Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01055:01054
Extra
PDB:
ATOM 1 O3' U A1054 9.245 94.757 110.348 1.00 48.89 O
ATOM 2 P U A1055 10.381 94.853 111.475 1.00 50.96 P
ATOM 3 OP1 U A1055 9.843 94.133 112.656 1.00 50.83 O
ATOM 4 OP2 U A1055 10.810 96.270 111.610 1.00 51.20 O
ATOM 5 O5' U A1055 11.568 93.975 110.872 1.00 50.36 O
ATOM 6 C5' U A1055 12.953 94.197 111.224 1.00 46.96 C
ATOM 7 C4' U A1055 13.850 93.526 110.202 1.00 45.10 C
ATOM 8 O4' U A1055 13.634 94.137 108.903 1.00 45.65 O
ATOM 9 C3' U A1055 15.347 93.645 110.418 1.00 42.52 C
ATOM 10 O3' U A1055 15.834 92.632 111.270 1.00 42.40 O
ATOM 11 C2' U A1055 15.882 93.439 109.017 1.00 42.24 C
ATOM 12 O2' U A1055 15.801 92.075 108.665 1.00 38.41 O
ATOM 13 C1' U A1055 14.864 94.235 108.205 1.00 42.88 C
ATOM 14 N1 U A1055 15.197 95.666 108.072 1.00 43.82 N
ATOM 15 C2 U A1055 16.236 96.026 107.220 1.00 44.61 C
ATOM 16 O2 U A1055 16.899 95.215 106.593 1.00 44.24 O
ATOM 17 N3 U A1055 16.465 97.378 107.128 1.00 45.48 N
ATOM 18 C4 U A1055 15.784 98.389 107.783 1.00 46.57 C
ATOM 19 O4 U A1055 16.088 99.568 107.569 1.00 46.64 O
ATOM 20 C5 U A1055 14.738 97.937 108.649 1.00 44.68 C
ATOM 21 C6 U A1055 14.489 96.629 108.763 1.00 43.50 C
ATOM 22 P A A1056 17.184 92.878 112.087 1.00 43.31 P
ATOM 23 OP1 A A1056 17.429 91.650 112.884 1.00 41.71 O
ATOM 24 OP2 A A1056 17.055 94.189 112.770 1.00 38.98 O
ATOM 25 O5' A A1056 18.300 93.008 110.956 1.00 42.57 O
TER
ATOM 1 O3' G B1053 5.641 98.581 107.097 1.00 50.98 O
ATOM 2 P U B1054 6.559 98.647 108.429 1.00 50.94 P
ATOM 3 OP1 U B1054 5.699 98.318 109.598 1.00 50.16 O
ATOM 4 OP2 U B1054 7.327 99.918 108.435 1.00 50.00 O
ATOM 5 O5' U B1054 7.564 97.430 108.254 1.00 47.65 O
ATOM 6 C5' U B1054 7.103 96.086 108.384 1.00 46.48 C
ATOM 7 C4' U B1054 8.245 95.123 108.188 1.00 48.82 C
ATOM 8 O4' U B1054 8.770 95.251 106.841 1.00 50.62 O
ATOM 9 C3' U B1054 9.465 95.322 109.069 1.00 47.65 C
ATOM 10 O3' U B1054 9.245 94.757 110.348 1.00 48.89 O
ATOM 11 C2' U B1054 10.534 94.582 108.278 1.00 49.41 C
ATOM 12 O2' U B1054 10.434 93.175 108.401 1.00 50.11 O
ATOM 13 C1' U B1054 10.157 94.964 106.847 1.00 50.28 C
ATOM 14 N1 U B1054 10.884 96.144 106.362 1.00 50.62 N
ATOM 15 C2 U B1054 12.079 95.927 105.708 1.00 51.80 C
ATOM 16 O2 U B1054 12.537 94.815 105.526 1.00 52.84 O
ATOM 17 N3 U B1054 12.719 97.060 105.274 1.00 52.74 N
ATOM 18 C4 U B1054 12.288 98.363 105.425 1.00 54.64 C
ATOM 19 O4 U B1054 12.974 99.286 104.975 1.00 56.44 O
ATOM 20 C5 U B1054 11.040 98.503 106.115 1.00 53.59 C
ATOM 21 C6 U B1054 10.399 97.416 106.548 1.00 52.01 C
ATOM 22 P U B1055 10.381 94.853 111.475 1.00 50.96 P
ATOM 23 OP1 U B1055 9.843 94.133 112.656 1.00 50.83 O
ATOM 24 OP2 U B1055 10.810 96.270 111.610 1.00 51.20 O
ATOM 25 O5' U B1055 11.568 93.975 110.872 1.00 50.36 O
TER
ATOM 2 P U A1055 10.381 94.853 111.475 1.00 50.96 P
ATOM 3 OP1 U A1055 9.843 94.133 112.656 1.00 50.83 O
ATOM 4 OP2 U A1055 10.810 96.270 111.610 1.00 51.20 O
ATOM 5 O5' U A1055 11.568 93.975 110.872 1.00 50.36 O
ATOM 6 C5' U A1055 12.953 94.197 111.224 1.00 46.96 C
ATOM 7 C4' U A1055 13.850 93.526 110.202 1.00 45.10 C
ATOM 8 O4' U A1055 13.634 94.137 108.903 1.00 45.65 O
ATOM 9 C3' U A1055 15.347 93.645 110.418 1.00 42.52 C
ATOM 10 O3' U A1055 15.834 92.632 111.270 1.00 42.40 O
ATOM 11 C2' U A1055 15.882 93.439 109.017 1.00 42.24 C
ATOM 12 O2' U A1055 15.801 92.075 108.665 1.00 38.41 O
ATOM 13 C1' U A1055 14.864 94.235 108.205 1.00 42.88 C
ATOM 14 N1 U A1055 15.197 95.666 108.072 1.00 43.82 N
ATOM 15 C2 U A1055 16.236 96.026 107.220 1.00 44.61 C
ATOM 16 O2 U A1055 16.899 95.215 106.593 1.00 44.24 O
ATOM 17 N3 U A1055 16.465 97.378 107.128 1.00 45.48 N
ATOM 18 C4 U A1055 15.784 98.389 107.783 1.00 46.57 C
ATOM 19 O4 U A1055 16.088 99.568 107.569 1.00 46.64 O
ATOM 20 C5 U A1055 14.738 97.937 108.649 1.00 44.68 C
ATOM 21 C6 U A1055 14.489 96.629 108.763 1.00 43.50 C
ATOM 22 P A A1056 17.184 92.878 112.087 1.00 43.31 P
ATOM 23 OP1 A A1056 17.429 91.650 112.884 1.00 41.71 O
ATOM 24 OP2 A A1056 17.055 94.189 112.770 1.00 38.98 O
ATOM 25 O5' A A1056 18.300 93.008 110.956 1.00 42.57 O
TER
ATOM 1 O3' G B1053 5.641 98.581 107.097 1.00 50.98 O
ATOM 2 P U B1054 6.559 98.647 108.429 1.00 50.94 P
ATOM 3 OP1 U B1054 5.699 98.318 109.598 1.00 50.16 O
ATOM 4 OP2 U B1054 7.327 99.918 108.435 1.00 50.00 O
ATOM 5 O5' U B1054 7.564 97.430 108.254 1.00 47.65 O
ATOM 6 C5' U B1054 7.103 96.086 108.384 1.00 46.48 C
ATOM 7 C4' U B1054 8.245 95.123 108.188 1.00 48.82 C
ATOM 8 O4' U B1054 8.770 95.251 106.841 1.00 50.62 O
ATOM 9 C3' U B1054 9.465 95.322 109.069 1.00 47.65 C
ATOM 10 O3' U B1054 9.245 94.757 110.348 1.00 48.89 O
ATOM 11 C2' U B1054 10.534 94.582 108.278 1.00 49.41 C
ATOM 12 O2' U B1054 10.434 93.175 108.401 1.00 50.11 O
ATOM 13 C1' U B1054 10.157 94.964 106.847 1.00 50.28 C
ATOM 14 N1 U B1054 10.884 96.144 106.362 1.00 50.62 N
ATOM 15 C2 U B1054 12.079 95.927 105.708 1.00 51.80 C
ATOM 16 O2 U B1054 12.537 94.815 105.526 1.00 52.84 O
ATOM 17 N3 U B1054 12.719 97.060 105.274 1.00 52.74 N
ATOM 18 C4 U B1054 12.288 98.363 105.425 1.00 54.64 C
ATOM 19 O4 U B1054 12.974 99.286 104.975 1.00 56.44 O
ATOM 20 C5 U B1054 11.040 98.503 106.115 1.00 53.59 C
ATOM 21 C6 U B1054 10.399 97.416 106.548 1.00 52.01 C
ATOM 22 P U B1055 10.381 94.853 111.475 1.00 50.96 P
ATOM 23 OP1 U B1055 9.843 94.133 112.656 1.00 50.83 O
ATOM 24 OP2 U B1055 10.810 96.270 111.610 1.00 51.20 O
ATOM 25 O5' U B1055 11.568 93.975 110.872 1.00 50.36 O
TER
Atoms:
C4: (15.784,98.389,107.783)
N3: (16.465,97.378,107.128)
OP1: (9.843,94.133,112.656)
OP2: (10.810,96.270,111.610)
C2: (16.236,96.026,107.220)
C1': (14.864,94.235,108.205)
C3': (15.347,93.645,110.418)
O5': (11.568,93.975,110.872)
O4': (13.634,94.137,108.903)
C5': (12.953,94.197,111.224)
P: (10.381,94.853,111.475)
C4': (13.850,93.526,110.202)
C2': (15.882,93.439,109.017)
O2': (15.801,92.075,108.665)
N1: (15.197,95.666,108.072)
O4: (16.088,99.568,107.569)
O2: (16.899,95.215,106.593)
C6: (14.489,96.629,108.763)
C5: (14.738,97.937,108.649)
O3': (15.834,92.632,111.270)
N3: (16.465,97.378,107.128)
OP1: (9.843,94.133,112.656)
OP2: (10.810,96.270,111.610)
C2: (16.236,96.026,107.220)
C1': (14.864,94.235,108.205)
C3': (15.347,93.645,110.418)
O5': (11.568,93.975,110.872)
O4': (13.634,94.137,108.903)
C5': (12.953,94.197,111.224)
P: (10.381,94.853,111.475)
C4': (13.850,93.526,110.202)
C2': (15.882,93.439,109.017)
O2': (15.801,92.075,108.665)
N1: (15.197,95.666,108.072)
O4: (16.088,99.568,107.569)
O2: (16.899,95.215,106.593)
C6: (14.489,96.629,108.763)
C5: (14.738,97.937,108.649)
O3': (15.834,92.632,111.270)
C4: (12.288,98.363,105.425)
N3: (12.719,97.060,105.274)
OP1: (5.699,98.318,109.598)
OP2: (7.327,99.918,108.435)
C2: (12.079,95.927,105.708)
C1': (10.157,94.964,106.847)
C3': (9.465,95.322,109.069)
O5': (7.564,97.430,108.254)
O4': (8.770,95.251,106.841)
C5': (7.103,96.086,108.384)
P: (6.559,98.647,108.429)
C4': (8.245,95.123,108.188)
C2': (10.534,94.582,108.278)
O2': (10.434,93.175,108.401)
N1: (10.884,96.144,106.362)
O4: (12.974,99.286,104.975)
O2: (12.537,94.815,105.526)
C6: (10.399,97.416,106.548)
C5: (11.040,98.503,106.115)
O3': (9.245,94.757,110.348)
N3: (12.719,97.060,105.274)
OP1: (5.699,98.318,109.598)
OP2: (7.327,99.918,108.435)
C2: (12.079,95.927,105.708)
C1': (10.157,94.964,106.847)
C3': (9.465,95.322,109.069)
O5': (7.564,97.430,108.254)
O4': (8.770,95.251,106.841)
C5': (7.103,96.086,108.384)
P: (6.559,98.647,108.429)
C4': (8.245,95.123,108.188)
C2': (10.534,94.582,108.278)
O2': (10.434,93.175,108.401)
N1: (10.884,96.144,106.362)
O4: (12.974,99.286,104.975)
O2: (12.537,94.815,105.526)
C6: (10.399,97.416,106.548)
C5: (11.040,98.503,106.115)
O3': (9.245,94.757,110.348)
Image (generated by PyMOL):