Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01129:01128
Extra
PDB:
ATOM 1 O3' U A1128 89.324 78.204 180.374 1.00148.69 O
ATOM 2 P U A1129 90.329 78.741 181.510 1.00149.06 P
ATOM 3 OP1 U A1129 91.678 78.849 180.902 1.00149.35 O
ATOM 4 OP2 U A1129 90.136 77.902 182.724 1.00148.81 O
ATOM 5 O5' U A1129 89.799 80.209 181.846 1.00150.44 O
ATOM 6 C5' U A1129 89.713 81.230 180.824 1.00152.06 C
ATOM 7 C4' U A1129 88.810 82.361 181.280 1.00153.32 C
ATOM 8 O4' U A1129 87.516 81.810 181.644 1.00153.46 O
ATOM 9 C3' U A1129 89.251 83.141 182.514 1.00154.15 C
ATOM 10 O3' U A1129 90.162 84.190 182.165 1.00155.93 O
ATOM 11 C2' U A1129 87.928 83.701 183.026 1.00153.68 C
ATOM 12 O2' U A1129 87.506 84.823 182.279 1.00153.05 O
ATOM 13 C1' U A1129 86.972 82.541 182.732 1.00153.39 C
ATOM 14 N1 U A1129 86.755 81.615 183.858 1.00153.14 N
ATOM 15 C2 U A1129 85.599 81.771 184.616 1.00152.90 C
ATOM 16 O2 U A1129 84.771 82.647 184.404 1.00152.06 O
ATOM 17 N3 U A1129 85.451 80.860 185.636 1.00152.94 N
ATOM 18 C4 U A1129 86.317 79.835 185.975 1.00152.82 C
ATOM 19 O4 U A1129 86.029 79.081 186.907 1.00152.25 O
ATOM 20 C5 U A1129 87.488 79.747 185.156 1.00152.61 C
ATOM 21 C6 U A1129 87.664 80.615 184.154 1.00152.92 C
ATOM 22 P A A1130 91.283 84.678 183.218 1.00156.93 P
ATOM 23 OP1 A A1130 91.990 85.837 182.609 1.00156.61 O
ATOM 24 OP2 A A1130 92.065 83.483 183.636 1.00156.52 O
ATOM 25 O5' A A1130 90.462 85.216 184.478 1.00156.81 O
TER
ATOM 1 O3' C B1127 86.426 73.608 183.211 1.00143.79 O
ATOM 2 P U B1128 87.438 74.795 183.611 1.00145.29 P
ATOM 3 OP1 U B1128 88.828 74.268 183.536 1.00144.96 O
ATOM 4 OP2 U B1128 86.948 75.398 184.884 1.00144.68 O
ATOM 5 O5' U B1128 87.247 75.871 182.449 1.00145.95 O
ATOM 6 C5' U B1128 87.622 75.569 181.087 1.00146.94 C
ATOM 7 C4' U B1128 87.361 76.759 180.190 1.00147.43 C
ATOM 8 O4' U B1128 85.932 77.015 180.107 1.00147.48 O
ATOM 9 C3' U B1128 87.935 78.086 180.661 1.00148.04 C
ATOM 10 O3' U B1128 89.324 78.204 180.374 1.00148.69 O
ATOM 11 C2' U B1128 87.078 79.090 179.898 1.00147.82 C
ATOM 12 O2' U B1128 87.462 79.243 178.544 1.00147.69 O
ATOM 13 C1' U B1128 85.706 78.412 179.953 1.00147.23 C
ATOM 14 N1 U B1128 84.854 78.890 181.059 1.00146.64 N
ATOM 15 C2 U B1128 83.971 79.929 180.789 1.00146.12 C
ATOM 16 O2 U B1128 83.875 80.452 179.693 1.00145.95 O
ATOM 17 N3 U B1128 83.205 80.332 181.856 1.00145.73 N
ATOM 18 C4 U B1128 83.225 79.821 183.136 1.00145.73 C
ATOM 19 O4 U B1128 82.466 80.289 183.985 1.00145.53 O
ATOM 20 C5 U B1128 84.159 78.755 183.340 1.00145.89 C
ATOM 21 C6 U B1128 84.922 78.336 182.322 1.00146.41 C
ATOM 22 P U B1129 90.329 78.741 181.510 1.00149.06 P
ATOM 23 OP1 U B1129 91.678 78.849 180.902 1.00149.35 O
ATOM 24 OP2 U B1129 90.136 77.902 182.724 1.00148.81 O
ATOM 25 O5' U B1129 89.799 80.209 181.846 1.00150.44 O
TER
ATOM 2 P U A1129 90.329 78.741 181.510 1.00149.06 P
ATOM 3 OP1 U A1129 91.678 78.849 180.902 1.00149.35 O
ATOM 4 OP2 U A1129 90.136 77.902 182.724 1.00148.81 O
ATOM 5 O5' U A1129 89.799 80.209 181.846 1.00150.44 O
ATOM 6 C5' U A1129 89.713 81.230 180.824 1.00152.06 C
ATOM 7 C4' U A1129 88.810 82.361 181.280 1.00153.32 C
ATOM 8 O4' U A1129 87.516 81.810 181.644 1.00153.46 O
ATOM 9 C3' U A1129 89.251 83.141 182.514 1.00154.15 C
ATOM 10 O3' U A1129 90.162 84.190 182.165 1.00155.93 O
ATOM 11 C2' U A1129 87.928 83.701 183.026 1.00153.68 C
ATOM 12 O2' U A1129 87.506 84.823 182.279 1.00153.05 O
ATOM 13 C1' U A1129 86.972 82.541 182.732 1.00153.39 C
ATOM 14 N1 U A1129 86.755 81.615 183.858 1.00153.14 N
ATOM 15 C2 U A1129 85.599 81.771 184.616 1.00152.90 C
ATOM 16 O2 U A1129 84.771 82.647 184.404 1.00152.06 O
ATOM 17 N3 U A1129 85.451 80.860 185.636 1.00152.94 N
ATOM 18 C4 U A1129 86.317 79.835 185.975 1.00152.82 C
ATOM 19 O4 U A1129 86.029 79.081 186.907 1.00152.25 O
ATOM 20 C5 U A1129 87.488 79.747 185.156 1.00152.61 C
ATOM 21 C6 U A1129 87.664 80.615 184.154 1.00152.92 C
ATOM 22 P A A1130 91.283 84.678 183.218 1.00156.93 P
ATOM 23 OP1 A A1130 91.990 85.837 182.609 1.00156.61 O
ATOM 24 OP2 A A1130 92.065 83.483 183.636 1.00156.52 O
ATOM 25 O5' A A1130 90.462 85.216 184.478 1.00156.81 O
TER
ATOM 1 O3' C B1127 86.426 73.608 183.211 1.00143.79 O
ATOM 2 P U B1128 87.438 74.795 183.611 1.00145.29 P
ATOM 3 OP1 U B1128 88.828 74.268 183.536 1.00144.96 O
ATOM 4 OP2 U B1128 86.948 75.398 184.884 1.00144.68 O
ATOM 5 O5' U B1128 87.247 75.871 182.449 1.00145.95 O
ATOM 6 C5' U B1128 87.622 75.569 181.087 1.00146.94 C
ATOM 7 C4' U B1128 87.361 76.759 180.190 1.00147.43 C
ATOM 8 O4' U B1128 85.932 77.015 180.107 1.00147.48 O
ATOM 9 C3' U B1128 87.935 78.086 180.661 1.00148.04 C
ATOM 10 O3' U B1128 89.324 78.204 180.374 1.00148.69 O
ATOM 11 C2' U B1128 87.078 79.090 179.898 1.00147.82 C
ATOM 12 O2' U B1128 87.462 79.243 178.544 1.00147.69 O
ATOM 13 C1' U B1128 85.706 78.412 179.953 1.00147.23 C
ATOM 14 N1 U B1128 84.854 78.890 181.059 1.00146.64 N
ATOM 15 C2 U B1128 83.971 79.929 180.789 1.00146.12 C
ATOM 16 O2 U B1128 83.875 80.452 179.693 1.00145.95 O
ATOM 17 N3 U B1128 83.205 80.332 181.856 1.00145.73 N
ATOM 18 C4 U B1128 83.225 79.821 183.136 1.00145.73 C
ATOM 19 O4 U B1128 82.466 80.289 183.985 1.00145.53 O
ATOM 20 C5 U B1128 84.159 78.755 183.340 1.00145.89 C
ATOM 21 C6 U B1128 84.922 78.336 182.322 1.00146.41 C
ATOM 22 P U B1129 90.329 78.741 181.510 1.00149.06 P
ATOM 23 OP1 U B1129 91.678 78.849 180.902 1.00149.35 O
ATOM 24 OP2 U B1129 90.136 77.902 182.724 1.00148.81 O
ATOM 25 O5' U B1129 89.799 80.209 181.846 1.00150.44 O
TER
Atoms:
C4: (86.317,79.835,185.975)
N3: (85.451,80.860,185.636)
OP1: (91.678,78.849,180.902)
OP2: (90.136,77.902,182.724)
C2: (85.599,81.771,184.616)
C1': (86.972,82.541,182.732)
C3': (89.251,83.141,182.514)
O5': (89.799,80.209,181.846)
O4': (87.516,81.810,181.644)
C5': (89.713,81.230,180.824)
P: (90.329,78.741,181.510)
C4': (88.810,82.361,181.280)
C2': (87.928,83.701,183.026)
O2': (87.506,84.823,182.279)
N1: (86.755,81.615,183.858)
O4: (86.029,79.081,186.907)
O2: (84.771,82.647,184.404)
C6: (87.664,80.615,184.154)
C5: (87.488,79.747,185.156)
O3': (90.162,84.190,182.165)
N3: (85.451,80.860,185.636)
OP1: (91.678,78.849,180.902)
OP2: (90.136,77.902,182.724)
C2: (85.599,81.771,184.616)
C1': (86.972,82.541,182.732)
C3': (89.251,83.141,182.514)
O5': (89.799,80.209,181.846)
O4': (87.516,81.810,181.644)
C5': (89.713,81.230,180.824)
P: (90.329,78.741,181.510)
C4': (88.810,82.361,181.280)
C2': (87.928,83.701,183.026)
O2': (87.506,84.823,182.279)
N1: (86.755,81.615,183.858)
O4: (86.029,79.081,186.907)
O2: (84.771,82.647,184.404)
C6: (87.664,80.615,184.154)
C5: (87.488,79.747,185.156)
O3': (90.162,84.190,182.165)
C4: (83.225,79.821,183.136)
N3: (83.205,80.332,181.856)
OP1: (88.828,74.268,183.536)
OP2: (86.948,75.398,184.884)
C2: (83.971,79.929,180.789)
C1': (85.706,78.412,179.953)
C3': (87.935,78.086,180.661)
O5': (87.247,75.871,182.449)
O4': (85.932,77.015,180.107)
C5': (87.622,75.569,181.087)
P: (87.438,74.795,183.611)
C4': (87.361,76.759,180.190)
C2': (87.078,79.090,179.898)
O2': (87.462,79.243,178.544)
N1: (84.854,78.890,181.059)
O4: (82.466,80.289,183.985)
O2: (83.875,80.452,179.693)
C6: (84.922,78.336,182.322)
C5: (84.159,78.755,183.340)
O3': (89.324,78.204,180.374)
N3: (83.205,80.332,181.856)
OP1: (88.828,74.268,183.536)
OP2: (86.948,75.398,184.884)
C2: (83.971,79.929,180.789)
C1': (85.706,78.412,179.953)
C3': (87.935,78.086,180.661)
O5': (87.247,75.871,182.449)
O4': (85.932,77.015,180.107)
C5': (87.622,75.569,181.087)
P: (87.438,74.795,183.611)
C4': (87.361,76.759,180.190)
C2': (87.078,79.090,179.898)
O2': (87.462,79.243,178.544)
N1: (84.854,78.890,181.059)
O4: (82.466,80.289,183.985)
O2: (83.875,80.452,179.693)
C6: (84.922,78.336,182.322)
C5: (84.159,78.755,183.340)
O3': (89.324,78.204,180.374)
Image (generated by PyMOL):