Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1316:A1319
Extra
PDB:
ATOM 1 O3' A A1315 38.424 122.619 78.089 1.00 36.56 O
ATOM 2 P A A1316 39.328 122.899 76.806 1.00 36.39 P
ATOM 3 OP1 A A1316 39.047 124.290 76.360 1.00 35.37 O
ATOM 4 OP2 A A1316 39.183 121.789 75.882 1.00 39.80 O
ATOM 5 O5' A A1316 40.801 122.804 77.384 1.00 37.84 O
ATOM 6 C5' A A1316 41.191 123.587 78.528 1.00 36.74 C
ATOM 7 C4' A A1316 41.889 122.718 79.561 1.00 34.54 C
ATOM 8 O4' A A1316 40.959 121.763 80.120 1.00 34.08 O
ATOM 9 C3' A A1316 43.107 121.904 79.141 1.00 32.85 C
ATOM 10 O3' A A1316 44.018 122.013 80.211 1.00 32.82 O
ATOM 11 C2' A A1316 42.573 120.479 79.152 1.00 33.07 C
ATOM 12 O2' A A1316 43.559 119.495 79.389 1.00 36.54 O
ATOM 13 C1' A A1316 41.616 120.553 80.330 1.00 31.90 C
ATOM 14 N9 A A1316 40.603 119.506 80.438 1.00 31.30 N
ATOM 15 C8 A A1316 40.330 118.465 79.597 1.00 31.87 C
ATOM 16 N7 A A1316 39.357 117.698 80.015 1.00 32.56 N
ATOM 17 C5 A A1316 38.952 118.284 81.198 1.00 31.23 C
ATOM 18 C6 A A1316 37.948 117.952 82.125 1.00 31.91 C
ATOM 19 N6 A A1316 37.151 116.890 82.008 1.00 32.46 N
ATOM 20 N1 A A1316 37.800 118.748 83.202 1.00 32.61 N
ATOM 21 C2 A A1316 38.630 119.789 83.339 1.00 32.31 C
ATOM 22 N3 A A1316 39.611 120.192 82.537 1.00 31.58 N
ATOM 23 C4 A A1316 39.714 119.390 81.474 1.00 30.55 C
ATOM 24 P A A1317 45.017 123.264 80.277 1.00 33.88 P
ATOM 25 OP1 A A1317 45.275 123.545 81.695 1.00 32.97 O
ATOM 26 OP2 A A1317 44.504 124.347 79.412 1.00 33.17 O
ATOM 27 O5' A A1317 46.336 122.692 79.601 1.00 32.18 O
TER
ATOM 1 O3' U B1318 49.585 127.104 80.830 1.00 31.52 O
ATOM 2 P C B1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 3 OP1 C B1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 4 OP2 C B1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 5 O5' C B1319 49.509 127.064 78.332 1.00 30.85 O
ATOM 6 C5' C B1319 48.558 126.045 77.950 1.00 30.59 C
ATOM 7 C4' C B1319 48.898 125.478 76.589 1.00 31.47 C
ATOM 8 O4' C B1319 48.060 124.324 76.314 1.00 31.86 O
ATOM 9 C3' C B1319 48.702 126.416 75.408 1.00 29.88 C
ATOM 10 O3' C B1319 49.877 127.217 75.231 1.00 29.79 O
ATOM 11 C2' C B1319 48.432 125.433 74.270 1.00 30.24 C
ATOM 12 O2' C B1319 49.585 124.724 73.877 1.00 29.66 O
ATOM 13 C1' C B1319 47.584 124.379 74.978 1.00 31.17 C
ATOM 14 N1 C B1319 46.148 124.673 75.064 1.00 30.81 N
ATOM 15 C2 C B1319 45.344 124.774 73.919 1.00 29.54 C
ATOM 16 O2 C B1319 45.856 124.706 72.796 1.00 31.25 O
ATOM 17 N3 C B1319 44.022 124.962 74.083 1.00 29.62 N
ATOM 18 C4 C B1319 43.507 125.065 75.316 1.00 30.85 C
ATOM 19 N4 C B1319 42.198 125.215 75.455 1.00 31.90 N
ATOM 20 C5 C B1319 44.307 125.012 76.467 1.00 31.36 C
ATOM 21 C6 C B1319 45.601 124.823 76.301 1.00 31.21 C
ATOM 22 P C B1320 49.735 128.800 75.041 1.00 28.89 P
ATOM 23 OP1 C B1320 51.054 129.434 74.978 1.00 27.75 O
ATOM 24 OP2 C B1320 48.746 129.274 76.042 1.00 29.03 O
ATOM 25 O5' C B1320 49.153 128.911 73.574 1.00 26.94 O
TER
ATOM 2 P A A1316 39.328 122.899 76.806 1.00 36.39 P
ATOM 3 OP1 A A1316 39.047 124.290 76.360 1.00 35.37 O
ATOM 4 OP2 A A1316 39.183 121.789 75.882 1.00 39.80 O
ATOM 5 O5' A A1316 40.801 122.804 77.384 1.00 37.84 O
ATOM 6 C5' A A1316 41.191 123.587 78.528 1.00 36.74 C
ATOM 7 C4' A A1316 41.889 122.718 79.561 1.00 34.54 C
ATOM 8 O4' A A1316 40.959 121.763 80.120 1.00 34.08 O
ATOM 9 C3' A A1316 43.107 121.904 79.141 1.00 32.85 C
ATOM 10 O3' A A1316 44.018 122.013 80.211 1.00 32.82 O
ATOM 11 C2' A A1316 42.573 120.479 79.152 1.00 33.07 C
ATOM 12 O2' A A1316 43.559 119.495 79.389 1.00 36.54 O
ATOM 13 C1' A A1316 41.616 120.553 80.330 1.00 31.90 C
ATOM 14 N9 A A1316 40.603 119.506 80.438 1.00 31.30 N
ATOM 15 C8 A A1316 40.330 118.465 79.597 1.00 31.87 C
ATOM 16 N7 A A1316 39.357 117.698 80.015 1.00 32.56 N
ATOM 17 C5 A A1316 38.952 118.284 81.198 1.00 31.23 C
ATOM 18 C6 A A1316 37.948 117.952 82.125 1.00 31.91 C
ATOM 19 N6 A A1316 37.151 116.890 82.008 1.00 32.46 N
ATOM 20 N1 A A1316 37.800 118.748 83.202 1.00 32.61 N
ATOM 21 C2 A A1316 38.630 119.789 83.339 1.00 32.31 C
ATOM 22 N3 A A1316 39.611 120.192 82.537 1.00 31.58 N
ATOM 23 C4 A A1316 39.714 119.390 81.474 1.00 30.55 C
ATOM 24 P A A1317 45.017 123.264 80.277 1.00 33.88 P
ATOM 25 OP1 A A1317 45.275 123.545 81.695 1.00 32.97 O
ATOM 26 OP2 A A1317 44.504 124.347 79.412 1.00 33.17 O
ATOM 27 O5' A A1317 46.336 122.692 79.601 1.00 32.18 O
TER
ATOM 1 O3' U B1318 49.585 127.104 80.830 1.00 31.52 O
ATOM 2 P C B1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 3 OP1 C B1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 4 OP2 C B1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 5 O5' C B1319 49.509 127.064 78.332 1.00 30.85 O
ATOM 6 C5' C B1319 48.558 126.045 77.950 1.00 30.59 C
ATOM 7 C4' C B1319 48.898 125.478 76.589 1.00 31.47 C
ATOM 8 O4' C B1319 48.060 124.324 76.314 1.00 31.86 O
ATOM 9 C3' C B1319 48.702 126.416 75.408 1.00 29.88 C
ATOM 10 O3' C B1319 49.877 127.217 75.231 1.00 29.79 O
ATOM 11 C2' C B1319 48.432 125.433 74.270 1.00 30.24 C
ATOM 12 O2' C B1319 49.585 124.724 73.877 1.00 29.66 O
ATOM 13 C1' C B1319 47.584 124.379 74.978 1.00 31.17 C
ATOM 14 N1 C B1319 46.148 124.673 75.064 1.00 30.81 N
ATOM 15 C2 C B1319 45.344 124.774 73.919 1.00 29.54 C
ATOM 16 O2 C B1319 45.856 124.706 72.796 1.00 31.25 O
ATOM 17 N3 C B1319 44.022 124.962 74.083 1.00 29.62 N
ATOM 18 C4 C B1319 43.507 125.065 75.316 1.00 30.85 C
ATOM 19 N4 C B1319 42.198 125.215 75.455 1.00 31.90 N
ATOM 20 C5 C B1319 44.307 125.012 76.467 1.00 31.36 C
ATOM 21 C6 C B1319 45.601 124.823 76.301 1.00 31.21 C
ATOM 22 P C B1320 49.735 128.800 75.041 1.00 28.89 P
ATOM 23 OP1 C B1320 51.054 129.434 74.978 1.00 27.75 O
ATOM 24 OP2 C B1320 48.746 129.274 76.042 1.00 29.03 O
ATOM 25 O5' C B1320 49.153 128.911 73.574 1.00 26.94 O
TER
Atoms:
OP1: (39.047,124.290,76.360)
OP2: (39.183,121.789,75.882)
C3': (43.107,121.904,79.141)
C1': (41.616,120.553,80.330)
C5': (41.191,123.587,78.528)
O4': (40.959,121.763,80.120)
C8: (40.330,118.465,79.597)
O2': (43.559,119.495,79.389)
C6: (37.948,117.952,82.125)
C5: (38.952,118.284,81.198)
C4: (39.714,119.390,81.474)
P: (39.328,122.899,76.806)
C4': (41.889,122.718,79.561)
C2': (42.573,120.479,79.152)
C2: (38.630,119.789,83.339)
N1: (37.800,118.748,83.202)
N3: (39.611,120.192,82.537)
N6: (37.151,116.890,82.008)
N7: (39.357,117.698,80.015)
N9: (40.603,119.506,80.438)
O5': (40.801,122.804,77.384)
O3': (44.018,122.013,80.211)
OP2: (39.183,121.789,75.882)
C3': (43.107,121.904,79.141)
C1': (41.616,120.553,80.330)
C5': (41.191,123.587,78.528)
O4': (40.959,121.763,80.120)
C8: (40.330,118.465,79.597)
O2': (43.559,119.495,79.389)
C6: (37.948,117.952,82.125)
C5: (38.952,118.284,81.198)
C4: (39.714,119.390,81.474)
P: (39.328,122.899,76.806)
C4': (41.889,122.718,79.561)
C2': (42.573,120.479,79.152)
C2: (38.630,119.789,83.339)
N1: (37.800,118.748,83.202)
N3: (39.611,120.192,82.537)
N6: (37.151,116.890,82.008)
N7: (39.357,117.698,80.015)
N9: (40.603,119.506,80.438)
O5': (40.801,122.804,77.384)
O3': (44.018,122.013,80.211)
C2: (45.344,124.774,73.919)
OP1: (50.036,129.230,79.532)
OP2: (47.726,128.155,79.606)
C4: (43.507,125.065,75.316)
O5': (49.509,127.064,78.332)
C3': (48.702,126.416,75.408)
C1': (47.584,124.379,74.978)
O4': (48.060,124.324,76.314)
C5': (48.558,126.045,77.950)
P: (49.187,128.008,79.566)
O2: (45.856,124.706,72.796)
C4': (48.898,125.478,76.589)
C2': (48.432,125.433,74.270)
O2': (49.585,124.724,73.877)
N1: (46.148,124.673,75.064)
N3: (44.022,124.962,74.083)
N4: (42.198,125.215,75.455)
C6: (45.601,124.823,76.301)
C5: (44.307,125.012,76.467)
O3': (49.877,127.217,75.231)
OP1: (50.036,129.230,79.532)
OP2: (47.726,128.155,79.606)
C4: (43.507,125.065,75.316)
O5': (49.509,127.064,78.332)
C3': (48.702,126.416,75.408)
C1': (47.584,124.379,74.978)
O4': (48.060,124.324,76.314)
C5': (48.558,126.045,77.950)
P: (49.187,128.008,79.566)
O2: (45.856,124.706,72.796)
C4': (48.898,125.478,76.589)
C2': (48.432,125.433,74.270)
O2': (49.585,124.724,73.877)
N1: (46.148,124.673,75.064)
N3: (44.022,124.962,74.083)
N4: (42.198,125.215,75.455)
C6: (45.601,124.823,76.301)
C5: (44.307,125.012,76.467)
O3': (49.877,127.217,75.231)
Image (generated by PyMOL):