Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:C15:C14
Extra
PDB:
ATOM 1 O3' U A 14 117.685 85.581 5.394 1.00 61.79 O
ATOM 2 P U A 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 3 OP1 U A 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 4 OP2 U A 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 5 O5' U A 15 119.152 86.334 7.320 1.00 59.49 O
ATOM 6 C5' U A 15 119.683 87.596 6.930 1.00 57.41 C
ATOM 7 C4' U A 15 119.541 88.605 8.040 1.00 56.84 C
ATOM 8 O4' U A 15 118.143 88.737 8.397 1.00 57.30 O
ATOM 9 C3' U A 15 120.209 88.276 9.365 1.00 57.16 C
ATOM 10 O3' U A 15 121.608 88.579 9.331 1.00 57.26 O
ATOM 11 C2' U A 15 119.464 89.208 10.317 1.00 56.72 C
ATOM 12 O2' U A 15 119.936 90.535 10.292 1.00 56.86 O
ATOM 13 C1' U A 15 118.043 89.157 9.749 1.00 56.87 C
ATOM 14 N1 U A 15 117.234 88.186 10.491 1.00 57.15 N
ATOM 15 C2 U A 15 116.703 88.599 11.705 1.00 57.59 C
ATOM 16 O2 U A 15 116.834 89.738 12.131 1.00 59.07 O
ATOM 17 N3 U A 15 116.022 87.633 12.403 1.00 56.87 N
ATOM 18 C4 U A 15 115.818 86.324 12.016 1.00 58.08 C
ATOM 19 O4 U A 15 115.284 85.536 12.803 1.00 59.42 O
ATOM 20 C5 U A 15 116.366 85.986 10.729 1.00 58.38 C
ATOM 21 C6 U A 15 117.036 86.908 10.027 1.00 57.41 C
ATOM 22 P A A 16 122.679 87.584 10.027 1.00 54.74 P
ATOM 23 OP1 A A 16 123.994 87.904 9.402 1.00 55.93 O
ATOM 24 OP2 A A 16 122.153 86.200 9.959 1.00 51.62 O
ATOM 25 O5' A A 16 122.707 88.033 11.556 1.00 51.92 O
TER
ATOM 1 O3' C B 13 112.394 82.340 6.077 1.00 63.52 O
ATOM 2 P U B 14 113.807 82.219 6.829 1.00 64.45 P
ATOM 3 OP1 U B 14 114.503 81.089 6.157 1.00 64.20 O
ATOM 4 OP2 U B 14 113.587 82.183 8.301 1.00 64.21 O
ATOM 5 O5' U B 14 114.544 83.590 6.513 1.00 61.52 O
ATOM 6 C5' U B 14 114.904 83.939 5.192 1.00 60.40 C
ATOM 7 C4' U B 14 115.277 85.390 5.151 1.00 60.81 C
ATOM 8 O4' U B 14 114.158 86.129 5.691 1.00 61.28 O
ATOM 9 C3' U B 14 116.437 85.774 6.057 1.00 61.32 C
ATOM 10 O3' U B 14 117.685 85.581 5.394 1.00 61.79 O
ATOM 11 C2' U B 14 116.157 87.245 6.365 1.00 61.93 C
ATOM 12 O2' U B 14 116.648 88.200 5.440 1.00 63.58 O
ATOM 13 C1' U B 14 114.629 87.279 6.367 1.00 61.39 C
ATOM 14 N1 U B 14 114.076 87.308 7.726 1.00 60.54 N
ATOM 15 C2 U B 14 114.064 88.535 8.358 1.00 61.33 C
ATOM 16 O2 U B 14 114.454 89.560 7.812 1.00 62.00 O
ATOM 17 N3 U B 14 113.585 88.524 9.643 1.00 60.70 N
ATOM 18 C4 U B 14 113.126 87.435 10.339 1.00 60.87 C
ATOM 19 O4 U B 14 112.800 87.573 11.513 1.00 63.75 O
ATOM 20 C5 U B 14 113.147 86.202 9.611 1.00 60.31 C
ATOM 21 C6 U B 14 113.610 86.181 8.357 1.00 60.01 C
ATOM 22 P U B 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 23 OP1 U B 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 24 OP2 U B 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 25 O5' U B 15 119.152 86.334 7.320 1.00 59.49 O
TER
ATOM 2 P U A 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 3 OP1 U A 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 4 OP2 U A 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 5 O5' U A 15 119.152 86.334 7.320 1.00 59.49 O
ATOM 6 C5' U A 15 119.683 87.596 6.930 1.00 57.41 C
ATOM 7 C4' U A 15 119.541 88.605 8.040 1.00 56.84 C
ATOM 8 O4' U A 15 118.143 88.737 8.397 1.00 57.30 O
ATOM 9 C3' U A 15 120.209 88.276 9.365 1.00 57.16 C
ATOM 10 O3' U A 15 121.608 88.579 9.331 1.00 57.26 O
ATOM 11 C2' U A 15 119.464 89.208 10.317 1.00 56.72 C
ATOM 12 O2' U A 15 119.936 90.535 10.292 1.00 56.86 O
ATOM 13 C1' U A 15 118.043 89.157 9.749 1.00 56.87 C
ATOM 14 N1 U A 15 117.234 88.186 10.491 1.00 57.15 N
ATOM 15 C2 U A 15 116.703 88.599 11.705 1.00 57.59 C
ATOM 16 O2 U A 15 116.834 89.738 12.131 1.00 59.07 O
ATOM 17 N3 U A 15 116.022 87.633 12.403 1.00 56.87 N
ATOM 18 C4 U A 15 115.818 86.324 12.016 1.00 58.08 C
ATOM 19 O4 U A 15 115.284 85.536 12.803 1.00 59.42 O
ATOM 20 C5 U A 15 116.366 85.986 10.729 1.00 58.38 C
ATOM 21 C6 U A 15 117.036 86.908 10.027 1.00 57.41 C
ATOM 22 P A A 16 122.679 87.584 10.027 1.00 54.74 P
ATOM 23 OP1 A A 16 123.994 87.904 9.402 1.00 55.93 O
ATOM 24 OP2 A A 16 122.153 86.200 9.959 1.00 51.62 O
ATOM 25 O5' A A 16 122.707 88.033 11.556 1.00 51.92 O
TER
ATOM 1 O3' C B 13 112.394 82.340 6.077 1.00 63.52 O
ATOM 2 P U B 14 113.807 82.219 6.829 1.00 64.45 P
ATOM 3 OP1 U B 14 114.503 81.089 6.157 1.00 64.20 O
ATOM 4 OP2 U B 14 113.587 82.183 8.301 1.00 64.21 O
ATOM 5 O5' U B 14 114.544 83.590 6.513 1.00 61.52 O
ATOM 6 C5' U B 14 114.904 83.939 5.192 1.00 60.40 C
ATOM 7 C4' U B 14 115.277 85.390 5.151 1.00 60.81 C
ATOM 8 O4' U B 14 114.158 86.129 5.691 1.00 61.28 O
ATOM 9 C3' U B 14 116.437 85.774 6.057 1.00 61.32 C
ATOM 10 O3' U B 14 117.685 85.581 5.394 1.00 61.79 O
ATOM 11 C2' U B 14 116.157 87.245 6.365 1.00 61.93 C
ATOM 12 O2' U B 14 116.648 88.200 5.440 1.00 63.58 O
ATOM 13 C1' U B 14 114.629 87.279 6.367 1.00 61.39 C
ATOM 14 N1 U B 14 114.076 87.308 7.726 1.00 60.54 N
ATOM 15 C2 U B 14 114.064 88.535 8.358 1.00 61.33 C
ATOM 16 O2 U B 14 114.454 89.560 7.812 1.00 62.00 O
ATOM 17 N3 U B 14 113.585 88.524 9.643 1.00 60.70 N
ATOM 18 C4 U B 14 113.126 87.435 10.339 1.00 60.87 C
ATOM 19 O4 U B 14 112.800 87.573 11.513 1.00 63.75 O
ATOM 20 C5 U B 14 113.147 86.202 9.611 1.00 60.31 C
ATOM 21 C6 U B 14 113.610 86.181 8.357 1.00 60.01 C
ATOM 22 P U B 15 118.994 85.166 6.242 1.00 61.19 P
ATOM 23 OP1 U B 15 120.147 85.240 5.303 1.00 60.96 O
ATOM 24 OP2 U B 15 118.702 83.893 6.945 1.00 60.04 O
ATOM 25 O5' U B 15 119.152 86.334 7.320 1.00 59.49 O
TER
Atoms:
C4: (115.818,86.324,12.016)
N3: (116.022,87.633,12.403)
OP1: (120.147,85.240,5.303)
OP2: (118.702,83.893,6.945)
C2: (116.703,88.599,11.705)
C1': (118.043,89.157,9.749)
C3': (120.209,88.276,9.365)
O5': (119.152,86.334,7.320)
O4': (118.143,88.737,8.397)
C5': (119.683,87.596,6.930)
P: (118.994,85.166,6.242)
C4': (119.541,88.605,8.040)
C2': (119.464,89.208,10.317)
O2': (119.936,90.535,10.292)
N1: (117.234,88.186,10.491)
O4: (115.284,85.536,12.803)
O2: (116.834,89.738,12.131)
C6: (117.036,86.908,10.027)
C5: (116.366,85.986,10.729)
O3': (121.608,88.579,9.331)
N3: (116.022,87.633,12.403)
OP1: (120.147,85.240,5.303)
OP2: (118.702,83.893,6.945)
C2: (116.703,88.599,11.705)
C1': (118.043,89.157,9.749)
C3': (120.209,88.276,9.365)
O5': (119.152,86.334,7.320)
O4': (118.143,88.737,8.397)
C5': (119.683,87.596,6.930)
P: (118.994,85.166,6.242)
C4': (119.541,88.605,8.040)
C2': (119.464,89.208,10.317)
O2': (119.936,90.535,10.292)
N1: (117.234,88.186,10.491)
O4: (115.284,85.536,12.803)
O2: (116.834,89.738,12.131)
C6: (117.036,86.908,10.027)
C5: (116.366,85.986,10.729)
O3': (121.608,88.579,9.331)
C4: (113.126,87.435,10.339)
N3: (113.585,88.524,9.643)
OP1: (114.503,81.089,6.157)
OP2: (113.587,82.183,8.301)
C2: (114.064,88.535,8.358)
C1': (114.629,87.279,6.367)
C3': (116.437,85.774,6.057)
O5': (114.544,83.590,6.513)
O4': (114.158,86.129,5.691)
C5': (114.904,83.939,5.192)
P: (113.807,82.219,6.829)
C4': (115.277,85.390,5.151)
C2': (116.157,87.245,6.365)
O2': (116.648,88.200,5.440)
N1: (114.076,87.308,7.726)
O4: (112.800,87.573,11.513)
O2: (114.454,89.560,7.812)
C6: (113.610,86.181,8.357)
C5: (113.147,86.202,9.611)
O3': (117.685,85.581,5.394)
N3: (113.585,88.524,9.643)
OP1: (114.503,81.089,6.157)
OP2: (113.587,82.183,8.301)
C2: (114.064,88.535,8.358)
C1': (114.629,87.279,6.367)
C3': (116.437,85.774,6.057)
O5': (114.544,83.590,6.513)
O4': (114.158,86.129,5.691)
C5': (114.904,83.939,5.192)
P: (113.807,82.219,6.829)
C4': (115.277,85.390,5.151)
C2': (116.157,87.245,6.365)
O2': (116.648,88.200,5.440)
N1: (114.076,87.308,7.726)
O4: (112.800,87.573,11.513)
O2: (114.454,89.560,7.812)
C6: (113.610,86.181,8.357)
C5: (113.147,86.202,9.611)
O3': (117.685,85.581,5.394)
Image (generated by PyMOL):