Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A312:A319
Extra
PDB:
ATOM 1 O3' A A 311 122.232 48.461 -16.111 1.00 65.14 O
ATOM 2 P C A 312 120.794 48.855 -15.505 1.00 65.92 P
ATOM 3 OP1 C A 312 119.777 48.311 -16.461 1.00 64.95 O
ATOM 4 OP2 C A 312 120.775 50.288 -15.157 1.00 64.30 O
ATOM 5 O5' C A 312 120.713 48.018 -14.144 1.00 66.42 O
ATOM 6 C5' C A 312 120.692 46.569 -14.150 1.00 63.50 C
ATOM 7 C4' C A 312 120.556 46.041 -12.738 1.00 61.50 C
ATOM 8 O4' C A 312 121.748 46.361 -11.979 1.00 60.43 O
ATOM 9 C3' C A 312 119.410 46.622 -11.922 1.00 60.66 C
ATOM 10 O3' C A 312 118.185 45.966 -12.187 1.00 59.12 O
ATOM 11 C2' C A 312 119.887 46.439 -10.486 1.00 61.36 C
ATOM 12 O2' C A 312 119.638 45.162 -9.943 1.00 61.97 O
ATOM 13 C1' C A 312 121.398 46.621 -10.631 1.00 62.01 C
ATOM 14 N1 C A 312 121.839 47.984 -10.277 1.00 63.87 N
ATOM 15 C2 C A 312 122.077 48.298 -8.917 1.00 65.02 C
ATOM 16 O2 C A 312 121.883 47.423 -8.041 1.00 65.88 O
ATOM 17 N3 C A 312 122.494 49.547 -8.596 1.00 63.86 N
ATOM 18 C4 C A 312 122.650 50.463 -9.551 1.00 63.45 C
ATOM 19 N4 C A 312 123.053 51.680 -9.192 1.00 63.07 N
ATOM 20 C5 C A 312 122.401 50.174 -10.925 1.00 64.83 C
ATOM 21 C6 C A 312 122.010 48.936 -11.242 1.00 63.36 C
ATOM 22 P U A 313 116.810 46.784 -12.082 1.00 59.87 P
ATOM 23 OP1 U A 313 115.707 45.846 -12.414 1.00 58.99 O
ATOM 24 OP2 U A 313 116.957 48.028 -12.861 1.00 62.16 O
ATOM 25 O5' U A 313 116.716 47.150 -10.534 1.00 60.84 O
TER
ATOM 1 O3' C B 318 128.129 56.628 -9.802 1.00 66.87 O
ATOM 2 P A B 319 128.643 55.321 -9.013 1.00 65.71 P
ATOM 3 OP1 A B 319 130.130 55.282 -9.108 1.00 64.84 O
ATOM 4 OP2 A B 319 127.835 54.179 -9.437 1.00 68.68 O
ATOM 5 O5' A B 319 128.307 55.643 -7.494 1.00 65.93 O
ATOM 6 C5' A B 319 127.499 56.780 -7.143 1.00 66.79 C
ATOM 7 C4' A B 319 126.898 56.613 -5.765 1.00 66.42 C
ATOM 8 O4' A B 319 125.635 55.899 -5.800 1.00 66.28 O
ATOM 9 C3' A B 319 127.763 55.944 -4.709 1.00 66.65 C
ATOM 10 O3' A B 319 127.602 56.668 -3.529 1.00 68.66 O
ATOM 11 C2' A B 319 127.111 54.572 -4.552 1.00 66.66 C
ATOM 12 O2' A B 319 127.261 53.993 -3.273 1.00 66.03 O
ATOM 13 C1' A B 319 125.640 54.905 -4.794 1.00 67.28 C
ATOM 14 N9 A B 319 124.847 53.760 -5.239 1.00 68.63 N
ATOM 15 C8 A B 319 124.463 53.432 -6.515 1.00 70.24 C
ATOM 16 N7 A B 319 123.753 52.336 -6.589 1.00 70.60 N
ATOM 17 C5 A B 319 123.659 51.910 -5.274 1.00 70.35 C
ATOM 18 C6 A B 319 123.034 50.799 -4.685 1.00 69.56 C
ATOM 19 N6 A B 319 122.361 49.871 -5.377 1.00 67.96 N
ATOM 20 N1 A B 319 123.127 50.668 -3.346 1.00 68.73 N
ATOM 21 C2 A B 319 123.811 51.589 -2.657 1.00 68.92 C
ATOM 22 N3 A B 319 124.448 52.671 -3.096 1.00 69.89 N
ATOM 23 C4 A B 319 124.329 52.777 -4.431 1.00 69.72 C
ATOM 24 P C B 320 128.575 57.903 -3.217 1.00 70.81 P
ATOM 25 OP1 C B 320 127.917 58.663 -2.099 1.00 71.27 O
ATOM 26 OP2 C B 320 128.895 58.559 -4.508 1.00 72.50 O
ATOM 27 O5' C B 320 129.877 57.240 -2.633 1.00 70.18 O
TER
ATOM 2 P C A 312 120.794 48.855 -15.505 1.00 65.92 P
ATOM 3 OP1 C A 312 119.777 48.311 -16.461 1.00 64.95 O
ATOM 4 OP2 C A 312 120.775 50.288 -15.157 1.00 64.30 O
ATOM 5 O5' C A 312 120.713 48.018 -14.144 1.00 66.42 O
ATOM 6 C5' C A 312 120.692 46.569 -14.150 1.00 63.50 C
ATOM 7 C4' C A 312 120.556 46.041 -12.738 1.00 61.50 C
ATOM 8 O4' C A 312 121.748 46.361 -11.979 1.00 60.43 O
ATOM 9 C3' C A 312 119.410 46.622 -11.922 1.00 60.66 C
ATOM 10 O3' C A 312 118.185 45.966 -12.187 1.00 59.12 O
ATOM 11 C2' C A 312 119.887 46.439 -10.486 1.00 61.36 C
ATOM 12 O2' C A 312 119.638 45.162 -9.943 1.00 61.97 O
ATOM 13 C1' C A 312 121.398 46.621 -10.631 1.00 62.01 C
ATOM 14 N1 C A 312 121.839 47.984 -10.277 1.00 63.87 N
ATOM 15 C2 C A 312 122.077 48.298 -8.917 1.00 65.02 C
ATOM 16 O2 C A 312 121.883 47.423 -8.041 1.00 65.88 O
ATOM 17 N3 C A 312 122.494 49.547 -8.596 1.00 63.86 N
ATOM 18 C4 C A 312 122.650 50.463 -9.551 1.00 63.45 C
ATOM 19 N4 C A 312 123.053 51.680 -9.192 1.00 63.07 N
ATOM 20 C5 C A 312 122.401 50.174 -10.925 1.00 64.83 C
ATOM 21 C6 C A 312 122.010 48.936 -11.242 1.00 63.36 C
ATOM 22 P U A 313 116.810 46.784 -12.082 1.00 59.87 P
ATOM 23 OP1 U A 313 115.707 45.846 -12.414 1.00 58.99 O
ATOM 24 OP2 U A 313 116.957 48.028 -12.861 1.00 62.16 O
ATOM 25 O5' U A 313 116.716 47.150 -10.534 1.00 60.84 O
TER
ATOM 1 O3' C B 318 128.129 56.628 -9.802 1.00 66.87 O
ATOM 2 P A B 319 128.643 55.321 -9.013 1.00 65.71 P
ATOM 3 OP1 A B 319 130.130 55.282 -9.108 1.00 64.84 O
ATOM 4 OP2 A B 319 127.835 54.179 -9.437 1.00 68.68 O
ATOM 5 O5' A B 319 128.307 55.643 -7.494 1.00 65.93 O
ATOM 6 C5' A B 319 127.499 56.780 -7.143 1.00 66.79 C
ATOM 7 C4' A B 319 126.898 56.613 -5.765 1.00 66.42 C
ATOM 8 O4' A B 319 125.635 55.899 -5.800 1.00 66.28 O
ATOM 9 C3' A B 319 127.763 55.944 -4.709 1.00 66.65 C
ATOM 10 O3' A B 319 127.602 56.668 -3.529 1.00 68.66 O
ATOM 11 C2' A B 319 127.111 54.572 -4.552 1.00 66.66 C
ATOM 12 O2' A B 319 127.261 53.993 -3.273 1.00 66.03 O
ATOM 13 C1' A B 319 125.640 54.905 -4.794 1.00 67.28 C
ATOM 14 N9 A B 319 124.847 53.760 -5.239 1.00 68.63 N
ATOM 15 C8 A B 319 124.463 53.432 -6.515 1.00 70.24 C
ATOM 16 N7 A B 319 123.753 52.336 -6.589 1.00 70.60 N
ATOM 17 C5 A B 319 123.659 51.910 -5.274 1.00 70.35 C
ATOM 18 C6 A B 319 123.034 50.799 -4.685 1.00 69.56 C
ATOM 19 N6 A B 319 122.361 49.871 -5.377 1.00 67.96 N
ATOM 20 N1 A B 319 123.127 50.668 -3.346 1.00 68.73 N
ATOM 21 C2 A B 319 123.811 51.589 -2.657 1.00 68.92 C
ATOM 22 N3 A B 319 124.448 52.671 -3.096 1.00 69.89 N
ATOM 23 C4 A B 319 124.329 52.777 -4.431 1.00 69.72 C
ATOM 24 P C B 320 128.575 57.903 -3.217 1.00 70.81 P
ATOM 25 OP1 C B 320 127.917 58.663 -2.099 1.00 71.27 O
ATOM 26 OP2 C B 320 128.895 58.559 -4.508 1.00 72.50 O
ATOM 27 O5' C B 320 129.877 57.240 -2.633 1.00 70.18 O
TER
Atoms:
C2: (122.077,48.298,-8.917)
OP1: (119.777,48.311,-16.461)
OP2: (120.775,50.288,-15.157)
C4: (122.650,50.463,-9.551)
O5': (120.713,48.018,-14.144)
C3': (119.410,46.622,-11.922)
C1': (121.398,46.621,-10.631)
O4': (121.748,46.361,-11.979)
C5': (120.692,46.569,-14.150)
P: (120.794,48.855,-15.505)
O2: (121.883,47.423,-8.041)
C4': (120.556,46.041,-12.738)
C2': (119.887,46.439,-10.486)
O2': (119.638,45.162,-9.943)
N1: (121.839,47.984,-10.277)
N3: (122.494,49.547,-8.596)
N4: (123.053,51.680,-9.192)
C6: (122.010,48.936,-11.242)
C5: (122.401,50.174,-10.925)
O3': (118.185,45.966,-12.187)
OP1: (119.777,48.311,-16.461)
OP2: (120.775,50.288,-15.157)
C4: (122.650,50.463,-9.551)
O5': (120.713,48.018,-14.144)
C3': (119.410,46.622,-11.922)
C1': (121.398,46.621,-10.631)
O4': (121.748,46.361,-11.979)
C5': (120.692,46.569,-14.150)
P: (120.794,48.855,-15.505)
O2: (121.883,47.423,-8.041)
C4': (120.556,46.041,-12.738)
C2': (119.887,46.439,-10.486)
O2': (119.638,45.162,-9.943)
N1: (121.839,47.984,-10.277)
N3: (122.494,49.547,-8.596)
N4: (123.053,51.680,-9.192)
C6: (122.010,48.936,-11.242)
C5: (122.401,50.174,-10.925)
O3': (118.185,45.966,-12.187)
OP1: (130.130,55.282,-9.108)
OP2: (127.835,54.179,-9.437)
C3': (127.763,55.944,-4.709)
C1': (125.640,54.905,-4.794)
C5': (127.499,56.780,-7.143)
O4': (125.635,55.899,-5.800)
C8: (124.463,53.432,-6.515)
O2': (127.261,53.993,-3.273)
C6: (123.034,50.799,-4.685)
C5: (123.659,51.910,-5.274)
C4: (124.329,52.777,-4.431)
P: (128.643,55.321,-9.013)
C4': (126.898,56.613,-5.765)
C2': (127.111,54.572,-4.552)
C2: (123.811,51.589,-2.657)
N1: (123.127,50.668,-3.346)
N3: (124.448,52.671,-3.096)
N6: (122.361,49.871,-5.377)
N7: (123.753,52.336,-6.589)
N9: (124.847,53.760,-5.239)
O5': (128.307,55.643,-7.494)
O3': (127.602,56.668,-3.529)
OP2: (127.835,54.179,-9.437)
C3': (127.763,55.944,-4.709)
C1': (125.640,54.905,-4.794)
C5': (127.499,56.780,-7.143)
O4': (125.635,55.899,-5.800)
C8: (124.463,53.432,-6.515)
O2': (127.261,53.993,-3.273)
C6: (123.034,50.799,-4.685)
C5: (123.659,51.910,-5.274)
C4: (124.329,52.777,-4.431)
P: (128.643,55.321,-9.013)
C4': (126.898,56.613,-5.765)
C2': (127.111,54.572,-4.552)
C2: (123.811,51.589,-2.657)
N1: (123.127,50.668,-3.346)
N3: (124.448,52.671,-3.096)
N6: (122.361,49.871,-5.377)
N7: (123.753,52.336,-6.589)
N9: (124.847,53.760,-5.239)
O5': (128.307,55.643,-7.494)
O3': (127.602,56.668,-3.529)
Image (generated by PyMOL):