Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A5:A4
Extra
PDB:
ATOM 1 O3' U A 4 -7.849 1.463 -67.211 1.00 60.92 O
ATOM 2 P U A 5 -7.599 0.908 -65.735 1.00 67.71 P
ATOM 3 OP1 U A 5 -8.871 1.064 -64.995 1.00 72.03 O
ATOM 4 OP2 U A 5 -6.384 1.587 -65.226 1.00 59.51 O
ATOM 5 O5' U A 5 -7.301 -0.634 -65.976 1.00 44.21 O
ATOM 6 C5' U A 5 -8.269 -1.465 -66.582 1.00 43.44 C
ATOM 7 C4' U A 5 -7.639 -2.635 -67.293 1.00 52.11 C
ATOM 8 O4' U A 5 -6.650 -2.180 -68.265 1.00 53.99 O
ATOM 9 C3' U A 5 -6.868 -3.604 -66.425 1.00 52.62 C
ATOM 10 O3' U A 5 -7.710 -4.466 -65.672 1.00 44.78 O
ATOM 11 C2' U A 5 -5.981 -4.322 -67.449 1.00 56.95 C
ATOM 12 O2' U A 5 -6.706 -5.325 -68.151 1.00 55.73 O
ATOM 13 C1' U A 5 -5.655 -3.181 -68.426 1.00 59.65 C
ATOM 14 N1 U A 5 -4.308 -2.596 -68.159 1.00 63.45 N
ATOM 15 C2 U A 5 -3.225 -3.331 -68.626 1.00 56.40 C
ATOM 16 O2 U A 5 -3.352 -4.379 -69.238 1.00 44.70 O
ATOM 17 N3 U A 5 -1.986 -2.807 -68.341 1.00 60.47 N
ATOM 18 C4 U A 5 -1.709 -1.643 -67.651 1.00 60.96 C
ATOM 19 O4 U A 5 -0.531 -1.306 -67.493 1.00 60.40 O
ATOM 20 C5 U A 5 -2.871 -0.938 -67.189 1.00 57.59 C
ATOM 21 C6 U A 5 -4.094 -1.430 -67.446 1.00 61.93 C
ATOM 22 P A A 6 -7.329 -4.840 -64.151 1.00 69.60 P
ATOM 23 OP1 A A 6 -8.555 -5.364 -63.504 1.00 68.22 O
ATOM 24 OP2 A A 6 -6.669 -3.652 -63.561 1.00 70.26 O
ATOM 25 O5' A A 6 -6.271 -6.016 -64.334 1.00 60.55 O
TER
ATOM 1 O3' C B 3 -5.019 6.898 -68.744 1.00 86.39 O
ATOM 2 P U B 4 -4.970 6.126 -67.319 1.00 94.56 P
ATOM 3 OP1 U B 4 -5.963 6.786 -66.431 1.00 91.49 O
ATOM 4 OP2 U B 4 -3.556 6.086 -66.890 1.00 93.99 O
ATOM 5 O5' U B 4 -5.465 4.654 -67.684 1.00 51.38 O
ATOM 6 C5' U B 4 -6.819 4.403 -68.024 1.00 53.21 C
ATOM 7 C4' U B 4 -6.971 3.112 -68.791 1.00 61.82 C
ATOM 8 O4' U B 4 -5.974 3.039 -69.840 1.00 64.17 O
ATOM 9 C3' U B 4 -6.748 1.829 -68.006 1.00 64.04 C
ATOM 10 O3' U B 4 -7.849 1.463 -67.211 1.00 60.92 O
ATOM 11 C2' U B 4 -6.438 0.821 -69.099 1.00 69.73 C
ATOM 12 O2' U B 4 -7.638 0.385 -69.730 1.00 72.16 O
ATOM 13 C1' U B 4 -5.652 1.682 -70.089 1.00 67.26 C
ATOM 14 N1 U B 4 -4.181 1.496 -69.968 1.00 66.38 N
ATOM 15 C2 U B 4 -3.686 0.271 -70.383 1.00 69.82 C
ATOM 16 O2 U B 4 -4.395 -0.633 -70.782 1.00 71.95 O
ATOM 17 N3 U B 4 -2.328 0.120 -70.308 1.00 70.13 N
ATOM 18 C4 U B 4 -1.420 1.055 -69.876 1.00 69.07 C
ATOM 19 O4 U B 4 -0.229 0.739 -69.873 1.00 71.05 O
ATOM 20 C5 U B 4 -1.994 2.309 -69.470 1.00 64.56 C
ATOM 21 C6 U B 4 -3.324 2.484 -69.533 1.00 64.14 C
ATOM 22 P U B 5 -7.599 0.908 -65.735 1.00 67.71 P
ATOM 23 OP1 U B 5 -8.871 1.064 -64.995 1.00 72.03 O
ATOM 24 OP2 U B 5 -6.384 1.587 -65.226 1.00 59.51 O
ATOM 25 O5' U B 5 -7.301 -0.634 -65.976 1.00 44.21 O
TER
ATOM 2 P U A 5 -7.599 0.908 -65.735 1.00 67.71 P
ATOM 3 OP1 U A 5 -8.871 1.064 -64.995 1.00 72.03 O
ATOM 4 OP2 U A 5 -6.384 1.587 -65.226 1.00 59.51 O
ATOM 5 O5' U A 5 -7.301 -0.634 -65.976 1.00 44.21 O
ATOM 6 C5' U A 5 -8.269 -1.465 -66.582 1.00 43.44 C
ATOM 7 C4' U A 5 -7.639 -2.635 -67.293 1.00 52.11 C
ATOM 8 O4' U A 5 -6.650 -2.180 -68.265 1.00 53.99 O
ATOM 9 C3' U A 5 -6.868 -3.604 -66.425 1.00 52.62 C
ATOM 10 O3' U A 5 -7.710 -4.466 -65.672 1.00 44.78 O
ATOM 11 C2' U A 5 -5.981 -4.322 -67.449 1.00 56.95 C
ATOM 12 O2' U A 5 -6.706 -5.325 -68.151 1.00 55.73 O
ATOM 13 C1' U A 5 -5.655 -3.181 -68.426 1.00 59.65 C
ATOM 14 N1 U A 5 -4.308 -2.596 -68.159 1.00 63.45 N
ATOM 15 C2 U A 5 -3.225 -3.331 -68.626 1.00 56.40 C
ATOM 16 O2 U A 5 -3.352 -4.379 -69.238 1.00 44.70 O
ATOM 17 N3 U A 5 -1.986 -2.807 -68.341 1.00 60.47 N
ATOM 18 C4 U A 5 -1.709 -1.643 -67.651 1.00 60.96 C
ATOM 19 O4 U A 5 -0.531 -1.306 -67.493 1.00 60.40 O
ATOM 20 C5 U A 5 -2.871 -0.938 -67.189 1.00 57.59 C
ATOM 21 C6 U A 5 -4.094 -1.430 -67.446 1.00 61.93 C
ATOM 22 P A A 6 -7.329 -4.840 -64.151 1.00 69.60 P
ATOM 23 OP1 A A 6 -8.555 -5.364 -63.504 1.00 68.22 O
ATOM 24 OP2 A A 6 -6.669 -3.652 -63.561 1.00 70.26 O
ATOM 25 O5' A A 6 -6.271 -6.016 -64.334 1.00 60.55 O
TER
ATOM 1 O3' C B 3 -5.019 6.898 -68.744 1.00 86.39 O
ATOM 2 P U B 4 -4.970 6.126 -67.319 1.00 94.56 P
ATOM 3 OP1 U B 4 -5.963 6.786 -66.431 1.00 91.49 O
ATOM 4 OP2 U B 4 -3.556 6.086 -66.890 1.00 93.99 O
ATOM 5 O5' U B 4 -5.465 4.654 -67.684 1.00 51.38 O
ATOM 6 C5' U B 4 -6.819 4.403 -68.024 1.00 53.21 C
ATOM 7 C4' U B 4 -6.971 3.112 -68.791 1.00 61.82 C
ATOM 8 O4' U B 4 -5.974 3.039 -69.840 1.00 64.17 O
ATOM 9 C3' U B 4 -6.748 1.829 -68.006 1.00 64.04 C
ATOM 10 O3' U B 4 -7.849 1.463 -67.211 1.00 60.92 O
ATOM 11 C2' U B 4 -6.438 0.821 -69.099 1.00 69.73 C
ATOM 12 O2' U B 4 -7.638 0.385 -69.730 1.00 72.16 O
ATOM 13 C1' U B 4 -5.652 1.682 -70.089 1.00 67.26 C
ATOM 14 N1 U B 4 -4.181 1.496 -69.968 1.00 66.38 N
ATOM 15 C2 U B 4 -3.686 0.271 -70.383 1.00 69.82 C
ATOM 16 O2 U B 4 -4.395 -0.633 -70.782 1.00 71.95 O
ATOM 17 N3 U B 4 -2.328 0.120 -70.308 1.00 70.13 N
ATOM 18 C4 U B 4 -1.420 1.055 -69.876 1.00 69.07 C
ATOM 19 O4 U B 4 -0.229 0.739 -69.873 1.00 71.05 O
ATOM 20 C5 U B 4 -1.994 2.309 -69.470 1.00 64.56 C
ATOM 21 C6 U B 4 -3.324 2.484 -69.533 1.00 64.14 C
ATOM 22 P U B 5 -7.599 0.908 -65.735 1.00 67.71 P
ATOM 23 OP1 U B 5 -8.871 1.064 -64.995 1.00 72.03 O
ATOM 24 OP2 U B 5 -6.384 1.587 -65.226 1.00 59.51 O
ATOM 25 O5' U B 5 -7.301 -0.634 -65.976 1.00 44.21 O
TER
Atoms:
C4: (-1.709,-1.643,-67.651)
N3: (-1.986,-2.807,-68.341)
OP1: (-8.871,1.064,-64.995)
OP2: (-6.384,1.587,-65.226)
C2: (-3.225,-3.331,-68.626)
C1': (-5.655,-3.181,-68.426)
C3': (-6.868,-3.604,-66.425)
O5': (-7.301,-0.634,-65.976)
O4': (-6.650,-2.180,-68.265)
C5': (-8.269,-1.465,-66.582)
P: (-7.599,0.908,-65.735)
C4': (-7.639,-2.635,-67.293)
C2': (-5.981,-4.322,-67.449)
O2': (-6.706,-5.325,-68.151)
N1: (-4.308,-2.596,-68.159)
O4: (-0.531,-1.306,-67.493)
O2: (-3.352,-4.379,-69.238)
C6: (-4.094,-1.430,-67.446)
C5: (-2.871,-0.938,-67.189)
O3': (-7.710,-4.466,-65.672)
N3: (-1.986,-2.807,-68.341)
OP1: (-8.871,1.064,-64.995)
OP2: (-6.384,1.587,-65.226)
C2: (-3.225,-3.331,-68.626)
C1': (-5.655,-3.181,-68.426)
C3': (-6.868,-3.604,-66.425)
O5': (-7.301,-0.634,-65.976)
O4': (-6.650,-2.180,-68.265)
C5': (-8.269,-1.465,-66.582)
P: (-7.599,0.908,-65.735)
C4': (-7.639,-2.635,-67.293)
C2': (-5.981,-4.322,-67.449)
O2': (-6.706,-5.325,-68.151)
N1: (-4.308,-2.596,-68.159)
O4: (-0.531,-1.306,-67.493)
O2: (-3.352,-4.379,-69.238)
C6: (-4.094,-1.430,-67.446)
C5: (-2.871,-0.938,-67.189)
O3': (-7.710,-4.466,-65.672)
C4: (-1.420,1.055,-69.876)
N3: (-2.328,0.120,-70.308)
OP1: (-5.963,6.786,-66.431)
OP2: (-3.556,6.086,-66.890)
C2: (-3.686,0.271,-70.383)
C1': (-5.652,1.682,-70.089)
C3': (-6.748,1.829,-68.006)
O5': (-5.465,4.654,-67.684)
O4': (-5.974,3.039,-69.840)
C5': (-6.819,4.403,-68.024)
P: (-4.970,6.126,-67.319)
C4': (-6.971,3.112,-68.791)
C2': (-6.438,0.821,-69.099)
O2': (-7.638,0.385,-69.730)
N1: (-4.181,1.496,-69.968)
O4: (-0.229,0.739,-69.873)
O2: (-4.395,-0.633,-70.782)
C6: (-3.324,2.484,-69.533)
C5: (-1.994,2.309,-69.470)
O3': (-7.849,1.463,-67.211)
N3: (-2.328,0.120,-70.308)
OP1: (-5.963,6.786,-66.431)
OP2: (-3.556,6.086,-66.890)
C2: (-3.686,0.271,-70.383)
C1': (-5.652,1.682,-70.089)
C3': (-6.748,1.829,-68.006)
O5': (-5.465,4.654,-67.684)
O4': (-5.974,3.039,-69.840)
C5': (-6.819,4.403,-68.024)
P: (-4.970,6.126,-67.319)
C4': (-6.971,3.112,-68.791)
C2': (-6.438,0.821,-69.099)
O2': (-7.638,0.385,-69.730)
N1: (-4.181,1.496,-69.968)
O4: (-0.229,0.739,-69.873)
O2: (-4.395,-0.633,-70.782)
C6: (-3.324,2.484,-69.533)
C5: (-1.994,2.309,-69.470)
O3': (-7.849,1.463,-67.211)
Image (generated by PyMOL):