Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0493:0497
Extra
PDB:
ATOM 1 O3' G A 492 12.687 165.759 57.523 1.00 51.71 O
ATOM 2 P C A 493 12.122 164.287 57.222 1.00 53.04 P
ATOM 3 OP1 C A 493 11.054 164.393 56.195 1.00 53.71 O
ATOM 4 OP2 C A 493 11.830 163.625 58.520 1.00 54.13 O
ATOM 5 O5' C A 493 13.354 163.543 56.547 1.00 52.50 O
ATOM 6 C5' C A 493 13.895 164.018 55.306 1.00 52.41 C
ATOM 7 C4' C A 493 14.931 163.059 54.793 1.00 50.51 C
ATOM 8 O4' C A 493 16.038 163.014 55.725 1.00 50.07 O
ATOM 9 C3' C A 493 14.458 161.624 54.687 1.00 49.45 C
ATOM 10 O3' C A 493 13.771 161.423 53.455 1.00 48.63 O
ATOM 11 C2' C A 493 15.766 160.851 54.781 1.00 50.32 C
ATOM 12 O2' C A 493 16.488 160.852 53.563 1.00 49.64 O
ATOM 13 C1' C A 493 16.535 161.692 55.806 1.00 50.05 C
ATOM 14 N1 C A 493 16.415 161.238 57.204 1.00 49.31 N
ATOM 15 C2 C A 493 17.257 160.222 57.660 1.00 48.30 C
ATOM 16 O2 C A 493 18.063 159.717 56.877 1.00 49.40 O
ATOM 17 N3 C A 493 17.172 159.818 58.946 1.00 48.20 N
ATOM 18 C4 C A 493 16.294 160.391 59.767 1.00 49.14 C
ATOM 19 N4 C A 493 16.260 159.976 61.033 1.00 50.13 N
ATOM 20 C5 C A 493 15.413 161.420 59.329 1.00 49.97 C
ATOM 21 C6 C A 493 15.503 161.807 58.051 1.00 50.60 C
ATOM 22 P G A 494 12.430 160.539 53.417 1.00 46.93 P
ATOM 23 OP1 G A 494 11.870 160.674 52.056 1.00 46.52 O
ATOM 24 OP2 G A 494 11.582 160.855 54.602 1.00 46.15 O
ATOM 25 O5' G A 494 12.947 159.044 53.568 1.00 47.76 O
TER
ATOM 1 O3' A B 496 14.477 152.523 62.551 1.00 51.19 O
ATOM 2 P A B 497 14.529 153.969 63.247 1.00 54.75 P
ATOM 3 OP1 A B 497 13.777 153.885 64.523 1.00 54.90 O
ATOM 4 OP2 A B 497 14.160 154.997 62.242 1.00 53.30 O
ATOM 5 O5' A B 497 16.051 154.145 63.657 1.00 53.12 O
ATOM 6 C5' A B 497 17.053 154.253 62.664 1.00 54.31 C
ATOM 7 C4' A B 497 18.401 154.067 63.283 1.00 55.88 C
ATOM 8 O4' A B 497 19.404 154.197 62.251 1.00 56.95 O
ATOM 9 C3' A B 497 18.776 155.081 64.350 1.00 56.51 C
ATOM 10 O3' A B 497 19.671 154.496 65.279 1.00 60.32 O
ATOM 11 C2' A B 497 19.423 156.200 63.544 1.00 56.40 C
ATOM 12 O2' A B 497 20.437 156.873 64.261 1.00 55.50 O
ATOM 13 C1' A B 497 20.020 155.462 62.343 1.00 56.70 C
ATOM 14 N9 A B 497 19.779 156.175 61.085 1.00 56.55 N
ATOM 15 C8 A B 497 18.719 156.985 60.757 1.00 56.01 C
ATOM 16 N7 A B 497 18.825 157.541 59.577 1.00 56.50 N
ATOM 17 C5 A B 497 20.026 157.053 59.085 1.00 55.82 C
ATOM 18 C6 A B 497 20.721 157.279 57.882 1.00 55.71 C
ATOM 19 N6 A B 497 20.307 158.105 56.922 1.00 55.46 N
ATOM 20 N1 A B 497 21.883 156.624 57.701 1.00 56.47 N
ATOM 21 C2 A B 497 22.318 155.810 58.668 1.00 56.32 C
ATOM 22 N3 A B 497 21.767 155.527 59.842 1.00 56.07 N
ATOM 23 C4 A B 497 20.611 156.190 59.993 1.00 56.16 C
ATOM 24 P U B 498 19.468 154.755 66.852 1.00 62.08 P
ATOM 25 OP1 U B 498 18.023 154.627 67.163 1.00 61.49 O
ATOM 26 OP2 U B 498 20.185 155.993 67.225 1.00 62.42 O
ATOM 27 O5' U B 498 20.227 153.532 67.530 1.00 66.39 O
TER
ATOM 2 P C A 493 12.122 164.287 57.222 1.00 53.04 P
ATOM 3 OP1 C A 493 11.054 164.393 56.195 1.00 53.71 O
ATOM 4 OP2 C A 493 11.830 163.625 58.520 1.00 54.13 O
ATOM 5 O5' C A 493 13.354 163.543 56.547 1.00 52.50 O
ATOM 6 C5' C A 493 13.895 164.018 55.306 1.00 52.41 C
ATOM 7 C4' C A 493 14.931 163.059 54.793 1.00 50.51 C
ATOM 8 O4' C A 493 16.038 163.014 55.725 1.00 50.07 O
ATOM 9 C3' C A 493 14.458 161.624 54.687 1.00 49.45 C
ATOM 10 O3' C A 493 13.771 161.423 53.455 1.00 48.63 O
ATOM 11 C2' C A 493 15.766 160.851 54.781 1.00 50.32 C
ATOM 12 O2' C A 493 16.488 160.852 53.563 1.00 49.64 O
ATOM 13 C1' C A 493 16.535 161.692 55.806 1.00 50.05 C
ATOM 14 N1 C A 493 16.415 161.238 57.204 1.00 49.31 N
ATOM 15 C2 C A 493 17.257 160.222 57.660 1.00 48.30 C
ATOM 16 O2 C A 493 18.063 159.717 56.877 1.00 49.40 O
ATOM 17 N3 C A 493 17.172 159.818 58.946 1.00 48.20 N
ATOM 18 C4 C A 493 16.294 160.391 59.767 1.00 49.14 C
ATOM 19 N4 C A 493 16.260 159.976 61.033 1.00 50.13 N
ATOM 20 C5 C A 493 15.413 161.420 59.329 1.00 49.97 C
ATOM 21 C6 C A 493 15.503 161.807 58.051 1.00 50.60 C
ATOM 22 P G A 494 12.430 160.539 53.417 1.00 46.93 P
ATOM 23 OP1 G A 494 11.870 160.674 52.056 1.00 46.52 O
ATOM 24 OP2 G A 494 11.582 160.855 54.602 1.00 46.15 O
ATOM 25 O5' G A 494 12.947 159.044 53.568 1.00 47.76 O
TER
ATOM 1 O3' A B 496 14.477 152.523 62.551 1.00 51.19 O
ATOM 2 P A B 497 14.529 153.969 63.247 1.00 54.75 P
ATOM 3 OP1 A B 497 13.777 153.885 64.523 1.00 54.90 O
ATOM 4 OP2 A B 497 14.160 154.997 62.242 1.00 53.30 O
ATOM 5 O5' A B 497 16.051 154.145 63.657 1.00 53.12 O
ATOM 6 C5' A B 497 17.053 154.253 62.664 1.00 54.31 C
ATOM 7 C4' A B 497 18.401 154.067 63.283 1.00 55.88 C
ATOM 8 O4' A B 497 19.404 154.197 62.251 1.00 56.95 O
ATOM 9 C3' A B 497 18.776 155.081 64.350 1.00 56.51 C
ATOM 10 O3' A B 497 19.671 154.496 65.279 1.00 60.32 O
ATOM 11 C2' A B 497 19.423 156.200 63.544 1.00 56.40 C
ATOM 12 O2' A B 497 20.437 156.873 64.261 1.00 55.50 O
ATOM 13 C1' A B 497 20.020 155.462 62.343 1.00 56.70 C
ATOM 14 N9 A B 497 19.779 156.175 61.085 1.00 56.55 N
ATOM 15 C8 A B 497 18.719 156.985 60.757 1.00 56.01 C
ATOM 16 N7 A B 497 18.825 157.541 59.577 1.00 56.50 N
ATOM 17 C5 A B 497 20.026 157.053 59.085 1.00 55.82 C
ATOM 18 C6 A B 497 20.721 157.279 57.882 1.00 55.71 C
ATOM 19 N6 A B 497 20.307 158.105 56.922 1.00 55.46 N
ATOM 20 N1 A B 497 21.883 156.624 57.701 1.00 56.47 N
ATOM 21 C2 A B 497 22.318 155.810 58.668 1.00 56.32 C
ATOM 22 N3 A B 497 21.767 155.527 59.842 1.00 56.07 N
ATOM 23 C4 A B 497 20.611 156.190 59.993 1.00 56.16 C
ATOM 24 P U B 498 19.468 154.755 66.852 1.00 62.08 P
ATOM 25 OP1 U B 498 18.023 154.627 67.163 1.00 61.49 O
ATOM 26 OP2 U B 498 20.185 155.993 67.225 1.00 62.42 O
ATOM 27 O5' U B 498 20.227 153.532 67.530 1.00 66.39 O
TER
Atoms:
C2: (17.257,160.222,57.660)
OP1: (11.054,164.393,56.195)
OP2: (11.830,163.625,58.520)
C4: (16.294,160.391,59.767)
O5': (13.354,163.543,56.547)
C3': (14.458,161.624,54.687)
C1': (16.535,161.692,55.806)
O4': (16.038,163.014,55.725)
C5': (13.895,164.018,55.306)
P: (12.122,164.287,57.222)
O2: (18.063,159.717,56.877)
C4': (14.931,163.059,54.793)
C2': (15.766,160.851,54.781)
O2': (16.488,160.852,53.563)
N1: (16.415,161.238,57.204)
N3: (17.172,159.818,58.946)
N4: (16.260,159.976,61.033)
C6: (15.503,161.807,58.051)
C5: (15.413,161.420,59.329)
O3': (13.771,161.423,53.455)
OP1: (11.054,164.393,56.195)
OP2: (11.830,163.625,58.520)
C4: (16.294,160.391,59.767)
O5': (13.354,163.543,56.547)
C3': (14.458,161.624,54.687)
C1': (16.535,161.692,55.806)
O4': (16.038,163.014,55.725)
C5': (13.895,164.018,55.306)
P: (12.122,164.287,57.222)
O2: (18.063,159.717,56.877)
C4': (14.931,163.059,54.793)
C2': (15.766,160.851,54.781)
O2': (16.488,160.852,53.563)
N1: (16.415,161.238,57.204)
N3: (17.172,159.818,58.946)
N4: (16.260,159.976,61.033)
C6: (15.503,161.807,58.051)
C5: (15.413,161.420,59.329)
O3': (13.771,161.423,53.455)
OP1: (13.777,153.885,64.523)
OP2: (14.160,154.997,62.242)
C3': (18.776,155.081,64.350)
C1': (20.020,155.462,62.343)
C5': (17.053,154.253,62.664)
O4': (19.404,154.197,62.251)
C8: (18.719,156.985,60.757)
O2': (20.437,156.873,64.261)
C6: (20.721,157.279,57.882)
C5: (20.026,157.053,59.085)
C4: (20.611,156.190,59.993)
P: (14.529,153.969,63.247)
C4': (18.401,154.067,63.283)
C2': (19.423,156.200,63.544)
C2: (22.318,155.810,58.668)
N1: (21.883,156.624,57.701)
N3: (21.767,155.527,59.842)
N6: (20.307,158.105,56.922)
N7: (18.825,157.541,59.577)
N9: (19.779,156.175,61.085)
O5': (16.051,154.145,63.657)
O3': (19.671,154.496,65.279)
OP2: (14.160,154.997,62.242)
C3': (18.776,155.081,64.350)
C1': (20.020,155.462,62.343)
C5': (17.053,154.253,62.664)
O4': (19.404,154.197,62.251)
C8: (18.719,156.985,60.757)
O2': (20.437,156.873,64.261)
C6: (20.721,157.279,57.882)
C5: (20.026,157.053,59.085)
C4: (20.611,156.190,59.993)
P: (14.529,153.969,63.247)
C4': (18.401,154.067,63.283)
C2': (19.423,156.200,63.544)
C2: (22.318,155.810,58.668)
N1: (21.883,156.624,57.701)
N3: (21.767,155.527,59.842)
N6: (20.307,158.105,56.922)
N7: (18.825,157.541,59.577)
N9: (19.779,156.175,61.085)
O5': (16.051,154.145,63.657)
O3': (19.671,154.496,65.279)
Image (generated by PyMOL):