Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GIS:A4:A3
Extra
PDB:
ATOM 1 O3' U A 3 55.179 44.108 43.677 1.00 60.33 O
ATOM 2 P U A 4 54.205 43.531 42.537 1.00 60.31 P
ATOM 3 OP1 U A 4 53.567 42.301 43.067 1.00 60.80 O
ATOM 4 OP2 U A 4 54.982 43.466 41.269 1.00 61.31 O
ATOM 5 O5' U A 4 53.102 44.672 42.382 1.00 57.62 O
ATOM 6 C5' U A 4 52.176 44.937 43.427 1.00 56.18 C
ATOM 7 C4' U A 4 51.450 46.221 43.143 1.00 55.97 C
ATOM 8 O4' U A 4 52.432 47.275 43.039 1.00 55.58 O
ATOM 9 C3' U A 4 50.695 46.272 41.826 1.00 56.58 C
ATOM 10 O3' U A 4 49.393 45.733 41.981 1.00 58.63 O
ATOM 11 C2' U A 4 50.663 47.767 41.536 1.00 55.50 C
ATOM 12 O2' U A 4 49.696 48.452 42.301 1.00 56.71 O
ATOM 13 C1' U A 4 52.048 48.188 42.023 1.00 54.24 C
ATOM 14 N1 U A 4 53.071 48.125 40.974 1.00 50.31 N
ATOM 15 C2 U A 4 53.197 49.208 40.124 1.00 48.81 C
ATOM 16 O2 U A 4 52.488 50.194 40.204 1.00 48.14 O
ATOM 17 N3 U A 4 54.188 49.091 39.181 1.00 47.64 N
ATOM 18 C4 U A 4 55.044 48.019 39.011 1.00 49.86 C
ATOM 19 O4 U A 4 55.897 48.060 38.122 1.00 53.10 O
ATOM 20 C5 U A 4 54.843 46.933 39.930 1.00 49.29 C
ATOM 21 C6 U A 4 53.886 47.020 40.854 1.00 48.98 C
ATOM 22 P A A 5 48.651 45.080 40.719 1.00 60.24 P
ATOM 23 OP1 A A 5 47.527 44.256 41.233 1.00 60.47 O
ATOM 24 OP2 A A 5 49.696 44.440 39.882 1.00 58.91 O
ATOM 25 O5' A A 5 48.047 46.341 39.956 1.00 56.95 O
TER
ATOM 1 O3' C B 2 61.022 43.789 41.941 1.00 55.57 O
ATOM 2 P U B 3 59.622 43.553 41.204 1.00 57.98 P
ATOM 3 OP1 U B 3 59.364 42.082 41.244 1.00 57.52 O
ATOM 4 OP2 U B 3 59.681 44.265 39.900 1.00 59.29 O
ATOM 5 O5' U B 3 58.561 44.348 42.088 1.00 53.55 O
ATOM 6 C5' U B 3 58.363 44.011 43.446 1.00 53.36 C
ATOM 7 C4' U B 3 57.410 44.981 44.081 1.00 55.02 C
ATOM 8 O4' U B 3 57.989 46.313 44.050 1.00 55.96 O
ATOM 9 C3' U B 3 56.097 45.142 43.346 1.00 57.18 C
ATOM 10 O3' U B 3 55.179 44.108 43.677 1.00 60.33 O
ATOM 11 C2' U B 3 55.642 46.516 43.814 1.00 54.53 C
ATOM 12 O2' U B 3 55.165 46.437 45.140 1.00 55.14 O
ATOM 13 C1' U B 3 56.967 47.272 43.829 1.00 52.98 C
ATOM 14 N1 U B 3 57.269 47.986 42.580 1.00 49.42 N
ATOM 15 C2 U B 3 56.614 49.174 42.350 1.00 47.24 C
ATOM 16 O2 U B 3 55.771 49.612 43.103 1.00 45.38 O
ATOM 17 N3 U B 3 56.978 49.829 41.207 1.00 46.59 N
ATOM 18 C4 U B 3 57.903 49.416 40.282 1.00 48.90 C
ATOM 19 O4 U B 3 58.117 50.111 39.282 1.00 50.34 O
ATOM 20 C5 U B 3 58.523 48.162 40.580 1.00 48.98 C
ATOM 21 C6 U B 3 58.187 47.505 41.691 1.00 49.39 C
ATOM 22 P U B 4 54.205 43.531 42.537 1.00 60.31 P
ATOM 23 OP1 U B 4 53.567 42.301 43.067 1.00 60.80 O
ATOM 24 OP2 U B 4 54.982 43.466 41.269 1.00 61.31 O
ATOM 25 O5' U B 4 53.102 44.672 42.382 1.00 57.62 O
TER
ATOM 2 P U A 4 54.205 43.531 42.537 1.00 60.31 P
ATOM 3 OP1 U A 4 53.567 42.301 43.067 1.00 60.80 O
ATOM 4 OP2 U A 4 54.982 43.466 41.269 1.00 61.31 O
ATOM 5 O5' U A 4 53.102 44.672 42.382 1.00 57.62 O
ATOM 6 C5' U A 4 52.176 44.937 43.427 1.00 56.18 C
ATOM 7 C4' U A 4 51.450 46.221 43.143 1.00 55.97 C
ATOM 8 O4' U A 4 52.432 47.275 43.039 1.00 55.58 O
ATOM 9 C3' U A 4 50.695 46.272 41.826 1.00 56.58 C
ATOM 10 O3' U A 4 49.393 45.733 41.981 1.00 58.63 O
ATOM 11 C2' U A 4 50.663 47.767 41.536 1.00 55.50 C
ATOM 12 O2' U A 4 49.696 48.452 42.301 1.00 56.71 O
ATOM 13 C1' U A 4 52.048 48.188 42.023 1.00 54.24 C
ATOM 14 N1 U A 4 53.071 48.125 40.974 1.00 50.31 N
ATOM 15 C2 U A 4 53.197 49.208 40.124 1.00 48.81 C
ATOM 16 O2 U A 4 52.488 50.194 40.204 1.00 48.14 O
ATOM 17 N3 U A 4 54.188 49.091 39.181 1.00 47.64 N
ATOM 18 C4 U A 4 55.044 48.019 39.011 1.00 49.86 C
ATOM 19 O4 U A 4 55.897 48.060 38.122 1.00 53.10 O
ATOM 20 C5 U A 4 54.843 46.933 39.930 1.00 49.29 C
ATOM 21 C6 U A 4 53.886 47.020 40.854 1.00 48.98 C
ATOM 22 P A A 5 48.651 45.080 40.719 1.00 60.24 P
ATOM 23 OP1 A A 5 47.527 44.256 41.233 1.00 60.47 O
ATOM 24 OP2 A A 5 49.696 44.440 39.882 1.00 58.91 O
ATOM 25 O5' A A 5 48.047 46.341 39.956 1.00 56.95 O
TER
ATOM 1 O3' C B 2 61.022 43.789 41.941 1.00 55.57 O
ATOM 2 P U B 3 59.622 43.553 41.204 1.00 57.98 P
ATOM 3 OP1 U B 3 59.364 42.082 41.244 1.00 57.52 O
ATOM 4 OP2 U B 3 59.681 44.265 39.900 1.00 59.29 O
ATOM 5 O5' U B 3 58.561 44.348 42.088 1.00 53.55 O
ATOM 6 C5' U B 3 58.363 44.011 43.446 1.00 53.36 C
ATOM 7 C4' U B 3 57.410 44.981 44.081 1.00 55.02 C
ATOM 8 O4' U B 3 57.989 46.313 44.050 1.00 55.96 O
ATOM 9 C3' U B 3 56.097 45.142 43.346 1.00 57.18 C
ATOM 10 O3' U B 3 55.179 44.108 43.677 1.00 60.33 O
ATOM 11 C2' U B 3 55.642 46.516 43.814 1.00 54.53 C
ATOM 12 O2' U B 3 55.165 46.437 45.140 1.00 55.14 O
ATOM 13 C1' U B 3 56.967 47.272 43.829 1.00 52.98 C
ATOM 14 N1 U B 3 57.269 47.986 42.580 1.00 49.42 N
ATOM 15 C2 U B 3 56.614 49.174 42.350 1.00 47.24 C
ATOM 16 O2 U B 3 55.771 49.612 43.103 1.00 45.38 O
ATOM 17 N3 U B 3 56.978 49.829 41.207 1.00 46.59 N
ATOM 18 C4 U B 3 57.903 49.416 40.282 1.00 48.90 C
ATOM 19 O4 U B 3 58.117 50.111 39.282 1.00 50.34 O
ATOM 20 C5 U B 3 58.523 48.162 40.580 1.00 48.98 C
ATOM 21 C6 U B 3 58.187 47.505 41.691 1.00 49.39 C
ATOM 22 P U B 4 54.205 43.531 42.537 1.00 60.31 P
ATOM 23 OP1 U B 4 53.567 42.301 43.067 1.00 60.80 O
ATOM 24 OP2 U B 4 54.982 43.466 41.269 1.00 61.31 O
ATOM 25 O5' U B 4 53.102 44.672 42.382 1.00 57.62 O
TER
Atoms:
C4: (55.044,48.019,39.011)
N3: (54.188,49.091,39.181)
OP1: (53.567,42.301,43.067)
OP2: (54.982,43.466,41.269)
C2: (53.197,49.208,40.124)
C1': (52.048,48.188,42.023)
C3': (50.695,46.272,41.826)
O5': (53.102,44.672,42.382)
O4': (52.432,47.275,43.039)
C5': (52.176,44.937,43.427)
P: (54.205,43.531,42.537)
C4': (51.450,46.221,43.143)
C2': (50.663,47.767,41.536)
O2': (49.696,48.452,42.301)
N1: (53.071,48.125,40.974)
O4: (55.897,48.060,38.122)
O2: (52.488,50.194,40.204)
C6: (53.886,47.020,40.854)
C5: (54.843,46.933,39.930)
O3': (49.393,45.733,41.981)
N3: (54.188,49.091,39.181)
OP1: (53.567,42.301,43.067)
OP2: (54.982,43.466,41.269)
C2: (53.197,49.208,40.124)
C1': (52.048,48.188,42.023)
C3': (50.695,46.272,41.826)
O5': (53.102,44.672,42.382)
O4': (52.432,47.275,43.039)
C5': (52.176,44.937,43.427)
P: (54.205,43.531,42.537)
C4': (51.450,46.221,43.143)
C2': (50.663,47.767,41.536)
O2': (49.696,48.452,42.301)
N1: (53.071,48.125,40.974)
O4: (55.897,48.060,38.122)
O2: (52.488,50.194,40.204)
C6: (53.886,47.020,40.854)
C5: (54.843,46.933,39.930)
O3': (49.393,45.733,41.981)
C4: (57.903,49.416,40.282)
N3: (56.978,49.829,41.207)
OP1: (59.364,42.082,41.244)
OP2: (59.681,44.265,39.900)
C2: (56.614,49.174,42.350)
C1': (56.967,47.272,43.829)
C3': (56.097,45.142,43.346)
O5': (58.561,44.348,42.088)
O4': (57.989,46.313,44.050)
C5': (58.363,44.011,43.446)
P: (59.622,43.553,41.204)
C4': (57.410,44.981,44.081)
C2': (55.642,46.516,43.814)
O2': (55.165,46.437,45.140)
N1: (57.269,47.986,42.580)
O4: (58.117,50.111,39.282)
O2: (55.771,49.612,43.103)
C6: (58.187,47.505,41.691)
C5: (58.523,48.162,40.580)
O3': (55.179,44.108,43.677)
N3: (56.978,49.829,41.207)
OP1: (59.364,42.082,41.244)
OP2: (59.681,44.265,39.900)
C2: (56.614,49.174,42.350)
C1': (56.967,47.272,43.829)
C3': (56.097,45.142,43.346)
O5': (58.561,44.348,42.088)
O4': (57.989,46.313,44.050)
C5': (58.363,44.011,43.446)
P: (59.622,43.553,41.204)
C4': (57.410,44.981,44.081)
C2': (55.642,46.516,43.814)
O2': (55.165,46.437,45.140)
N1: (57.269,47.986,42.580)
O4: (58.117,50.111,39.282)
O2: (55.771,49.612,43.103)
C6: (58.187,47.505,41.691)
C5: (58.523,48.162,40.580)
O3': (55.179,44.108,43.677)
Image (generated by PyMOL):