Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X98:X97
Extra
PDB:
ATOM 1 O3' U A 97 9.272 14.398 7.076 1.00 31.63 O
ATOM 2 P U A 98 8.808 12.880 7.311 1.00 38.49 P
ATOM 3 OP1 U A 98 7.425 12.834 6.768 1.00 38.70 O
ATOM 4 OP2 U A 98 9.088 12.446 8.708 1.00 36.39 O
ATOM 5 O5' U A 98 9.769 12.041 6.357 1.00 30.93 O
ATOM 6 C5' U A 98 9.683 12.209 4.953 1.00 34.35 C
ATOM 7 C4' U A 98 10.657 11.297 4.262 1.00 30.97 C
ATOM 8 O4' U A 98 12.015 11.682 4.599 1.00 25.55 O
ATOM 9 C3' U A 98 10.608 9.839 4.676 1.00 30.39 C
ATOM 10 O3' U A 98 9.499 9.137 4.139 1.00 35.24 O
ATOM 11 C2' U A 98 11.968 9.340 4.201 1.00 29.75 C
ATOM 12 O2' U A 98 11.996 9.178 2.790 1.00 29.17 O
ATOM 13 C1' U A 98 12.845 10.539 4.560 1.00 27.36 C
ATOM 14 N1 U A 98 13.501 10.293 5.854 1.00 25.60 N
ATOM 15 C2 U A 98 14.706 9.638 5.822 1.00 25.88 C
ATOM 16 O2 U A 98 15.232 9.275 4.777 1.00 24.92 O
ATOM 17 N3 U A 98 15.274 9.424 7.052 1.00 24.67 N
ATOM 18 C4 U A 98 14.754 9.796 8.281 1.00 26.22 C
ATOM 19 O4 U A 98 15.376 9.539 9.316 1.00 23.88 O
ATOM 20 C5 U A 98 13.495 10.470 8.221 1.00 26.98 C
ATOM 21 C6 U A 98 12.923 10.691 7.030 1.00 29.18 C
ATOM 22 P U A 99 9.045 7.721 4.747 1.00 36.65 P
ATOM 23 OP1 U A 99 7.829 7.336 3.987 1.00 43.63 O
ATOM 24 OP2 U A 99 9.010 7.762 6.232 1.00 37.29 O
ATOM 25 O5' U A 99 10.252 6.813 4.312 1.00 34.83 O
TER
ATOM 1 O3' A B 96 11.332 17.732 11.686 1.00 29.32 O
ATOM 2 P U B 97 10.556 16.339 11.589 1.00 30.32 P
ATOM 3 OP1 U B 97 9.144 16.730 11.830 1.00 36.00 O
ATOM 4 OP2 U B 97 11.175 15.255 12.387 1.00 27.26 O
ATOM 5 O5' U B 97 10.790 15.950 10.064 1.00 32.16 O
ATOM 6 C5' U B 97 10.242 16.761 9.040 1.00 32.78 C
ATOM 7 C4' U B 97 10.719 16.294 7.691 1.00 28.11 C
ATOM 8 O4' U B 97 12.148 16.530 7.583 1.00 26.46 O
ATOM 9 C3' U B 97 10.589 14.806 7.410 1.00 30.37 C
ATOM 10 O3' U B 97 9.272 14.398 7.076 1.00 31.63 O
ATOM 11 C2' U B 97 11.581 14.650 6.272 1.00 29.62 C
ATOM 12 O2' U B 97 11.049 15.274 5.114 1.00 30.10 O
ATOM 13 C1' U B 97 12.729 15.520 6.788 1.00 26.37 C
ATOM 14 N1 U B 97 13.670 14.697 7.582 1.00 25.35 N
ATOM 15 C2 U B 97 14.614 14.019 6.835 1.00 24.19 C
ATOM 16 O2 U B 97 14.659 14.109 5.616 1.00 25.09 O
ATOM 17 N3 U B 97 15.484 13.245 7.550 1.00 20.30 N
ATOM 18 C4 U B 97 15.498 13.083 8.922 1.00 21.00 C
ATOM 19 O4 U B 97 16.356 12.348 9.410 1.00 22.92 O
ATOM 20 C5 U B 97 14.494 13.818 9.636 1.00 22.92 C
ATOM 21 C6 U B 97 13.628 14.589 8.952 1.00 24.82 C
ATOM 22 P U B 98 8.808 12.880 7.311 1.00 38.49 P
ATOM 23 OP1 U B 98 7.425 12.834 6.768 1.00 38.70 O
ATOM 24 OP2 U B 98 9.088 12.446 8.708 1.00 36.39 O
ATOM 25 O5' U B 98 9.769 12.041 6.357 1.00 30.93 O
TER
ATOM 2 P U A 98 8.808 12.880 7.311 1.00 38.49 P
ATOM 3 OP1 U A 98 7.425 12.834 6.768 1.00 38.70 O
ATOM 4 OP2 U A 98 9.088 12.446 8.708 1.00 36.39 O
ATOM 5 O5' U A 98 9.769 12.041 6.357 1.00 30.93 O
ATOM 6 C5' U A 98 9.683 12.209 4.953 1.00 34.35 C
ATOM 7 C4' U A 98 10.657 11.297 4.262 1.00 30.97 C
ATOM 8 O4' U A 98 12.015 11.682 4.599 1.00 25.55 O
ATOM 9 C3' U A 98 10.608 9.839 4.676 1.00 30.39 C
ATOM 10 O3' U A 98 9.499 9.137 4.139 1.00 35.24 O
ATOM 11 C2' U A 98 11.968 9.340 4.201 1.00 29.75 C
ATOM 12 O2' U A 98 11.996 9.178 2.790 1.00 29.17 O
ATOM 13 C1' U A 98 12.845 10.539 4.560 1.00 27.36 C
ATOM 14 N1 U A 98 13.501 10.293 5.854 1.00 25.60 N
ATOM 15 C2 U A 98 14.706 9.638 5.822 1.00 25.88 C
ATOM 16 O2 U A 98 15.232 9.275 4.777 1.00 24.92 O
ATOM 17 N3 U A 98 15.274 9.424 7.052 1.00 24.67 N
ATOM 18 C4 U A 98 14.754 9.796 8.281 1.00 26.22 C
ATOM 19 O4 U A 98 15.376 9.539 9.316 1.00 23.88 O
ATOM 20 C5 U A 98 13.495 10.470 8.221 1.00 26.98 C
ATOM 21 C6 U A 98 12.923 10.691 7.030 1.00 29.18 C
ATOM 22 P U A 99 9.045 7.721 4.747 1.00 36.65 P
ATOM 23 OP1 U A 99 7.829 7.336 3.987 1.00 43.63 O
ATOM 24 OP2 U A 99 9.010 7.762 6.232 1.00 37.29 O
ATOM 25 O5' U A 99 10.252 6.813 4.312 1.00 34.83 O
TER
ATOM 1 O3' A B 96 11.332 17.732 11.686 1.00 29.32 O
ATOM 2 P U B 97 10.556 16.339 11.589 1.00 30.32 P
ATOM 3 OP1 U B 97 9.144 16.730 11.830 1.00 36.00 O
ATOM 4 OP2 U B 97 11.175 15.255 12.387 1.00 27.26 O
ATOM 5 O5' U B 97 10.790 15.950 10.064 1.00 32.16 O
ATOM 6 C5' U B 97 10.242 16.761 9.040 1.00 32.78 C
ATOM 7 C4' U B 97 10.719 16.294 7.691 1.00 28.11 C
ATOM 8 O4' U B 97 12.148 16.530 7.583 1.00 26.46 O
ATOM 9 C3' U B 97 10.589 14.806 7.410 1.00 30.37 C
ATOM 10 O3' U B 97 9.272 14.398 7.076 1.00 31.63 O
ATOM 11 C2' U B 97 11.581 14.650 6.272 1.00 29.62 C
ATOM 12 O2' U B 97 11.049 15.274 5.114 1.00 30.10 O
ATOM 13 C1' U B 97 12.729 15.520 6.788 1.00 26.37 C
ATOM 14 N1 U B 97 13.670 14.697 7.582 1.00 25.35 N
ATOM 15 C2 U B 97 14.614 14.019 6.835 1.00 24.19 C
ATOM 16 O2 U B 97 14.659 14.109 5.616 1.00 25.09 O
ATOM 17 N3 U B 97 15.484 13.245 7.550 1.00 20.30 N
ATOM 18 C4 U B 97 15.498 13.083 8.922 1.00 21.00 C
ATOM 19 O4 U B 97 16.356 12.348 9.410 1.00 22.92 O
ATOM 20 C5 U B 97 14.494 13.818 9.636 1.00 22.92 C
ATOM 21 C6 U B 97 13.628 14.589 8.952 1.00 24.82 C
ATOM 22 P U B 98 8.808 12.880 7.311 1.00 38.49 P
ATOM 23 OP1 U B 98 7.425 12.834 6.768 1.00 38.70 O
ATOM 24 OP2 U B 98 9.088 12.446 8.708 1.00 36.39 O
ATOM 25 O5' U B 98 9.769 12.041 6.357 1.00 30.93 O
TER
Atoms:
C4: (14.754,9.796,8.281)
N3: (15.274,9.424,7.052)
OP1: (7.425,12.834,6.768)
OP2: (9.088,12.446,8.708)
C2: (14.706,9.638,5.822)
C1': (12.845,10.539,4.560)
C3': (10.608,9.839,4.676)
O5': (9.769,12.041,6.357)
O4': (12.015,11.682,4.599)
C5': (9.683,12.209,4.953)
P: (8.808,12.880,7.311)
C4': (10.657,11.297,4.262)
C2': (11.968,9.340,4.201)
O2': (11.996,9.178,2.790)
N1: (13.501,10.293,5.854)
O4: (15.376,9.539,9.316)
O2: (15.232,9.275,4.777)
C6: (12.923,10.691,7.030)
C5: (13.495,10.470,8.221)
O3': (9.499,9.137,4.139)
N3: (15.274,9.424,7.052)
OP1: (7.425,12.834,6.768)
OP2: (9.088,12.446,8.708)
C2: (14.706,9.638,5.822)
C1': (12.845,10.539,4.560)
C3': (10.608,9.839,4.676)
O5': (9.769,12.041,6.357)
O4': (12.015,11.682,4.599)
C5': (9.683,12.209,4.953)
P: (8.808,12.880,7.311)
C4': (10.657,11.297,4.262)
C2': (11.968,9.340,4.201)
O2': (11.996,9.178,2.790)
N1: (13.501,10.293,5.854)
O4: (15.376,9.539,9.316)
O2: (15.232,9.275,4.777)
C6: (12.923,10.691,7.030)
C5: (13.495,10.470,8.221)
O3': (9.499,9.137,4.139)
C4: (15.498,13.083,8.922)
N3: (15.484,13.245,7.550)
OP1: (9.144,16.730,11.830)
OP2: (11.175,15.255,12.387)
C2: (14.614,14.019,6.835)
C1': (12.729,15.520,6.788)
C3': (10.589,14.806,7.410)
O5': (10.790,15.950,10.064)
O4': (12.148,16.530,7.583)
C5': (10.242,16.761,9.040)
P: (10.556,16.339,11.589)
C4': (10.719,16.294,7.691)
C2': (11.581,14.650,6.272)
O2': (11.049,15.274,5.114)
N1: (13.670,14.697,7.582)
O4: (16.356,12.348,9.410)
O2: (14.659,14.109,5.616)
C6: (13.628,14.589,8.952)
C5: (14.494,13.818,9.636)
O3': (9.272,14.398,7.076)
N3: (15.484,13.245,7.550)
OP1: (9.144,16.730,11.830)
OP2: (11.175,15.255,12.387)
C2: (14.614,14.019,6.835)
C1': (12.729,15.520,6.788)
C3': (10.589,14.806,7.410)
O5': (10.790,15.950,10.064)
O4': (12.148,16.530,7.583)
C5': (10.242,16.761,9.040)
P: (10.556,16.339,11.589)
C4': (10.719,16.294,7.691)
C2': (11.581,14.650,6.272)
O2': (11.049,15.274,5.114)
N1: (13.670,14.697,7.582)
O4: (16.356,12.348,9.410)
O2: (14.659,14.109,5.616)
C6: (13.628,14.589,8.952)
C5: (14.494,13.818,9.636)
O3': (9.272,14.398,7.076)
Image (generated by PyMOL):