Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0600:0599
Extra
PDB:
ATOM 1 O3' U A 599 19.172 133.710 95.271 1.00 45.41 O
ATOM 2 P U A 600 20.009 132.716 96.220 1.00 44.91 P
ATOM 3 OP1 U A 600 21.172 133.512 96.687 1.00 46.46 O
ATOM 4 OP2 U A 600 20.240 131.427 95.529 1.00 44.01 O
ATOM 5 O5' U A 600 19.052 132.460 97.469 1.00 46.49 O
ATOM 6 C5' U A 600 18.863 133.482 98.468 1.00 47.40 C
ATOM 7 C4' U A 600 17.749 133.104 99.416 1.00 48.85 C
ATOM 8 O4' U A 600 16.521 132.892 98.672 1.00 48.92 O
ATOM 9 C3' U A 600 17.918 131.809 100.191 1.00 48.66 C
ATOM 10 O3' U A 600 18.747 131.971 101.328 1.00 48.26 O
ATOM 11 C2' U A 600 16.486 131.492 100.593 1.00 48.31 C
ATOM 12 O2' U A 600 16.039 132.251 101.700 1.00 48.56 O
ATOM 13 C1' U A 600 15.731 131.914 99.333 1.00 48.47 C
ATOM 14 N1 U A 600 15.536 130.772 98.432 1.00 47.98 N
ATOM 15 C2 U A 600 14.397 130.014 98.612 1.00 48.08 C
ATOM 16 O2 U A 600 13.554 130.277 99.453 1.00 47.38 O
ATOM 17 N3 U A 600 14.282 128.937 97.773 1.00 48.88 N
ATOM 18 C4 U A 600 15.165 128.555 96.786 1.00 48.38 C
ATOM 19 O4 U A 600 14.896 127.584 96.077 1.00 48.80 O
ATOM 20 C5 U A 600 16.313 129.397 96.655 1.00 47.42 C
ATOM 21 C6 U A 600 16.455 130.451 97.459 1.00 47.31 C
ATOM 22 P C A 601 19.293 130.675 102.098 1.00 49.30 P
ATOM 23 OP1 C A 601 20.227 131.170 103.144 1.00 50.34 O
ATOM 24 OP2 C A 601 19.760 129.676 101.101 1.00 46.97 O
ATOM 25 O5' C A 601 18.005 130.093 102.828 1.00 49.94 O
TER
ATOM 1 O3' G B 598 17.617 132.509 89.445 1.00 46.12 O
ATOM 2 P U B 599 18.452 131.663 90.524 1.00 46.73 P
ATOM 3 OP1 U B 599 19.883 131.932 90.247 1.00 45.83 O
ATOM 4 OP2 U B 599 17.956 130.262 90.514 1.00 45.10 O
ATOM 5 O5' U B 599 18.044 132.324 91.915 1.00 44.32 O
ATOM 6 C5' U B 599 18.259 133.726 92.162 1.00 44.57 C
ATOM 7 C4' U B 599 17.608 134.133 93.465 1.00 45.81 C
ATOM 8 O4' U B 599 16.163 134.036 93.344 1.00 46.22 O
ATOM 9 C3' U B 599 17.957 133.272 94.672 1.00 44.83 C
ATOM 10 O3' U B 599 19.172 133.710 95.271 1.00 45.41 O
ATOM 11 C2' U B 599 16.756 133.492 95.579 1.00 44.76 C
ATOM 12 O2' U B 599 16.826 134.731 96.251 1.00 44.75 O
ATOM 13 C1' U B 599 15.615 133.543 94.557 1.00 44.49 C
ATOM 14 N1 U B 599 15.009 132.226 94.289 1.00 43.19 N
ATOM 15 C2 U B 599 13.992 131.798 95.126 1.00 43.63 C
ATOM 16 O2 U B 599 13.582 132.459 96.062 1.00 44.55 O
ATOM 17 N3 U B 599 13.476 130.560 94.827 1.00 42.68 N
ATOM 18 C4 U B 599 13.864 129.725 93.801 1.00 42.39 C
ATOM 19 O4 U B 599 13.315 128.633 93.668 1.00 42.49 O
ATOM 20 C5 U B 599 14.914 130.238 92.981 1.00 42.17 C
ATOM 21 C6 U B 599 15.438 131.438 93.245 1.00 41.58 C
ATOM 22 P U B 600 20.009 132.716 96.220 1.00 44.91 P
ATOM 23 OP1 U B 600 21.172 133.512 96.687 1.00 46.46 O
ATOM 24 OP2 U B 600 20.240 131.427 95.529 1.00 44.01 O
ATOM 25 O5' U B 600 19.052 132.460 97.469 1.00 46.49 O
TER
ATOM 2 P U A 600 20.009 132.716 96.220 1.00 44.91 P
ATOM 3 OP1 U A 600 21.172 133.512 96.687 1.00 46.46 O
ATOM 4 OP2 U A 600 20.240 131.427 95.529 1.00 44.01 O
ATOM 5 O5' U A 600 19.052 132.460 97.469 1.00 46.49 O
ATOM 6 C5' U A 600 18.863 133.482 98.468 1.00 47.40 C
ATOM 7 C4' U A 600 17.749 133.104 99.416 1.00 48.85 C
ATOM 8 O4' U A 600 16.521 132.892 98.672 1.00 48.92 O
ATOM 9 C3' U A 600 17.918 131.809 100.191 1.00 48.66 C
ATOM 10 O3' U A 600 18.747 131.971 101.328 1.00 48.26 O
ATOM 11 C2' U A 600 16.486 131.492 100.593 1.00 48.31 C
ATOM 12 O2' U A 600 16.039 132.251 101.700 1.00 48.56 O
ATOM 13 C1' U A 600 15.731 131.914 99.333 1.00 48.47 C
ATOM 14 N1 U A 600 15.536 130.772 98.432 1.00 47.98 N
ATOM 15 C2 U A 600 14.397 130.014 98.612 1.00 48.08 C
ATOM 16 O2 U A 600 13.554 130.277 99.453 1.00 47.38 O
ATOM 17 N3 U A 600 14.282 128.937 97.773 1.00 48.88 N
ATOM 18 C4 U A 600 15.165 128.555 96.786 1.00 48.38 C
ATOM 19 O4 U A 600 14.896 127.584 96.077 1.00 48.80 O
ATOM 20 C5 U A 600 16.313 129.397 96.655 1.00 47.42 C
ATOM 21 C6 U A 600 16.455 130.451 97.459 1.00 47.31 C
ATOM 22 P C A 601 19.293 130.675 102.098 1.00 49.30 P
ATOM 23 OP1 C A 601 20.227 131.170 103.144 1.00 50.34 O
ATOM 24 OP2 C A 601 19.760 129.676 101.101 1.00 46.97 O
ATOM 25 O5' C A 601 18.005 130.093 102.828 1.00 49.94 O
TER
ATOM 1 O3' G B 598 17.617 132.509 89.445 1.00 46.12 O
ATOM 2 P U B 599 18.452 131.663 90.524 1.00 46.73 P
ATOM 3 OP1 U B 599 19.883 131.932 90.247 1.00 45.83 O
ATOM 4 OP2 U B 599 17.956 130.262 90.514 1.00 45.10 O
ATOM 5 O5' U B 599 18.044 132.324 91.915 1.00 44.32 O
ATOM 6 C5' U B 599 18.259 133.726 92.162 1.00 44.57 C
ATOM 7 C4' U B 599 17.608 134.133 93.465 1.00 45.81 C
ATOM 8 O4' U B 599 16.163 134.036 93.344 1.00 46.22 O
ATOM 9 C3' U B 599 17.957 133.272 94.672 1.00 44.83 C
ATOM 10 O3' U B 599 19.172 133.710 95.271 1.00 45.41 O
ATOM 11 C2' U B 599 16.756 133.492 95.579 1.00 44.76 C
ATOM 12 O2' U B 599 16.826 134.731 96.251 1.00 44.75 O
ATOM 13 C1' U B 599 15.615 133.543 94.557 1.00 44.49 C
ATOM 14 N1 U B 599 15.009 132.226 94.289 1.00 43.19 N
ATOM 15 C2 U B 599 13.992 131.798 95.126 1.00 43.63 C
ATOM 16 O2 U B 599 13.582 132.459 96.062 1.00 44.55 O
ATOM 17 N3 U B 599 13.476 130.560 94.827 1.00 42.68 N
ATOM 18 C4 U B 599 13.864 129.725 93.801 1.00 42.39 C
ATOM 19 O4 U B 599 13.315 128.633 93.668 1.00 42.49 O
ATOM 20 C5 U B 599 14.914 130.238 92.981 1.00 42.17 C
ATOM 21 C6 U B 599 15.438 131.438 93.245 1.00 41.58 C
ATOM 22 P U B 600 20.009 132.716 96.220 1.00 44.91 P
ATOM 23 OP1 U B 600 21.172 133.512 96.687 1.00 46.46 O
ATOM 24 OP2 U B 600 20.240 131.427 95.529 1.00 44.01 O
ATOM 25 O5' U B 600 19.052 132.460 97.469 1.00 46.49 O
TER
Atoms:
C4: (15.165,128.555,96.786)
N3: (14.282,128.937,97.773)
OP1: (21.172,133.512,96.687)
OP2: (20.240,131.427,95.529)
C2: (14.397,130.014,98.612)
C1': (15.731,131.914,99.333)
C3': (17.918,131.809,100.191)
O5': (19.052,132.460,97.469)
O4': (16.521,132.892,98.672)
C5': (18.863,133.482,98.468)
P: (20.009,132.716,96.220)
C4': (17.749,133.104,99.416)
C2': (16.486,131.492,100.593)
O2': (16.039,132.251,101.700)
N1: (15.536,130.772,98.432)
O4: (14.896,127.584,96.077)
O2: (13.554,130.277,99.453)
C6: (16.455,130.451,97.459)
C5: (16.313,129.397,96.655)
O3': (18.747,131.971,101.328)
N3: (14.282,128.937,97.773)
OP1: (21.172,133.512,96.687)
OP2: (20.240,131.427,95.529)
C2: (14.397,130.014,98.612)
C1': (15.731,131.914,99.333)
C3': (17.918,131.809,100.191)
O5': (19.052,132.460,97.469)
O4': (16.521,132.892,98.672)
C5': (18.863,133.482,98.468)
P: (20.009,132.716,96.220)
C4': (17.749,133.104,99.416)
C2': (16.486,131.492,100.593)
O2': (16.039,132.251,101.700)
N1: (15.536,130.772,98.432)
O4: (14.896,127.584,96.077)
O2: (13.554,130.277,99.453)
C6: (16.455,130.451,97.459)
C5: (16.313,129.397,96.655)
O3': (18.747,131.971,101.328)
C4: (13.864,129.725,93.801)
N3: (13.476,130.560,94.827)
OP1: (19.883,131.932,90.247)
OP2: (17.956,130.262,90.514)
C2: (13.992,131.798,95.126)
C1': (15.615,133.543,94.557)
C3': (17.957,133.272,94.672)
O5': (18.044,132.324,91.915)
O4': (16.163,134.036,93.344)
C5': (18.259,133.726,92.162)
P: (18.452,131.663,90.524)
C4': (17.608,134.133,93.465)
C2': (16.756,133.492,95.579)
O2': (16.826,134.731,96.251)
N1: (15.009,132.226,94.289)
O4: (13.315,128.633,93.668)
O2: (13.582,132.459,96.062)
C6: (15.438,131.438,93.245)
C5: (14.914,130.238,92.981)
O3': (19.172,133.710,95.271)
N3: (13.476,130.560,94.827)
OP1: (19.883,131.932,90.247)
OP2: (17.956,130.262,90.514)
C2: (13.992,131.798,95.126)
C1': (15.615,133.543,94.557)
C3': (17.957,133.272,94.672)
O5': (18.044,132.324,91.915)
O4': (16.163,134.036,93.344)
C5': (18.259,133.726,92.162)
P: (18.452,131.663,90.524)
C4': (17.608,134.133,93.465)
C2': (16.756,133.492,95.579)
O2': (16.826,134.731,96.251)
N1: (15.009,132.226,94.289)
O4: (13.315,128.633,93.668)
O2: (13.582,132.459,96.062)
C6: (15.438,131.438,93.245)
C5: (14.914,130.238,92.981)
O3': (19.172,133.710,95.271)
Image (generated by PyMOL):