ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A841:A842

Extra

PDB:
ATOM 1 O3' A A 840 -111.200 -74.028 29.978 1.00 72.97 O
ATOM 2 P A A 841 -111.692 -73.071 28.789 1.00 73.49 P
ATOM 3 OP1 A A 841 -112.749 -72.201 29.356 1.00 69.41 O
ATOM 4 OP2 A A 841 -111.963 -73.856 27.554 1.00 72.71 O
ATOM 5 O5' A A 841 -110.375 -72.207 28.555 1.00 73.12 O
ATOM 6 C5' A A 841 -110.493 -70.887 28.109 1.00 79.33 C
ATOM 7 C4' A A 841 -109.096 -70.403 27.856 1.00 62.97 C
ATOM 8 O4' A A 841 -108.212 -71.538 28.014 1.00 60.54 O
ATOM 9 C3' A A 841 -108.875 -69.945 26.431 1.00 66.54 C
ATOM 10 O3' A A 841 -109.311 -68.602 26.285 1.00 65.54 O
ATOM 11 C2' A A 841 -107.372 -70.129 26.318 1.00 66.56 C
ATOM 12 O2' A A 841 -106.690 -69.082 26.974 1.00 84.96 O
ATOM 13 C1' A A 841 -107.159 -71.440 27.078 1.00 63.60 C
ATOM 14 N9 A A 841 -107.163 -72.650 26.257 1.00 63.60 N
ATOM 15 C8 A A 841 -108.122 -73.619 26.222 1.00 74.70 C
ATOM 16 N7 A A 841 -107.866 -74.601 25.387 1.00 72.71 N
ATOM 17 C5 A A 841 -106.653 -74.257 24.836 1.00 62.23 C
ATOM 18 C6 A A 841 -105.841 -74.884 23.879 1.00 66.98 C
ATOM 19 N6 A A 841 -106.151 -76.035 23.288 1.00 68.49 N
ATOM 20 N1 A A 841 -104.691 -74.274 23.546 1.00 79.40 N
ATOM 21 C2 A A 841 -104.390 -73.111 24.136 1.00 70.55 C
ATOM 22 N3 A A 841 -105.075 -72.426 25.051 1.00 60.32 N
ATOM 23 C4 A A 841 -106.208 -73.062 25.362 1.00 60.41 C
ATOM 24 P U A 842 -110.813 -68.428 25.766 1.00 54.42 P
ATOM 25 OP1 U A 842 -111.158 -69.634 24.966 1.00 64.93 O
ATOM 26 OP2 U A 842 -110.982 -67.085 25.158 1.00 52.55 O
ATOM 27 O5' U A 842 -111.636 -68.511 27.140 1.00 56.84 O
TER

ATOM 1 O3' A B 841 -109.311 -68.602 26.285 1.00 65.54 O
ATOM 2 P U B 842 -110.813 -68.428 25.766 1.00 54.42 P
ATOM 3 OP1 U B 842 -111.158 -69.634 24.966 1.00 64.93 O
ATOM 4 OP2 U B 842 -110.982 -67.085 25.158 1.00 52.55 O
ATOM 5 O5' U B 842 -111.636 -68.511 27.140 1.00 56.84 O
ATOM 6 C5' U B 842 -111.828 -67.378 27.958 1.00 63.11 C
ATOM 7 C4' U B 842 -113.208 -67.446 28.574 1.00 63.59 C
ATOM 8 O4' U B 842 -113.283 -68.670 29.334 1.00 55.68 O
ATOM 9 C3' U B 842 -113.526 -66.318 29.540 1.00 61.07 C
ATOM 10 O3' U B 842 -114.253 -65.313 28.843 1.00 65.47 O
ATOM 11 C2' U B 842 -114.416 -67.014 30.549 1.00 57.78 C
ATOM 12 O2' U B 842 -115.720 -67.151 30.019 1.00 59.34 O
ATOM 13 C1' U B 842 -113.761 -68.389 30.632 1.00 61.92 C
ATOM 14 N1 U B 842 -112.630 -68.551 31.595 1.00 52.80 N
ATOM 15 C2 U B 842 -112.841 -68.380 32.945 1.00 50.51 C
ATOM 16 O2 U B 842 -113.913 -68.076 33.413 1.00 60.47 O
ATOM 17 N3 U B 842 -111.756 -68.564 33.753 1.00 44.69 N
ATOM 18 C4 U B 842 -110.489 -68.904 33.345 1.00 45.47 C
ATOM 19 O4 U B 842 -109.603 -69.033 34.180 1.00 43.13 O
ATOM 20 C5 U B 842 -110.345 -69.076 31.921 1.00 58.22 C
ATOM 21 C6 U B 842 -111.395 -68.903 31.112 1.00 58.83 C
ATOM 22 P G B 843 -114.038 -63.786 29.265 1.00 55.50 P
ATOM 23 OP1 G B 843 -114.834 -62.941 28.342 1.00 64.70 O
ATOM 24 OP2 G B 843 -112.577 -63.553 29.345 1.00 63.72 O
ATOM 25 O5' G B 843 -114.621 -63.765 30.780 1.00 41.86 O
TER

Atoms:
OP1: (-112.749,-72.201,29.356)
OP2: (-111.963,-73.856,27.554)
C3': (-108.875,-69.945,26.431)
C1': (-107.159,-71.440,27.078)
C5': (-110.493,-70.887,28.109)
O4': (-108.212,-71.538,28.014)
C8: (-108.122,-73.619,26.222)
O2': (-106.690,-69.082,26.974)
C6: (-105.841,-74.884,23.879)
C5: (-106.653,-74.257,24.836)
C4: (-106.208,-73.062,25.362)
P: (-111.692,-73.071,28.789)
C4': (-109.096,-70.403,27.856)
C2': (-107.372,-70.129,26.318)
C2: (-104.390,-73.111,24.136)
N1: (-104.691,-74.274,23.546)
N3: (-105.075,-72.426,25.051)
N6: (-106.151,-76.035,23.288)
N7: (-107.866,-74.601,25.387)
N9: (-107.163,-72.650,26.257)
O5': (-110.375,-72.207,28.555)
O3': (-109.311,-68.602,26.285)
C4: (-110.489,-68.904,33.345)
N3: (-111.756,-68.564,33.753)
OP1: (-111.158,-69.634,24.966)
OP2: (-110.982,-67.085,25.158)
C2: (-112.841,-68.380,32.945)
C1': (-113.761,-68.389,30.632)
C3': (-113.526,-66.318,29.540)
O5': (-111.636,-68.511,27.140)
O4': (-113.283,-68.670,29.334)
C5': (-111.828,-67.378,27.958)
P: (-110.813,-68.428,25.766)
C4': (-113.208,-67.446,28.574)
C2': (-114.416,-67.014,30.549)
O2': (-115.720,-67.151,30.019)
N1: (-112.630,-68.551,31.595)
O4: (-109.603,-69.033,34.180)
O2: (-113.913,-68.076,33.413)
C6: (-111.395,-68.903,31.112)
C5: (-110.345,-69.076,31.921)
O3': (-114.253,-65.313,28.843)
Image (generated by PyMOL):
PyMOL image
show in jmol