Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01316:01319
Extra
PDB:
ATOM 1 O3' A A1315 38.478 122.884 78.122 1.00 40.93 O
ATOM 2 P A A1316 39.415 122.932 76.824 1.00 44.22 P
ATOM 3 OP1 A A1316 39.263 124.278 76.211 1.00 39.48 O
ATOM 4 OP2 A A1316 39.147 121.714 76.025 1.00 42.92 O
ATOM 5 O5' A A1316 40.880 122.787 77.432 1.00 44.91 O
ATOM 6 C5' A A1316 41.342 123.706 78.428 1.00 43.82 C
ATOM 7 C4' A A1316 42.045 122.981 79.560 1.00 42.21 C
ATOM 8 O4' A A1316 41.152 121.995 80.135 1.00 40.62 O
ATOM 9 C3' A A1316 43.357 122.249 79.274 1.00 39.39 C
ATOM 10 O3' A A1316 44.217 122.462 80.400 1.00 38.56 O
ATOM 11 C2' A A1316 42.925 120.786 79.283 1.00 38.61 C
ATOM 12 O2' A A1316 43.986 119.946 79.671 1.00 40.52 O
ATOM 13 C1' A A1316 41.866 120.812 80.380 1.00 38.23 C
ATOM 14 N9 A A1316 40.898 119.718 80.468 1.00 37.32 N
ATOM 15 C8 A A1316 40.653 118.663 79.624 1.00 37.13 C
ATOM 16 N7 A A1316 39.646 117.909 80.001 1.00 37.51 N
ATOM 17 C5 A A1316 39.206 118.503 81.178 1.00 37.86 C
ATOM 18 C6 A A1316 38.146 118.198 82.075 1.00 38.24 C
ATOM 19 N6 A A1316 37.280 117.192 81.911 1.00 36.79 N
ATOM 20 N1 A A1316 38.003 118.984 83.163 1.00 37.31 N
ATOM 21 C2 A A1316 38.853 120.004 83.331 1.00 38.75 C
ATOM 22 N3 A A1316 39.869 120.397 82.560 1.00 37.24 N
ATOM 23 C4 A A1316 39.987 119.599 81.488 1.00 36.73 C
ATOM 24 P A A1317 45.363 123.603 80.353 1.00 38.33 P
ATOM 25 OP1 A A1317 45.721 123.843 81.756 1.00 37.11 O
ATOM 26 OP2 A A1317 44.953 124.750 79.520 1.00 37.13 O
ATOM 27 O5' A A1317 46.586 122.877 79.635 1.00 35.65 O
TER
ATOM 1 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 2 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 3 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 4 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 5 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
ATOM 6 C5' C B1319 48.846 126.144 77.944 1.00 37.83 C
ATOM 7 C4' C B1319 49.126 125.697 76.531 1.00 38.91 C
ATOM 8 O4' C B1319 48.280 124.564 76.200 1.00 38.09 O
ATOM 9 C3' C B1319 48.847 126.742 75.459 1.00 37.72 C
ATOM 10 O3' C B1319 50.009 127.538 75.240 1.00 36.49 O
ATOM 11 C2' C B1319 48.502 125.882 74.252 1.00 37.98 C
ATOM 12 O2' C B1319 49.650 125.320 73.658 1.00 39.50 O
ATOM 13 C1' C B1319 47.725 124.742 74.911 1.00 37.13 C
ATOM 14 N1 C B1319 46.272 124.966 75.065 1.00 36.73 N
ATOM 15 C2 C B1319 45.454 125.008 73.927 1.00 37.46 C
ATOM 16 O2 C B1319 45.967 124.904 72.809 1.00 38.42 O
ATOM 17 N3 C B1319 44.126 125.165 74.080 1.00 39.01 N
ATOM 18 C4 C B1319 43.608 125.293 75.306 1.00 41.68 C
ATOM 19 N4 C B1319 42.291 125.450 75.420 1.00 45.20 N
ATOM 20 C5 C B1319 44.415 125.268 76.471 1.00 40.02 C
ATOM 21 C6 C B1319 45.727 125.110 76.308 1.00 37.36 C
ATOM 22 P C B1320 49.877 129.128 75.057 1.00 35.53 P
ATOM 23 OP1 C B1320 51.246 129.685 75.059 1.00 35.67 O
ATOM 24 OP2 C B1320 48.881 129.634 76.030 1.00 34.72 O
ATOM 25 O5' C B1320 49.314 129.286 73.581 1.00 34.85 O
TER
ATOM 2 P A A1316 39.415 122.932 76.824 1.00 44.22 P
ATOM 3 OP1 A A1316 39.263 124.278 76.211 1.00 39.48 O
ATOM 4 OP2 A A1316 39.147 121.714 76.025 1.00 42.92 O
ATOM 5 O5' A A1316 40.880 122.787 77.432 1.00 44.91 O
ATOM 6 C5' A A1316 41.342 123.706 78.428 1.00 43.82 C
ATOM 7 C4' A A1316 42.045 122.981 79.560 1.00 42.21 C
ATOM 8 O4' A A1316 41.152 121.995 80.135 1.00 40.62 O
ATOM 9 C3' A A1316 43.357 122.249 79.274 1.00 39.39 C
ATOM 10 O3' A A1316 44.217 122.462 80.400 1.00 38.56 O
ATOM 11 C2' A A1316 42.925 120.786 79.283 1.00 38.61 C
ATOM 12 O2' A A1316 43.986 119.946 79.671 1.00 40.52 O
ATOM 13 C1' A A1316 41.866 120.812 80.380 1.00 38.23 C
ATOM 14 N9 A A1316 40.898 119.718 80.468 1.00 37.32 N
ATOM 15 C8 A A1316 40.653 118.663 79.624 1.00 37.13 C
ATOM 16 N7 A A1316 39.646 117.909 80.001 1.00 37.51 N
ATOM 17 C5 A A1316 39.206 118.503 81.178 1.00 37.86 C
ATOM 18 C6 A A1316 38.146 118.198 82.075 1.00 38.24 C
ATOM 19 N6 A A1316 37.280 117.192 81.911 1.00 36.79 N
ATOM 20 N1 A A1316 38.003 118.984 83.163 1.00 37.31 N
ATOM 21 C2 A A1316 38.853 120.004 83.331 1.00 38.75 C
ATOM 22 N3 A A1316 39.869 120.397 82.560 1.00 37.24 N
ATOM 23 C4 A A1316 39.987 119.599 81.488 1.00 36.73 C
ATOM 24 P A A1317 45.363 123.603 80.353 1.00 38.33 P
ATOM 25 OP1 A A1317 45.721 123.843 81.756 1.00 37.11 O
ATOM 26 OP2 A A1317 44.953 124.750 79.520 1.00 37.13 O
ATOM 27 O5' A A1317 46.586 122.877 79.635 1.00 35.65 O
TER
ATOM 1 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 2 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 3 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 4 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 5 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
ATOM 6 C5' C B1319 48.846 126.144 77.944 1.00 37.83 C
ATOM 7 C4' C B1319 49.126 125.697 76.531 1.00 38.91 C
ATOM 8 O4' C B1319 48.280 124.564 76.200 1.00 38.09 O
ATOM 9 C3' C B1319 48.847 126.742 75.459 1.00 37.72 C
ATOM 10 O3' C B1319 50.009 127.538 75.240 1.00 36.49 O
ATOM 11 C2' C B1319 48.502 125.882 74.252 1.00 37.98 C
ATOM 12 O2' C B1319 49.650 125.320 73.658 1.00 39.50 O
ATOM 13 C1' C B1319 47.725 124.742 74.911 1.00 37.13 C
ATOM 14 N1 C B1319 46.272 124.966 75.065 1.00 36.73 N
ATOM 15 C2 C B1319 45.454 125.008 73.927 1.00 37.46 C
ATOM 16 O2 C B1319 45.967 124.904 72.809 1.00 38.42 O
ATOM 17 N3 C B1319 44.126 125.165 74.080 1.00 39.01 N
ATOM 18 C4 C B1319 43.608 125.293 75.306 1.00 41.68 C
ATOM 19 N4 C B1319 42.291 125.450 75.420 1.00 45.20 N
ATOM 20 C5 C B1319 44.415 125.268 76.471 1.00 40.02 C
ATOM 21 C6 C B1319 45.727 125.110 76.308 1.00 37.36 C
ATOM 22 P C B1320 49.877 129.128 75.057 1.00 35.53 P
ATOM 23 OP1 C B1320 51.246 129.685 75.059 1.00 35.67 O
ATOM 24 OP2 C B1320 48.881 129.634 76.030 1.00 34.72 O
ATOM 25 O5' C B1320 49.314 129.286 73.581 1.00 34.85 O
TER
Atoms:
OP1: (39.263,124.278,76.211)
OP2: (39.147,121.714,76.025)
C3': (43.357,122.249,79.274)
C1': (41.866,120.812,80.380)
C5': (41.342,123.706,78.428)
O4': (41.152,121.995,80.135)
C8: (40.653,118.663,79.624)
O2': (43.986,119.946,79.671)
C6: (38.146,118.198,82.075)
C5: (39.206,118.503,81.178)
C4: (39.987,119.599,81.488)
P: (39.415,122.932,76.824)
C4': (42.045,122.981,79.560)
C2': (42.925,120.786,79.283)
C2: (38.853,120.004,83.331)
N1: (38.003,118.984,83.163)
N3: (39.869,120.397,82.560)
N6: (37.280,117.192,81.911)
N7: (39.646,117.909,80.001)
N9: (40.898,119.718,80.468)
O5': (40.880,122.787,77.432)
O3': (44.217,122.462,80.400)
OP2: (39.147,121.714,76.025)
C3': (43.357,122.249,79.274)
C1': (41.866,120.812,80.380)
C5': (41.342,123.706,78.428)
O4': (41.152,121.995,80.135)
C8: (40.653,118.663,79.624)
O2': (43.986,119.946,79.671)
C6: (38.146,118.198,82.075)
C5: (39.206,118.503,81.178)
C4: (39.987,119.599,81.488)
P: (39.415,122.932,76.824)
C4': (42.045,122.981,79.560)
C2': (42.925,120.786,79.283)
C2: (38.853,120.004,83.331)
N1: (38.003,118.984,83.163)
N3: (39.869,120.397,82.560)
N6: (37.280,117.192,81.911)
N7: (39.646,117.909,80.001)
N9: (40.898,119.718,80.468)
O5': (40.880,122.787,77.432)
O3': (44.217,122.462,80.400)
C2: (45.454,125.008,73.927)
OP1: (50.338,129.268,79.580)
OP2: (47.917,128.489,79.558)
C4: (43.608,125.293,75.306)
O5': (49.675,127.263,78.280)
C3': (48.847,126.742,75.459)
C1': (47.725,124.742,74.911)
O4': (48.280,124.564,76.200)
C5': (48.846,126.144,77.944)
P: (49.354,128.170,79.545)
O2: (45.967,124.904,72.809)
C4': (49.126,125.697,76.531)
C2': (48.502,125.882,74.252)
O2': (49.650,125.320,73.658)
N1: (46.272,124.966,75.065)
N3: (44.126,125.165,74.080)
N4: (42.291,125.450,75.420)
C6: (45.727,125.110,76.308)
C5: (44.415,125.268,76.471)
O3': (50.009,127.538,75.240)
OP1: (50.338,129.268,79.580)
OP2: (47.917,128.489,79.558)
C4: (43.608,125.293,75.306)
O5': (49.675,127.263,78.280)
C3': (48.847,126.742,75.459)
C1': (47.725,124.742,74.911)
O4': (48.280,124.564,76.200)
C5': (48.846,126.144,77.944)
P: (49.354,128.170,79.545)
O2: (45.967,124.904,72.809)
C4': (49.126,125.697,76.531)
C2': (48.502,125.882,74.252)
O2': (49.650,125.320,73.658)
N1: (46.272,124.966,75.065)
N3: (44.126,125.165,74.080)
N4: (42.291,125.450,75.420)
C6: (45.727,125.110,76.308)
C5: (44.415,125.268,76.471)
O3': (50.009,127.538,75.240)
Image (generated by PyMOL):