Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HJW:E12:E11
Extra
PDB:
ATOM 1 O3' U A 11 11.811 -11.108 40.424 1.00 70.84 O
ATOM 2 P U A 12 10.294 -11.055 39.898 1.00 72.40 P
ATOM 3 OP1 U A 12 9.506 -11.948 40.785 1.00 72.94 O
ATOM 4 OP2 U A 12 10.238 -11.263 38.431 1.00 72.07 O
ATOM 5 O5' U A 12 9.874 -9.539 40.204 1.00 73.09 O
ATOM 6 C5' U A 12 9.927 -9.022 41.542 1.00 73.65 C
ATOM 7 C4' U A 12 10.305 -7.550 41.565 1.00 73.62 C
ATOM 8 O4' U A 12 11.586 -7.344 40.908 1.00 73.26 O
ATOM 9 C3' U A 12 9.342 -6.619 40.833 1.00 73.59 C
ATOM 10 O3' U A 12 8.198 -6.315 41.638 1.00 73.12 O
ATOM 11 C2' U A 12 10.238 -5.406 40.570 1.00 73.54 C
ATOM 12 O2' U A 12 10.316 -4.503 41.660 1.00 74.01 O
ATOM 13 C1' U A 12 11.605 -6.055 40.313 1.00 72.97 C
ATOM 14 N1 U A 12 11.926 -6.120 38.838 1.00 72.66 N
ATOM 15 C2 U A 12 12.541 -5.030 38.237 1.00 72.33 C
ATOM 16 O2 U A 12 12.854 -4.016 38.838 1.00 72.27 O
ATOM 17 N3 U A 12 12.784 -5.168 36.888 1.00 72.00 N
ATOM 18 C4 U A 12 12.477 -6.261 36.093 1.00 71.94 C
ATOM 19 O4 U A 12 12.756 -6.242 34.899 1.00 71.84 O
ATOM 20 C5 U A 12 11.837 -7.356 36.782 1.00 72.20 C
ATOM 21 C6 U A 12 11.589 -7.244 38.095 1.00 72.43 C
TER
ATOM 1 O3' U B 10 15.511 -14.080 36.069 1.00 67.71 O
ATOM 2 P U B 11 14.036 -13.589 35.714 1.00 68.52 P
ATOM 3 OP1 U B 11 13.351 -14.657 34.951 1.00 68.89 O
ATOM 4 OP2 U B 11 14.106 -12.223 35.135 1.00 68.52 O
ATOM 5 O5' U B 11 13.399 -13.525 37.175 1.00 68.77 O
ATOM 6 C5' U B 11 12.916 -12.294 37.649 1.00 69.01 C
ATOM 7 C4' U B 11 13.539 -11.927 38.981 1.00 69.18 C
ATOM 8 O4' U B 11 14.945 -11.586 38.821 1.00 68.62 O
ATOM 9 C3' U B 11 12.883 -10.699 39.592 1.00 69.57 C
ATOM 10 O3' U B 11 11.811 -11.108 40.424 1.00 70.84 O
ATOM 11 C2' U B 11 14.039 -10.050 40.349 1.00 68.98 C
ATOM 12 O2' U B 11 14.280 -10.635 41.616 1.00 68.98 O
ATOM 13 C1' U B 11 15.202 -10.307 39.383 1.00 67.95 C
ATOM 14 N1 U B 11 15.349 -9.262 38.281 1.00 67.13 N
ATOM 15 C2 U B 11 15.626 -7.937 38.602 1.00 66.75 C
ATOM 16 O2 U B 11 15.772 -7.521 39.743 1.00 66.51 O
ATOM 17 N3 U B 11 15.730 -7.087 37.520 1.00 66.44 N
ATOM 18 C4 U B 11 15.595 -7.408 36.177 1.00 66.28 C
ATOM 19 O4 U B 11 15.715 -6.534 35.324 1.00 66.16 O
ATOM 20 C5 U B 11 15.307 -8.797 35.915 1.00 66.43 C
ATOM 21 C6 U B 11 15.204 -9.642 36.951 1.00 66.70 C
ATOM 22 P U B 12 10.294 -11.055 39.898 1.00 72.40 P
ATOM 23 OP1 U B 12 9.506 -11.948 40.785 1.00 72.94 O
ATOM 24 OP2 U B 12 10.238 -11.263 38.431 1.00 72.07 O
ATOM 25 O5' U B 12 9.874 -9.539 40.204 1.00 73.09 O
TER
ATOM 2 P U A 12 10.294 -11.055 39.898 1.00 72.40 P
ATOM 3 OP1 U A 12 9.506 -11.948 40.785 1.00 72.94 O
ATOM 4 OP2 U A 12 10.238 -11.263 38.431 1.00 72.07 O
ATOM 5 O5' U A 12 9.874 -9.539 40.204 1.00 73.09 O
ATOM 6 C5' U A 12 9.927 -9.022 41.542 1.00 73.65 C
ATOM 7 C4' U A 12 10.305 -7.550 41.565 1.00 73.62 C
ATOM 8 O4' U A 12 11.586 -7.344 40.908 1.00 73.26 O
ATOM 9 C3' U A 12 9.342 -6.619 40.833 1.00 73.59 C
ATOM 10 O3' U A 12 8.198 -6.315 41.638 1.00 73.12 O
ATOM 11 C2' U A 12 10.238 -5.406 40.570 1.00 73.54 C
ATOM 12 O2' U A 12 10.316 -4.503 41.660 1.00 74.01 O
ATOM 13 C1' U A 12 11.605 -6.055 40.313 1.00 72.97 C
ATOM 14 N1 U A 12 11.926 -6.120 38.838 1.00 72.66 N
ATOM 15 C2 U A 12 12.541 -5.030 38.237 1.00 72.33 C
ATOM 16 O2 U A 12 12.854 -4.016 38.838 1.00 72.27 O
ATOM 17 N3 U A 12 12.784 -5.168 36.888 1.00 72.00 N
ATOM 18 C4 U A 12 12.477 -6.261 36.093 1.00 71.94 C
ATOM 19 O4 U A 12 12.756 -6.242 34.899 1.00 71.84 O
ATOM 20 C5 U A 12 11.837 -7.356 36.782 1.00 72.20 C
ATOM 21 C6 U A 12 11.589 -7.244 38.095 1.00 72.43 C
TER
ATOM 1 O3' U B 10 15.511 -14.080 36.069 1.00 67.71 O
ATOM 2 P U B 11 14.036 -13.589 35.714 1.00 68.52 P
ATOM 3 OP1 U B 11 13.351 -14.657 34.951 1.00 68.89 O
ATOM 4 OP2 U B 11 14.106 -12.223 35.135 1.00 68.52 O
ATOM 5 O5' U B 11 13.399 -13.525 37.175 1.00 68.77 O
ATOM 6 C5' U B 11 12.916 -12.294 37.649 1.00 69.01 C
ATOM 7 C4' U B 11 13.539 -11.927 38.981 1.00 69.18 C
ATOM 8 O4' U B 11 14.945 -11.586 38.821 1.00 68.62 O
ATOM 9 C3' U B 11 12.883 -10.699 39.592 1.00 69.57 C
ATOM 10 O3' U B 11 11.811 -11.108 40.424 1.00 70.84 O
ATOM 11 C2' U B 11 14.039 -10.050 40.349 1.00 68.98 C
ATOM 12 O2' U B 11 14.280 -10.635 41.616 1.00 68.98 O
ATOM 13 C1' U B 11 15.202 -10.307 39.383 1.00 67.95 C
ATOM 14 N1 U B 11 15.349 -9.262 38.281 1.00 67.13 N
ATOM 15 C2 U B 11 15.626 -7.937 38.602 1.00 66.75 C
ATOM 16 O2 U B 11 15.772 -7.521 39.743 1.00 66.51 O
ATOM 17 N3 U B 11 15.730 -7.087 37.520 1.00 66.44 N
ATOM 18 C4 U B 11 15.595 -7.408 36.177 1.00 66.28 C
ATOM 19 O4 U B 11 15.715 -6.534 35.324 1.00 66.16 O
ATOM 20 C5 U B 11 15.307 -8.797 35.915 1.00 66.43 C
ATOM 21 C6 U B 11 15.204 -9.642 36.951 1.00 66.70 C
ATOM 22 P U B 12 10.294 -11.055 39.898 1.00 72.40 P
ATOM 23 OP1 U B 12 9.506 -11.948 40.785 1.00 72.94 O
ATOM 24 OP2 U B 12 10.238 -11.263 38.431 1.00 72.07 O
ATOM 25 O5' U B 12 9.874 -9.539 40.204 1.00 73.09 O
TER
Atoms:
C4: (12.477,-6.261,36.093)
N3: (12.784,-5.168,36.888)
OP1: (9.506,-11.948,40.785)
OP2: (10.238,-11.263,38.431)
C2: (12.541,-5.030,38.237)
C1': (11.605,-6.055,40.313)
C3': (9.342,-6.619,40.833)
O5': (9.874,-9.539,40.204)
O4': (11.586,-7.344,40.908)
C5': (9.927,-9.022,41.542)
P: (10.294,-11.055,39.898)
C4': (10.305,-7.550,41.565)
C2': (10.238,-5.406,40.570)
O2': (10.316,-4.503,41.660)
N1: (11.926,-6.120,38.838)
O4: (12.756,-6.242,34.899)
O2: (12.854,-4.016,38.838)
C6: (11.589,-7.244,38.095)
C5: (11.837,-7.356,36.782)
O3': (8.198,-6.315,41.638)
N3: (12.784,-5.168,36.888)
OP1: (9.506,-11.948,40.785)
OP2: (10.238,-11.263,38.431)
C2: (12.541,-5.030,38.237)
C1': (11.605,-6.055,40.313)
C3': (9.342,-6.619,40.833)
O5': (9.874,-9.539,40.204)
O4': (11.586,-7.344,40.908)
C5': (9.927,-9.022,41.542)
P: (10.294,-11.055,39.898)
C4': (10.305,-7.550,41.565)
C2': (10.238,-5.406,40.570)
O2': (10.316,-4.503,41.660)
N1: (11.926,-6.120,38.838)
O4: (12.756,-6.242,34.899)
O2: (12.854,-4.016,38.838)
C6: (11.589,-7.244,38.095)
C5: (11.837,-7.356,36.782)
O3': (8.198,-6.315,41.638)
C4: (15.595,-7.408,36.177)
N3: (15.730,-7.087,37.520)
OP1: (13.351,-14.657,34.951)
OP2: (14.106,-12.223,35.135)
C2: (15.626,-7.937,38.602)
C1': (15.202,-10.307,39.383)
C3': (12.883,-10.699,39.592)
O5': (13.399,-13.525,37.175)
O4': (14.945,-11.586,38.821)
C5': (12.916,-12.294,37.649)
P: (14.036,-13.589,35.714)
C4': (13.539,-11.927,38.981)
C2': (14.039,-10.050,40.349)
O2': (14.280,-10.635,41.616)
N1: (15.349,-9.262,38.281)
O4: (15.715,-6.534,35.324)
O2: (15.772,-7.521,39.743)
C6: (15.204,-9.642,36.951)
C5: (15.307,-8.797,35.915)
O3': (11.811,-11.108,40.424)
N3: (15.730,-7.087,37.520)
OP1: (13.351,-14.657,34.951)
OP2: (14.106,-12.223,35.135)
C2: (15.626,-7.937,38.602)
C1': (15.202,-10.307,39.383)
C3': (12.883,-10.699,39.592)
O5': (13.399,-13.525,37.175)
O4': (14.945,-11.586,38.821)
C5': (12.916,-12.294,37.649)
P: (14.036,-13.589,35.714)
C4': (13.539,-11.927,38.981)
C2': (14.039,-10.050,40.349)
O2': (14.280,-10.635,41.616)
N1: (15.349,-9.262,38.281)
O4: (15.715,-6.534,35.324)
O2: (15.772,-7.521,39.743)
C6: (15.204,-9.642,36.951)
C5: (15.307,-8.797,35.915)
O3': (11.811,-11.108,40.424)
Image (generated by PyMOL):