Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6504:6503
Extra
PDB:
ATOM 1 O3' U A 503 260.658 31.069 309.180 1.00169.24 O
ATOM 2 P U A 504 259.363 31.999 308.957 1.00154.97 P
ATOM 3 OP1 U A 504 258.355 31.602 309.973 1.00154.80 O
ATOM 4 OP2 U A 504 259.001 31.908 307.523 1.00155.06 O
ATOM 5 O5' U A 504 259.917 33.456 309.284 1.00154.76 O
ATOM 6 C5' U A 504 260.687 34.175 308.331 1.00154.83 C
ATOM 7 C4' U A 504 262.037 34.571 308.882 1.00154.92 C
ATOM 8 O4' U A 504 263.070 33.746 308.282 1.00155.29 O
ATOM 9 C3' U A 504 262.470 36.000 308.587 1.00154.74 C
ATOM 10 O3' U A 504 262.010 36.914 309.550 1.00154.41 O
ATOM 11 C2' U A 504 263.982 35.906 308.526 1.00155.01 C
ATOM 12 O2' U A 504 264.538 35.887 309.828 1.00154.98 O
ATOM 13 C1' U A 504 264.170 34.537 307.901 1.00155.35 C
ATOM 14 N1 U A 504 264.176 34.610 306.442 1.00155.47 N
ATOM 15 C2 U A 504 265.105 35.394 305.797 1.00155.53 C
ATOM 16 O2 U A 504 265.973 36.046 306.350 1.00155.49 O
ATOM 17 N3 U A 504 264.976 35.368 304.435 1.00155.63 N
ATOM 18 C4 U A 504 264.047 34.663 303.695 1.00155.68 C
ATOM 19 O4 U A 504 264.067 34.744 302.475 1.00155.78 O
ATOM 20 C5 U A 504 263.118 33.885 304.439 1.00155.61 C
ATOM 21 C6 U A 504 263.222 33.893 305.761 1.00155.51 C
ATOM 22 P G A 505 261.801 38.444 309.150 1.00121.84 P
ATOM 23 OP1 G A 505 261.572 39.195 310.407 1.00121.55 O
ATOM 24 OP2 G A 505 260.749 38.476 308.098 1.00121.76 O
ATOM 25 O5' G A 505 263.216 38.845 308.525 1.00122.05 O
TER
ATOM 1 O3' A B 502 257.809 27.228 305.859 1.00233.07 O
ATOM 2 P U B 503 258.732 28.448 305.356 1.00169.77 P
ATOM 3 OP1 U B 503 257.834 29.406 304.658 1.00169.51 O
ATOM 4 OP2 U B 503 259.868 27.856 304.606 1.00170.13 O
ATOM 5 O5' U B 503 259.267 29.090 306.717 1.00169.62 O
ATOM 6 C5' U B 503 259.975 28.303 307.664 1.00169.80 C
ATOM 7 C4' U B 503 261.271 28.958 308.094 1.00169.84 C
ATOM 8 O4' U B 503 262.349 28.570 307.207 1.00170.16 O
ATOM 9 C3' U B 503 261.314 30.478 308.071 1.00169.56 C
ATOM 10 O3' U B 503 260.658 31.069 309.180 1.00169.24 O
ATOM 11 C2' U B 503 262.815 30.757 308.028 1.00169.75 C
ATOM 12 O2' U B 503 263.389 30.639 309.322 1.00169.75 O
ATOM 13 C1' U B 503 263.322 29.595 307.169 1.00170.13 C
ATOM 14 N1 U B 503 263.537 29.991 305.765 1.00170.21 N
ATOM 15 C2 U B 503 264.771 30.534 305.448 1.00170.33 C
ATOM 16 O2 U B 503 265.663 30.695 306.265 1.00170.37 O
ATOM 17 N3 U B 503 264.917 30.879 304.129 1.00170.41 N
ATOM 18 C4 U B 503 263.976 30.740 303.128 1.00170.37 C
ATOM 19 O4 U B 503 264.264 31.101 301.989 1.00170.45 O
ATOM 20 C5 U B 503 262.729 30.170 303.539 1.00170.24 C
ATOM 21 C6 U B 503 262.555 29.820 304.816 1.00170.17 C
ATOM 22 P U B 504 259.363 31.999 308.957 1.00154.97 P
ATOM 23 OP1 U B 504 258.355 31.602 309.973 1.00154.80 O
ATOM 24 OP2 U B 504 259.001 31.908 307.523 1.00155.06 O
ATOM 25 O5' U B 504 259.917 33.456 309.284 1.00154.76 O
TER
ATOM 2 P U A 504 259.363 31.999 308.957 1.00154.97 P
ATOM 3 OP1 U A 504 258.355 31.602 309.973 1.00154.80 O
ATOM 4 OP2 U A 504 259.001 31.908 307.523 1.00155.06 O
ATOM 5 O5' U A 504 259.917 33.456 309.284 1.00154.76 O
ATOM 6 C5' U A 504 260.687 34.175 308.331 1.00154.83 C
ATOM 7 C4' U A 504 262.037 34.571 308.882 1.00154.92 C
ATOM 8 O4' U A 504 263.070 33.746 308.282 1.00155.29 O
ATOM 9 C3' U A 504 262.470 36.000 308.587 1.00154.74 C
ATOM 10 O3' U A 504 262.010 36.914 309.550 1.00154.41 O
ATOM 11 C2' U A 504 263.982 35.906 308.526 1.00155.01 C
ATOM 12 O2' U A 504 264.538 35.887 309.828 1.00154.98 O
ATOM 13 C1' U A 504 264.170 34.537 307.901 1.00155.35 C
ATOM 14 N1 U A 504 264.176 34.610 306.442 1.00155.47 N
ATOM 15 C2 U A 504 265.105 35.394 305.797 1.00155.53 C
ATOM 16 O2 U A 504 265.973 36.046 306.350 1.00155.49 O
ATOM 17 N3 U A 504 264.976 35.368 304.435 1.00155.63 N
ATOM 18 C4 U A 504 264.047 34.663 303.695 1.00155.68 C
ATOM 19 O4 U A 504 264.067 34.744 302.475 1.00155.78 O
ATOM 20 C5 U A 504 263.118 33.885 304.439 1.00155.61 C
ATOM 21 C6 U A 504 263.222 33.893 305.761 1.00155.51 C
ATOM 22 P G A 505 261.801 38.444 309.150 1.00121.84 P
ATOM 23 OP1 G A 505 261.572 39.195 310.407 1.00121.55 O
ATOM 24 OP2 G A 505 260.749 38.476 308.098 1.00121.76 O
ATOM 25 O5' G A 505 263.216 38.845 308.525 1.00122.05 O
TER
ATOM 1 O3' A B 502 257.809 27.228 305.859 1.00233.07 O
ATOM 2 P U B 503 258.732 28.448 305.356 1.00169.77 P
ATOM 3 OP1 U B 503 257.834 29.406 304.658 1.00169.51 O
ATOM 4 OP2 U B 503 259.868 27.856 304.606 1.00170.13 O
ATOM 5 O5' U B 503 259.267 29.090 306.717 1.00169.62 O
ATOM 6 C5' U B 503 259.975 28.303 307.664 1.00169.80 C
ATOM 7 C4' U B 503 261.271 28.958 308.094 1.00169.84 C
ATOM 8 O4' U B 503 262.349 28.570 307.207 1.00170.16 O
ATOM 9 C3' U B 503 261.314 30.478 308.071 1.00169.56 C
ATOM 10 O3' U B 503 260.658 31.069 309.180 1.00169.24 O
ATOM 11 C2' U B 503 262.815 30.757 308.028 1.00169.75 C
ATOM 12 O2' U B 503 263.389 30.639 309.322 1.00169.75 O
ATOM 13 C1' U B 503 263.322 29.595 307.169 1.00170.13 C
ATOM 14 N1 U B 503 263.537 29.991 305.765 1.00170.21 N
ATOM 15 C2 U B 503 264.771 30.534 305.448 1.00170.33 C
ATOM 16 O2 U B 503 265.663 30.695 306.265 1.00170.37 O
ATOM 17 N3 U B 503 264.917 30.879 304.129 1.00170.41 N
ATOM 18 C4 U B 503 263.976 30.740 303.128 1.00170.37 C
ATOM 19 O4 U B 503 264.264 31.101 301.989 1.00170.45 O
ATOM 20 C5 U B 503 262.729 30.170 303.539 1.00170.24 C
ATOM 21 C6 U B 503 262.555 29.820 304.816 1.00170.17 C
ATOM 22 P U B 504 259.363 31.999 308.957 1.00154.97 P
ATOM 23 OP1 U B 504 258.355 31.602 309.973 1.00154.80 O
ATOM 24 OP2 U B 504 259.001 31.908 307.523 1.00155.06 O
ATOM 25 O5' U B 504 259.917 33.456 309.284 1.00154.76 O
TER
Atoms:
C4: (264.047,34.663,303.695)
N3: (264.976,35.368,304.435)
OP1: (258.355,31.602,309.973)
OP2: (259.001,31.908,307.523)
C2: (265.105,35.394,305.797)
C1': (264.170,34.537,307.901)
C3': (262.470,36.000,308.587)
O5': (259.917,33.456,309.284)
O4': (263.070,33.746,308.282)
C5': (260.687,34.175,308.331)
P: (259.363,31.999,308.957)
C4': (262.037,34.571,308.882)
C2': (263.982,35.906,308.526)
O2': (264.538,35.887,309.828)
N1: (264.176,34.610,306.442)
O4: (264.067,34.744,302.475)
O2: (265.973,36.046,306.350)
C6: (263.222,33.893,305.761)
C5: (263.118,33.885,304.439)
O3': (262.010,36.914,309.550)
N3: (264.976,35.368,304.435)
OP1: (258.355,31.602,309.973)
OP2: (259.001,31.908,307.523)
C2: (265.105,35.394,305.797)
C1': (264.170,34.537,307.901)
C3': (262.470,36.000,308.587)
O5': (259.917,33.456,309.284)
O4': (263.070,33.746,308.282)
C5': (260.687,34.175,308.331)
P: (259.363,31.999,308.957)
C4': (262.037,34.571,308.882)
C2': (263.982,35.906,308.526)
O2': (264.538,35.887,309.828)
N1: (264.176,34.610,306.442)
O4: (264.067,34.744,302.475)
O2: (265.973,36.046,306.350)
C6: (263.222,33.893,305.761)
C5: (263.118,33.885,304.439)
O3': (262.010,36.914,309.550)
C4: (263.976,30.740,303.128)
N3: (264.917,30.879,304.129)
OP1: (257.834,29.406,304.658)
OP2: (259.868,27.856,304.606)
C2: (264.771,30.534,305.448)
C1': (263.322,29.595,307.169)
C3': (261.314,30.478,308.071)
O5': (259.267,29.090,306.717)
O4': (262.349,28.570,307.207)
C5': (259.975,28.303,307.664)
P: (258.732,28.448,305.356)
C4': (261.271,28.958,308.094)
C2': (262.815,30.757,308.028)
O2': (263.389,30.639,309.322)
N1: (263.537,29.991,305.765)
O4: (264.264,31.101,301.989)
O2: (265.663,30.695,306.265)
C6: (262.555,29.820,304.816)
C5: (262.729,30.170,303.539)
O3': (260.658,31.069,309.180)
N3: (264.917,30.879,304.129)
OP1: (257.834,29.406,304.658)
OP2: (259.868,27.856,304.606)
C2: (264.771,30.534,305.448)
C1': (263.322,29.595,307.169)
C3': (261.314,30.478,308.071)
O5': (259.267,29.090,306.717)
O4': (262.349,28.570,307.207)
C5': (259.975,28.303,307.664)
P: (258.732,28.448,305.356)
C4': (261.271,28.958,308.094)
C2': (262.815,30.757,308.028)
O2': (263.389,30.639,309.322)
N1: (263.537,29.991,305.765)
O4: (264.264,31.101,301.989)
O2: (265.663,30.695,306.265)
C6: (262.555,29.820,304.816)
C5: (262.729,30.170,303.539)
O3': (260.658,31.069,309.180)
Image (generated by PyMOL):