Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:E10:E9
Extra
PDB:
ATOM 1 O3' U A 9 -39.343 -0.674 14.584 1.00 43.32 O
ATOM 2 P U A 10 -38.975 0.845 14.936 1.00 36.96 P
ATOM 3 OP1 U A 10 -38.247 1.436 13.790 1.00 41.27 O
ATOM 4 OP2 U A 10 -38.342 0.830 16.281 1.00 33.60 O
ATOM 5 O5' U A 10 -40.396 1.552 15.049 1.00 42.26 O
ATOM 6 C5' U A 10 -41.335 1.472 13.979 1.00 46.06 C
ATOM 7 C4' U A 10 -42.663 2.047 14.406 1.00 52.66 C
ATOM 8 O4' U A 10 -43.269 1.193 15.413 1.00 55.85 O
ATOM 9 C3' U A 10 -42.576 3.409 15.071 1.00 53.52 C
ATOM 10 O3' U A 10 -42.550 4.444 14.104 1.00 49.72 O
ATOM 11 C2' U A 10 -43.851 3.444 15.898 1.00 54.47 C
ATOM 12 O2' U A 10 -44.985 3.778 15.121 1.00 60.06 O
ATOM 13 C1' U A 10 -43.936 1.992 16.378 1.00 53.83 C
ATOM 14 N1 U A 10 -43.273 1.793 17.674 1.00 52.98 N
ATOM 15 C2 U A 10 -43.970 2.144 18.814 1.00 57.17 C
ATOM 16 O2 U A 10 -45.103 2.597 18.784 1.00 64.87 O
ATOM 17 N3 U A 10 -43.293 1.945 19.992 1.00 53.56 N
ATOM 18 C4 U A 10 -42.018 1.443 20.142 1.00 51.42 C
ATOM 19 O4 U A 10 -41.537 1.339 21.273 1.00 48.04 O
ATOM 20 C5 U A 10 -41.366 1.100 18.915 1.00 51.17 C
ATOM 21 C6 U A 10 -42.000 1.282 17.753 1.00 49.25 C
ATOM 22 P U A 11 -41.758 5.799 14.422 1.00 43.90 P
ATOM 23 OP1 U A 11 -41.697 6.597 13.173 1.00 41.99 O
ATOM 24 OP2 U A 11 -40.501 5.418 15.113 1.00 42.97 O
ATOM 25 O5' U A 11 -42.697 6.549 15.466 1.00 47.60 O
TER
ATOM 1 O3' A B 8 -36.967 -5.106 17.922 1.00 35.48 O
ATOM 2 P U B 9 -36.675 -3.529 17.991 1.00 46.89 P
ATOM 3 OP1 U B 9 -35.389 -3.247 17.307 1.00 41.48 O
ATOM 4 OP2 U B 9 -36.855 -3.115 19.408 1.00 39.53 O
ATOM 5 O5' U B 9 -37.858 -2.900 17.131 1.00 27.97 O
ATOM 6 C5' U B 9 -38.127 -3.375 15.818 1.00 34.97 C
ATOM 7 C4' U B 9 -39.517 -2.971 15.387 1.00 46.90 C
ATOM 8 O4' U B 9 -40.513 -3.678 16.178 1.00 44.90 O
ATOM 9 C3' U B 9 -39.874 -1.511 15.599 1.00 47.64 C
ATOM 10 O3' U B 9 -39.343 -0.674 14.584 1.00 43.32 O
ATOM 11 C2' U B 9 -41.395 -1.561 15.573 1.00 42.85 C
ATOM 12 O2' U B 9 -41.924 -1.662 14.266 1.00 36.50 O
ATOM 13 C1' U B 9 -41.656 -2.851 16.351 1.00 41.62 C
ATOM 14 N1 U B 9 -41.817 -2.576 17.784 1.00 39.53 N
ATOM 15 C2 U B 9 -43.073 -2.219 18.231 1.00 44.50 C
ATOM 16 O2 U B 9 -44.050 -2.158 17.491 1.00 35.24 O
ATOM 17 N3 U B 9 -43.148 -1.937 19.575 1.00 40.30 N
ATOM 18 C4 U B 9 -42.118 -1.984 20.494 1.00 41.43 C
ATOM 19 O4 U B 9 -42.335 -1.675 21.665 1.00 46.83 O
ATOM 20 C5 U B 9 -40.858 -2.378 19.953 1.00 43.46 C
ATOM 21 C6 U B 9 -40.753 -2.654 18.649 1.00 43.21 C
ATOM 22 P U B 10 -38.975 0.845 14.936 1.00 36.96 P
ATOM 23 OP1 U B 10 -38.247 1.436 13.790 1.00 41.27 O
ATOM 24 OP2 U B 10 -38.342 0.830 16.281 1.00 33.60 O
ATOM 25 O5' U B 10 -40.396 1.552 15.049 1.00 42.26 O
TER
ATOM 2 P U A 10 -38.975 0.845 14.936 1.00 36.96 P
ATOM 3 OP1 U A 10 -38.247 1.436 13.790 1.00 41.27 O
ATOM 4 OP2 U A 10 -38.342 0.830 16.281 1.00 33.60 O
ATOM 5 O5' U A 10 -40.396 1.552 15.049 1.00 42.26 O
ATOM 6 C5' U A 10 -41.335 1.472 13.979 1.00 46.06 C
ATOM 7 C4' U A 10 -42.663 2.047 14.406 1.00 52.66 C
ATOM 8 O4' U A 10 -43.269 1.193 15.413 1.00 55.85 O
ATOM 9 C3' U A 10 -42.576 3.409 15.071 1.00 53.52 C
ATOM 10 O3' U A 10 -42.550 4.444 14.104 1.00 49.72 O
ATOM 11 C2' U A 10 -43.851 3.444 15.898 1.00 54.47 C
ATOM 12 O2' U A 10 -44.985 3.778 15.121 1.00 60.06 O
ATOM 13 C1' U A 10 -43.936 1.992 16.378 1.00 53.83 C
ATOM 14 N1 U A 10 -43.273 1.793 17.674 1.00 52.98 N
ATOM 15 C2 U A 10 -43.970 2.144 18.814 1.00 57.17 C
ATOM 16 O2 U A 10 -45.103 2.597 18.784 1.00 64.87 O
ATOM 17 N3 U A 10 -43.293 1.945 19.992 1.00 53.56 N
ATOM 18 C4 U A 10 -42.018 1.443 20.142 1.00 51.42 C
ATOM 19 O4 U A 10 -41.537 1.339 21.273 1.00 48.04 O
ATOM 20 C5 U A 10 -41.366 1.100 18.915 1.00 51.17 C
ATOM 21 C6 U A 10 -42.000 1.282 17.753 1.00 49.25 C
ATOM 22 P U A 11 -41.758 5.799 14.422 1.00 43.90 P
ATOM 23 OP1 U A 11 -41.697 6.597 13.173 1.00 41.99 O
ATOM 24 OP2 U A 11 -40.501 5.418 15.113 1.00 42.97 O
ATOM 25 O5' U A 11 -42.697 6.549 15.466 1.00 47.60 O
TER
ATOM 1 O3' A B 8 -36.967 -5.106 17.922 1.00 35.48 O
ATOM 2 P U B 9 -36.675 -3.529 17.991 1.00 46.89 P
ATOM 3 OP1 U B 9 -35.389 -3.247 17.307 1.00 41.48 O
ATOM 4 OP2 U B 9 -36.855 -3.115 19.408 1.00 39.53 O
ATOM 5 O5' U B 9 -37.858 -2.900 17.131 1.00 27.97 O
ATOM 6 C5' U B 9 -38.127 -3.375 15.818 1.00 34.97 C
ATOM 7 C4' U B 9 -39.517 -2.971 15.387 1.00 46.90 C
ATOM 8 O4' U B 9 -40.513 -3.678 16.178 1.00 44.90 O
ATOM 9 C3' U B 9 -39.874 -1.511 15.599 1.00 47.64 C
ATOM 10 O3' U B 9 -39.343 -0.674 14.584 1.00 43.32 O
ATOM 11 C2' U B 9 -41.395 -1.561 15.573 1.00 42.85 C
ATOM 12 O2' U B 9 -41.924 -1.662 14.266 1.00 36.50 O
ATOM 13 C1' U B 9 -41.656 -2.851 16.351 1.00 41.62 C
ATOM 14 N1 U B 9 -41.817 -2.576 17.784 1.00 39.53 N
ATOM 15 C2 U B 9 -43.073 -2.219 18.231 1.00 44.50 C
ATOM 16 O2 U B 9 -44.050 -2.158 17.491 1.00 35.24 O
ATOM 17 N3 U B 9 -43.148 -1.937 19.575 1.00 40.30 N
ATOM 18 C4 U B 9 -42.118 -1.984 20.494 1.00 41.43 C
ATOM 19 O4 U B 9 -42.335 -1.675 21.665 1.00 46.83 O
ATOM 20 C5 U B 9 -40.858 -2.378 19.953 1.00 43.46 C
ATOM 21 C6 U B 9 -40.753 -2.654 18.649 1.00 43.21 C
ATOM 22 P U B 10 -38.975 0.845 14.936 1.00 36.96 P
ATOM 23 OP1 U B 10 -38.247 1.436 13.790 1.00 41.27 O
ATOM 24 OP2 U B 10 -38.342 0.830 16.281 1.00 33.60 O
ATOM 25 O5' U B 10 -40.396 1.552 15.049 1.00 42.26 O
TER
Atoms:
C4: (-42.018,1.443,20.142)
N3: (-43.293,1.945,19.992)
OP1: (-38.247,1.436,13.790)
OP2: (-38.342,0.830,16.281)
C2: (-43.970,2.144,18.814)
C1': (-43.936,1.992,16.378)
C3': (-42.576,3.409,15.071)
O5': (-40.396,1.552,15.049)
O4': (-43.269,1.193,15.413)
C5': (-41.335,1.472,13.979)
P: (-38.975,0.845,14.936)
C4': (-42.663,2.047,14.406)
C2': (-43.851,3.444,15.898)
O2': (-44.985,3.778,15.121)
N1: (-43.273,1.793,17.674)
O4: (-41.537,1.339,21.273)
O2: (-45.103,2.597,18.784)
C6: (-42.000,1.282,17.753)
C5: (-41.366,1.100,18.915)
O3': (-42.550,4.444,14.104)
N3: (-43.293,1.945,19.992)
OP1: (-38.247,1.436,13.790)
OP2: (-38.342,0.830,16.281)
C2: (-43.970,2.144,18.814)
C1': (-43.936,1.992,16.378)
C3': (-42.576,3.409,15.071)
O5': (-40.396,1.552,15.049)
O4': (-43.269,1.193,15.413)
C5': (-41.335,1.472,13.979)
P: (-38.975,0.845,14.936)
C4': (-42.663,2.047,14.406)
C2': (-43.851,3.444,15.898)
O2': (-44.985,3.778,15.121)
N1: (-43.273,1.793,17.674)
O4: (-41.537,1.339,21.273)
O2: (-45.103,2.597,18.784)
C6: (-42.000,1.282,17.753)
C5: (-41.366,1.100,18.915)
O3': (-42.550,4.444,14.104)
C4: (-42.118,-1.984,20.494)
N3: (-43.148,-1.937,19.575)
OP1: (-35.389,-3.247,17.307)
OP2: (-36.855,-3.115,19.408)
C2: (-43.073,-2.219,18.231)
C1': (-41.656,-2.851,16.351)
C3': (-39.874,-1.511,15.599)
O5': (-37.858,-2.900,17.131)
O4': (-40.513,-3.678,16.178)
C5': (-38.127,-3.375,15.818)
P: (-36.675,-3.529,17.991)
C4': (-39.517,-2.971,15.387)
C2': (-41.395,-1.561,15.573)
O2': (-41.924,-1.662,14.266)
N1: (-41.817,-2.576,17.784)
O4: (-42.335,-1.675,21.665)
O2: (-44.050,-2.158,17.491)
C6: (-40.753,-2.654,18.649)
C5: (-40.858,-2.378,19.953)
O3': (-39.343,-0.674,14.584)
N3: (-43.148,-1.937,19.575)
OP1: (-35.389,-3.247,17.307)
OP2: (-36.855,-3.115,19.408)
C2: (-43.073,-2.219,18.231)
C1': (-41.656,-2.851,16.351)
C3': (-39.874,-1.511,15.599)
O5': (-37.858,-2.900,17.131)
O4': (-40.513,-3.678,16.178)
C5': (-38.127,-3.375,15.818)
P: (-36.675,-3.529,17.991)
C4': (-39.517,-2.971,15.387)
C2': (-41.395,-1.561,15.573)
O2': (-41.924,-1.662,14.266)
N1: (-41.817,-2.576,17.784)
O4: (-42.335,-1.675,21.665)
O2: (-44.050,-2.158,17.491)
C6: (-40.753,-2.654,18.649)
C5: (-40.858,-2.378,19.953)
O3': (-39.343,-0.674,14.584)
Image (generated by PyMOL):