Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01316:01319
Extra
PDB:
ATOM 1 O3' A A1315 38.381 122.510 77.716 1.00 30.61 O
ATOM 2 P A A1316 39.297 122.605 76.412 1.00 33.80 P
ATOM 3 OP1 A A1316 39.111 123.977 75.863 1.00 28.50 O
ATOM 4 OP2 A A1316 39.025 121.422 75.564 1.00 34.36 O
ATOM 5 O5' A A1316 40.766 122.437 77.007 1.00 34.43 O
ATOM 6 C5' A A1316 41.224 123.315 78.038 1.00 34.15 C
ATOM 7 C4' A A1316 41.873 122.543 79.167 1.00 34.32 C
ATOM 8 O4' A A1316 40.932 121.584 79.712 1.00 34.69 O
ATOM 9 C3' A A1316 43.156 121.756 78.884 1.00 32.50 C
ATOM 10 O3' A A1316 44.024 121.950 79.996 1.00 31.71 O
ATOM 11 C2' A A1316 42.685 120.308 78.954 1.00 32.92 C
ATOM 12 O2' A A1316 43.717 119.451 79.386 1.00 33.52 O
ATOM 13 C1' A A1316 41.630 120.410 80.048 1.00 33.55 C
ATOM 14 N9 A A1316 40.660 119.320 80.166 1.00 33.41 N
ATOM 15 C8 A A1316 40.441 118.238 79.349 1.00 33.55 C
ATOM 16 N7 A A1316 39.436 117.485 79.729 1.00 33.94 N
ATOM 17 C5 A A1316 38.970 118.109 80.877 1.00 34.06 C
ATOM 18 C6 A A1316 37.902 117.821 81.747 1.00 34.03 C
ATOM 19 N6 A A1316 37.062 116.801 81.580 1.00 33.09 N
ATOM 20 N1 A A1316 37.720 118.637 82.809 1.00 34.69 N
ATOM 21 C2 A A1316 38.553 119.672 82.973 1.00 34.33 C
ATOM 22 N3 A A1316 39.581 120.053 82.218 1.00 33.77 N
ATOM 23 C4 A A1316 39.733 119.223 81.172 1.00 33.39 C
ATOM 24 P A A1317 45.104 123.139 79.977 1.00 28.86 P
ATOM 25 OP1 A A1317 45.413 123.400 81.386 1.00 28.71 O
ATOM 26 OP2 A A1317 44.625 124.246 79.125 1.00 28.36 O
ATOM 27 O5' A A1317 46.380 122.478 79.302 1.00 26.57 O
TER
ATOM 1 O3' U B1318 49.570 126.890 80.458 1.00 28.40 O
ATOM 2 P C B1319 49.221 127.821 79.207 1.00 27.07 P
ATOM 3 OP1 C B1319 50.171 128.950 79.211 1.00 29.40 O
ATOM 4 OP2 C B1319 47.770 128.091 79.276 1.00 27.15 O
ATOM 5 O5' C B1319 49.523 126.900 77.942 1.00 25.59 O
ATOM 6 C5' C B1319 48.639 125.826 77.585 1.00 24.04 C
ATOM 7 C4' C B1319 48.953 125.320 76.198 1.00 24.26 C
ATOM 8 O4' C B1319 48.106 124.182 75.897 1.00 25.40 O
ATOM 9 C3' C B1319 48.706 126.315 75.079 1.00 23.52 C
ATOM 10 O3' C B1319 49.872 127.094 74.865 1.00 26.03 O
ATOM 11 C2' C B1319 48.378 125.412 73.900 1.00 22.89 C
ATOM 12 O2' C B1319 49.528 124.828 73.333 1.00 20.33 O
ATOM 13 C1' C B1319 47.574 124.307 74.590 1.00 24.39 C
ATOM 14 N1 C B1319 46.119 124.564 74.713 1.00 23.99 N
ATOM 15 C2 C B1319 45.334 124.671 73.555 1.00 24.28 C
ATOM 16 O2 C B1319 45.867 124.528 72.448 1.00 23.80 O
ATOM 17 N3 C B1319 44.016 124.919 73.678 1.00 25.94 N
ATOM 18 C4 C B1319 43.473 125.051 74.892 1.00 28.07 C
ATOM 19 N4 C B1319 42.166 125.303 74.975 1.00 29.16 N
ATOM 20 C5 C B1319 44.243 124.935 76.078 1.00 26.50 C
ATOM 21 C6 C B1319 45.545 124.698 75.946 1.00 24.00 C
ATOM 22 P C B1320 49.760 128.689 74.719 1.00 25.31 P
ATOM 23 OP1 C B1320 51.156 129.178 74.721 1.00 25.59 O
ATOM 24 OP2 C B1320 48.797 129.226 75.709 1.00 23.85 O
ATOM 25 O5' C B1320 49.155 128.880 73.263 1.00 24.46 O
TER
ATOM 2 P A A1316 39.297 122.605 76.412 1.00 33.80 P
ATOM 3 OP1 A A1316 39.111 123.977 75.863 1.00 28.50 O
ATOM 4 OP2 A A1316 39.025 121.422 75.564 1.00 34.36 O
ATOM 5 O5' A A1316 40.766 122.437 77.007 1.00 34.43 O
ATOM 6 C5' A A1316 41.224 123.315 78.038 1.00 34.15 C
ATOM 7 C4' A A1316 41.873 122.543 79.167 1.00 34.32 C
ATOM 8 O4' A A1316 40.932 121.584 79.712 1.00 34.69 O
ATOM 9 C3' A A1316 43.156 121.756 78.884 1.00 32.50 C
ATOM 10 O3' A A1316 44.024 121.950 79.996 1.00 31.71 O
ATOM 11 C2' A A1316 42.685 120.308 78.954 1.00 32.92 C
ATOM 12 O2' A A1316 43.717 119.451 79.386 1.00 33.52 O
ATOM 13 C1' A A1316 41.630 120.410 80.048 1.00 33.55 C
ATOM 14 N9 A A1316 40.660 119.320 80.166 1.00 33.41 N
ATOM 15 C8 A A1316 40.441 118.238 79.349 1.00 33.55 C
ATOM 16 N7 A A1316 39.436 117.485 79.729 1.00 33.94 N
ATOM 17 C5 A A1316 38.970 118.109 80.877 1.00 34.06 C
ATOM 18 C6 A A1316 37.902 117.821 81.747 1.00 34.03 C
ATOM 19 N6 A A1316 37.062 116.801 81.580 1.00 33.09 N
ATOM 20 N1 A A1316 37.720 118.637 82.809 1.00 34.69 N
ATOM 21 C2 A A1316 38.553 119.672 82.973 1.00 34.33 C
ATOM 22 N3 A A1316 39.581 120.053 82.218 1.00 33.77 N
ATOM 23 C4 A A1316 39.733 119.223 81.172 1.00 33.39 C
ATOM 24 P A A1317 45.104 123.139 79.977 1.00 28.86 P
ATOM 25 OP1 A A1317 45.413 123.400 81.386 1.00 28.71 O
ATOM 26 OP2 A A1317 44.625 124.246 79.125 1.00 28.36 O
ATOM 27 O5' A A1317 46.380 122.478 79.302 1.00 26.57 O
TER
ATOM 1 O3' U B1318 49.570 126.890 80.458 1.00 28.40 O
ATOM 2 P C B1319 49.221 127.821 79.207 1.00 27.07 P
ATOM 3 OP1 C B1319 50.171 128.950 79.211 1.00 29.40 O
ATOM 4 OP2 C B1319 47.770 128.091 79.276 1.00 27.15 O
ATOM 5 O5' C B1319 49.523 126.900 77.942 1.00 25.59 O
ATOM 6 C5' C B1319 48.639 125.826 77.585 1.00 24.04 C
ATOM 7 C4' C B1319 48.953 125.320 76.198 1.00 24.26 C
ATOM 8 O4' C B1319 48.106 124.182 75.897 1.00 25.40 O
ATOM 9 C3' C B1319 48.706 126.315 75.079 1.00 23.52 C
ATOM 10 O3' C B1319 49.872 127.094 74.865 1.00 26.03 O
ATOM 11 C2' C B1319 48.378 125.412 73.900 1.00 22.89 C
ATOM 12 O2' C B1319 49.528 124.828 73.333 1.00 20.33 O
ATOM 13 C1' C B1319 47.574 124.307 74.590 1.00 24.39 C
ATOM 14 N1 C B1319 46.119 124.564 74.713 1.00 23.99 N
ATOM 15 C2 C B1319 45.334 124.671 73.555 1.00 24.28 C
ATOM 16 O2 C B1319 45.867 124.528 72.448 1.00 23.80 O
ATOM 17 N3 C B1319 44.016 124.919 73.678 1.00 25.94 N
ATOM 18 C4 C B1319 43.473 125.051 74.892 1.00 28.07 C
ATOM 19 N4 C B1319 42.166 125.303 74.975 1.00 29.16 N
ATOM 20 C5 C B1319 44.243 124.935 76.078 1.00 26.50 C
ATOM 21 C6 C B1319 45.545 124.698 75.946 1.00 24.00 C
ATOM 22 P C B1320 49.760 128.689 74.719 1.00 25.31 P
ATOM 23 OP1 C B1320 51.156 129.178 74.721 1.00 25.59 O
ATOM 24 OP2 C B1320 48.797 129.226 75.709 1.00 23.85 O
ATOM 25 O5' C B1320 49.155 128.880 73.263 1.00 24.46 O
TER
Atoms:
OP1: (39.111,123.977,75.863)
OP2: (39.025,121.422,75.564)
C3': (43.156,121.756,78.884)
C1': (41.630,120.410,80.048)
C5': (41.224,123.315,78.038)
O4': (40.932,121.584,79.712)
C8: (40.441,118.238,79.349)
O2': (43.717,119.451,79.386)
C6: (37.902,117.821,81.747)
C5: (38.970,118.109,80.877)
C4: (39.733,119.223,81.172)
P: (39.297,122.605,76.412)
C4': (41.873,122.543,79.167)
C2': (42.685,120.308,78.954)
C2: (38.553,119.672,82.973)
N1: (37.720,118.637,82.809)
N3: (39.581,120.053,82.218)
N6: (37.062,116.801,81.580)
N7: (39.436,117.485,79.729)
N9: (40.660,119.320,80.166)
O5': (40.766,122.437,77.007)
O3': (44.024,121.950,79.996)
OP2: (39.025,121.422,75.564)
C3': (43.156,121.756,78.884)
C1': (41.630,120.410,80.048)
C5': (41.224,123.315,78.038)
O4': (40.932,121.584,79.712)
C8: (40.441,118.238,79.349)
O2': (43.717,119.451,79.386)
C6: (37.902,117.821,81.747)
C5: (38.970,118.109,80.877)
C4: (39.733,119.223,81.172)
P: (39.297,122.605,76.412)
C4': (41.873,122.543,79.167)
C2': (42.685,120.308,78.954)
C2: (38.553,119.672,82.973)
N1: (37.720,118.637,82.809)
N3: (39.581,120.053,82.218)
N6: (37.062,116.801,81.580)
N7: (39.436,117.485,79.729)
N9: (40.660,119.320,80.166)
O5': (40.766,122.437,77.007)
O3': (44.024,121.950,79.996)
C2: (45.334,124.671,73.555)
OP1: (50.171,128.950,79.211)
OP2: (47.770,128.091,79.276)
C4: (43.473,125.051,74.892)
O5': (49.523,126.900,77.942)
C3': (48.706,126.315,75.079)
C1': (47.574,124.307,74.590)
O4': (48.106,124.182,75.897)
C5': (48.639,125.826,77.585)
P: (49.221,127.821,79.207)
O2: (45.867,124.528,72.448)
C4': (48.953,125.320,76.198)
C2': (48.378,125.412,73.900)
O2': (49.528,124.828,73.333)
N1: (46.119,124.564,74.713)
N3: (44.016,124.919,73.678)
N4: (42.166,125.303,74.975)
C6: (45.545,124.698,75.946)
C5: (44.243,124.935,76.078)
O3': (49.872,127.094,74.865)
OP1: (50.171,128.950,79.211)
OP2: (47.770,128.091,79.276)
C4: (43.473,125.051,74.892)
O5': (49.523,126.900,77.942)
C3': (48.706,126.315,75.079)
C1': (47.574,124.307,74.590)
O4': (48.106,124.182,75.897)
C5': (48.639,125.826,77.585)
P: (49.221,127.821,79.207)
O2: (45.867,124.528,72.448)
C4': (48.953,125.320,76.198)
C2': (48.378,125.412,73.900)
O2': (49.528,124.828,73.333)
N1: (46.119,124.564,74.713)
N3: (44.016,124.919,73.678)
N4: (42.166,125.303,74.975)
C6: (45.545,124.698,75.946)
C5: (44.243,124.935,76.078)
O3': (49.872,127.094,74.865)
Image (generated by PyMOL):