100.931,34.169,5.133)
C2: (105.939,35.444,5.280)
N1: (106.788,35.124,4.297)
N3: (104.725,34.970,5.529)
N6: (107.262,33.871,2.425)
N7: (104.453,32.669,2.806)
N9: (103.221,33.308,4.573)
O5': (100.396,30.459,3.524)
O3': (98.660,33.465,4.586)
Image (generated by PyMOL):