Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12794:12793
Extra
PDB:
ATOM 1 O3' U A2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 2 P U A2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 3 OP1 U A2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 4 OP2 U A2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 5 O5' U A2794 10.315 39.295 43.026 1.00 46.38 O
ATOM 6 C5' U A2794 10.252 37.897 43.157 1.00 45.95 C
ATOM 7 C4' U A2794 11.335 37.257 42.349 1.00 45.69 C
ATOM 8 O4' U A2794 11.125 37.570 40.949 1.00 46.04 O
ATOM 9 C3' U A2794 12.729 37.780 42.606 1.00 45.56 C
ATOM 10 O3' U A2794 13.330 37.274 43.760 1.00 45.15 O
ATOM 11 C2' U A2794 13.461 37.429 41.337 1.00 45.53 C
ATOM 12 O2' U A2794 13.799 36.070 41.325 1.00 45.09 O
ATOM 13 C1' U A2794 12.375 37.689 40.294 1.00 45.96 C
ATOM 14 N1 U A2794 12.506 39.053 39.774 1.00 46.43 N
ATOM 15 C2 U A2794 13.551 39.204 38.898 1.00 46.45 C
ATOM 16 O2 U A2794 14.252 38.276 38.492 1.00 46.13 O
ATOM 17 N3 U A2794 13.738 40.468 38.474 1.00 46.88 N
ATOM 18 C4 U A2794 13.053 41.548 38.842 1.00 47.27 C
ATOM 19 O4 U A2794 13.400 42.595 38.329 1.00 47.63 O
ATOM 20 C5 U A2794 12.031 41.321 39.797 1.00 47.21 C
ATOM 21 C6 U A2794 11.797 40.114 40.253 1.00 46.80 C
ATOM 22 P C A2795 14.334 38.210 44.560 1.00 44.78 P
ATOM 23 OP1 C A2795 14.757 37.468 45.759 1.00 44.34 O
ATOM 24 OP2 C A2795 13.675 39.492 44.717 1.00 45.26 O
ATOM 25 O5' C A2795 15.552 38.371 43.555 1.00 44.78 O
TER
ATOM 1 O3' A B2792 5.542 45.015 40.292 1.00 51.94 O
ATOM 2 P U B2793 6.845 44.689 41.174 1.00 53.01 P
ATOM 3 OP1 U B2793 6.411 44.807 42.592 1.00 52.92 O
ATOM 4 OP2 U B2793 7.981 45.536 40.683 1.00 53.16 O
ATOM 5 O5' U B2793 7.130 43.174 40.809 1.00 52.51 O
ATOM 6 C5' U B2793 6.222 42.162 41.154 1.00 52.30 C
ATOM 7 C4' U B2793 6.689 40.845 40.629 1.00 51.88 C
ATOM 8 O4' U B2793 6.867 40.932 39.205 1.00 52.11 O
ATOM 9 C3' U B2793 8.042 40.378 41.105 1.00 51.38 C
ATOM 10 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 11 C2' U B2793 8.396 39.360 40.048 1.00 51.18 C
ATOM 12 O2' U B2793 7.642 38.188 40.263 1.00 50.93 O
ATOM 13 C1' U B2793 7.849 40.023 38.796 1.00 51.71 C
ATOM 14 N1 U B2793 8.862 40.749 38.034 1.00 51.87 N
ATOM 15 C2 U B2793 9.865 40.030 37.396 1.00 51.57 C
ATOM 16 O2 U B2793 9.936 38.800 37.536 1.00 51.16 O
ATOM 17 N3 U B2793 10.782 40.761 36.630 1.00 51.77 N
ATOM 18 C4 U B2793 10.723 42.127 36.461 1.00 52.25 C
ATOM 19 O4 U B2793 11.576 42.709 35.792 1.00 52.41 O
ATOM 20 C5 U B2793 9.639 42.780 37.148 1.00 52.53 C
ATOM 21 C6 U B2793 8.762 42.095 37.891 1.00 52.34 C
ATOM 22 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 23 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 24 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 25 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
TER
ATOM 2 P U A2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 3 OP1 U A2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 4 OP2 U A2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 5 O5' U A2794 10.315 39.295 43.026 1.00 46.38 O
ATOM 6 C5' U A2794 10.252 37.897 43.157 1.00 45.95 C
ATOM 7 C4' U A2794 11.335 37.257 42.349 1.00 45.69 C
ATOM 8 O4' U A2794 11.125 37.570 40.949 1.00 46.04 O
ATOM 9 C3' U A2794 12.729 37.780 42.606 1.00 45.56 C
ATOM 10 O3' U A2794 13.330 37.274 43.760 1.00 45.15 O
ATOM 11 C2' U A2794 13.461 37.429 41.337 1.00 45.53 C
ATOM 12 O2' U A2794 13.799 36.070 41.325 1.00 45.09 O
ATOM 13 C1' U A2794 12.375 37.689 40.294 1.00 45.96 C
ATOM 14 N1 U A2794 12.506 39.053 39.774 1.00 46.43 N
ATOM 15 C2 U A2794 13.551 39.204 38.898 1.00 46.45 C
ATOM 16 O2 U A2794 14.252 38.276 38.492 1.00 46.13 O
ATOM 17 N3 U A2794 13.738 40.468 38.474 1.00 46.88 N
ATOM 18 C4 U A2794 13.053 41.548 38.842 1.00 47.27 C
ATOM 19 O4 U A2794 13.400 42.595 38.329 1.00 47.63 O
ATOM 20 C5 U A2794 12.031 41.321 39.797 1.00 47.21 C
ATOM 21 C6 U A2794 11.797 40.114 40.253 1.00 46.80 C
ATOM 22 P C A2795 14.334 38.210 44.560 1.00 44.78 P
ATOM 23 OP1 C A2795 14.757 37.468 45.759 1.00 44.34 O
ATOM 24 OP2 C A2795 13.675 39.492 44.717 1.00 45.26 O
ATOM 25 O5' C A2795 15.552 38.371 43.555 1.00 44.78 O
TER
ATOM 1 O3' A B2792 5.542 45.015 40.292 1.00 51.94 O
ATOM 2 P U B2793 6.845 44.689 41.174 1.00 53.01 P
ATOM 3 OP1 U B2793 6.411 44.807 42.592 1.00 52.92 O
ATOM 4 OP2 U B2793 7.981 45.536 40.683 1.00 53.16 O
ATOM 5 O5' U B2793 7.130 43.174 40.809 1.00 52.51 O
ATOM 6 C5' U B2793 6.222 42.162 41.154 1.00 52.30 C
ATOM 7 C4' U B2793 6.689 40.845 40.629 1.00 51.88 C
ATOM 8 O4' U B2793 6.867 40.932 39.205 1.00 52.11 O
ATOM 9 C3' U B2793 8.042 40.378 41.105 1.00 51.38 C
ATOM 10 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 11 C2' U B2793 8.396 39.360 40.048 1.00 51.18 C
ATOM 12 O2' U B2793 7.642 38.188 40.263 1.00 50.93 O
ATOM 13 C1' U B2793 7.849 40.023 38.796 1.00 51.71 C
ATOM 14 N1 U B2793 8.862 40.749 38.034 1.00 51.87 N
ATOM 15 C2 U B2793 9.865 40.030 37.396 1.00 51.57 C
ATOM 16 O2 U B2793 9.936 38.800 37.536 1.00 51.16 O
ATOM 17 N3 U B2793 10.782 40.761 36.630 1.00 51.77 N
ATOM 18 C4 U B2793 10.723 42.127 36.461 1.00 52.25 C
ATOM 19 O4 U B2793 11.576 42.709 35.792 1.00 52.41 O
ATOM 20 C5 U B2793 9.639 42.780 37.148 1.00 52.53 C
ATOM 21 C6 U B2793 8.762 42.095 37.891 1.00 52.34 C
ATOM 22 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 23 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 24 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 25 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
TER
Atoms:
C4: (13.053,41.548,38.842)
N3: (13.738,40.468,38.474)
OP1: (8.607,39.765,44.788)
OP2: (9.445,41.660,43.245)
C2: (13.551,39.204,38.898)
C1': (12.375,37.689,40.294)
C3': (12.729,37.780,42.606)
O5': (10.315,39.295,43.026)
O4': (11.125,37.570,40.949)
C5': (10.252,37.897,43.157)
P: (9.106,40.208,43.460)
C4': (11.335,37.257,42.349)
C2': (13.461,37.429,41.337)
O2': (13.799,36.070,41.325)
N1: (12.506,39.053,39.774)
O4: (13.400,42.595,38.329)
O2: (14.252,38.276,38.492)
C6: (11.797,40.114,40.253)
C5: (12.031,41.321,39.797)
O3': (13.330,37.274,43.760)
N3: (13.738,40.468,38.474)
OP1: (8.607,39.765,44.788)
OP2: (9.445,41.660,43.245)
C2: (13.551,39.204,38.898)
C1': (12.375,37.689,40.294)
C3': (12.729,37.780,42.606)
O5': (10.315,39.295,43.026)
O4': (11.125,37.570,40.949)
C5': (10.252,37.897,43.157)
P: (9.106,40.208,43.460)
C4': (11.335,37.257,42.349)
C2': (13.461,37.429,41.337)
O2': (13.799,36.070,41.325)
N1: (12.506,39.053,39.774)
O4: (13.400,42.595,38.329)
O2: (14.252,38.276,38.492)
C6: (11.797,40.114,40.253)
C5: (12.031,41.321,39.797)
O3': (13.330,37.274,43.760)
C4: (10.723,42.127,36.461)
N3: (10.782,40.761,36.630)
OP1: (6.411,44.807,42.592)
OP2: (7.981,45.536,40.683)
C2: (9.865,40.030,37.396)
C1': (7.849,40.023,38.796)
C3': (8.042,40.378,41.105)
O5': (7.130,43.174,40.809)
O4': (6.867,40.932,39.205)
C5': (6.222,42.162,41.154)
P: (6.845,44.689,41.174)
C4': (6.689,40.845,40.629)
C2': (8.396,39.360,40.048)
O2': (7.642,38.188,40.263)
N1: (8.862,40.749,38.034)
O4: (11.576,42.709,35.792)
O2: (9.936,38.800,37.536)
C6: (8.762,42.095,37.891)
C5: (9.639,42.780,37.148)
O3': (7.995,39.827,42.394)
N3: (10.782,40.761,36.630)
OP1: (6.411,44.807,42.592)
OP2: (7.981,45.536,40.683)
C2: (9.865,40.030,37.396)
C1': (7.849,40.023,38.796)
C3': (8.042,40.378,41.105)
O5': (7.130,43.174,40.809)
O4': (6.867,40.932,39.205)
C5': (6.222,42.162,41.154)
P: (6.845,44.689,41.174)
C4': (6.689,40.845,40.629)
C2': (8.396,39.360,40.048)
O2': (7.642,38.188,40.263)
N1: (8.862,40.749,38.034)
O4: (11.576,42.709,35.792)
O2: (9.936,38.800,37.536)
C6: (8.762,42.095,37.891)
C5: (9.639,42.780,37.148)
O3': (7.995,39.827,42.394)
Image (generated by PyMOL):