Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1539:A1540
Extra
PDB:
ATOM 1 O3' A A1538 14.747 -35.597 -1.673 1.00 5.36 O
ATOM 2 P G A1539 15.266 -34.680 -0.489 1.00 1.87 P
ATOM 3 OP1 G A1539 15.641 -33.385 -1.093 1.00 1.87 O
ATOM 4 OP2 G A1539 16.280 -35.451 0.240 1.00 1.87 O
ATOM 5 O5' G A1539 13.971 -34.507 0.395 1.00 1.87 O
ATOM 6 C5' G A1539 12.760 -34.112 -0.209 1.00 1.87 C
ATOM 7 C4' G A1539 11.583 -34.769 0.437 1.00 1.87 C
ATOM 8 O4' G A1539 11.714 -36.206 0.371 1.00 1.87 O
ATOM 9 C3' G A1539 11.397 -34.511 1.914 1.00 1.87 C
ATOM 10 O3' G A1539 10.866 -33.245 2.183 1.00 1.87 O
ATOM 11 C2' G A1539 10.452 -35.615 2.292 1.00 1.87 C
ATOM 12 O2' G A1539 9.138 -35.282 1.888 1.00 1.87 O
ATOM 13 C1' G A1539 10.977 -36.771 1.431 1.00 1.87 C
ATOM 14 N9 G A1539 11.853 -37.648 2.215 1.00 2.02 N
ATOM 15 C8 G A1539 13.207 -37.618 2.325 1.00 2.02 C
ATOM 16 N7 G A1539 13.667 -38.501 3.168 1.00 2.02 N
ATOM 17 C5 G A1539 12.541 -39.119 3.636 1.00 2.02 C
ATOM 18 C6 G A1539 12.422 -40.140 4.565 1.00 2.02 C
ATOM 19 O6 G A1539 13.342 -40.697 5.152 1.00 2.02 O
ATOM 20 N1 G A1539 11.103 -40.496 4.784 1.00 2.02 N
ATOM 21 C2 G A1539 10.026 -39.932 4.178 1.00 2.02 C
ATOM 22 N2 G A1539 8.817 -40.404 4.519 1.00 2.02 N
ATOM 23 N3 G A1539 10.141 -38.962 3.308 1.00 2.02 N
ATOM 24 C4 G A1539 11.415 -38.609 3.083 1.00 2.02 C
ATOM 25 P C A1540 11.748 -32.130 2.927 1.00 1.25 P
ATOM 26 OP1 C A1540 12.967 -32.792 3.500 1.00 1.25 O
ATOM 27 OP2 C A1540 10.825 -31.388 3.841 1.00 1.25 O
ATOM 28 O5' C A1540 12.166 -31.217 1.720 1.00 1.25 O
TER
ATOM 1 O3' G B1539 10.866 -33.245 2.183 1.00 1.87 O
ATOM 2 P C B1540 11.748 -32.130 2.927 1.00 1.25 P
ATOM 3 OP1 C B1540 12.967 -32.792 3.500 1.00 1.25 O
ATOM 4 OP2 C B1540 10.825 -31.388 3.841 1.00 1.25 O
ATOM 5 O5' C B1540 12.166 -31.217 1.720 1.00 1.25 O
ATOM 6 C5' C B1540 11.320 -31.089 0.622 1.00 1.25 C
ATOM 7 C4' C B1540 11.628 -29.849 -0.140 1.00 1.25 C
ATOM 8 O4' C B1540 11.983 -30.206 -1.503 1.00 1.25 O
ATOM 9 C3' C B1540 10.465 -28.887 -0.291 1.00 1.25 C
ATOM 10 O3' C B1540 10.400 -27.935 0.708 1.00 1.25 O
ATOM 11 C2' C B1540 10.706 -28.280 -1.643 1.00 1.25 C
ATOM 12 O2' C B1540 11.798 -27.358 -1.580 1.00 1.25 O
ATOM 13 C1' C B1540 11.155 -29.514 -2.387 1.00 1.25 C
ATOM 14 N1 C B1540 10.027 -30.399 -2.675 1.00 1.43 N
ATOM 15 C2 C B1540 9.565 -30.372 -3.947 1.00 1.43 C
ATOM 16 O2 C B1540 10.176 -29.547 -4.647 1.00 1.43 O
ATOM 17 N3 C B1540 8.531 -31.216 -4.291 1.00 1.43 N
ATOM 18 C4 C B1540 8.003 -32.049 -3.365 1.00 1.43 C
ATOM 19 N4 C B1540 7.002 -32.860 -3.690 1.00 1.43 N
ATOM 20 C5 C B1540 8.482 -32.083 -2.033 1.00 1.43 C
ATOM 21 C6 C B1540 9.486 -31.254 -1.745 1.00 1.43 C
ATOM 22 P A B1541 9.359 -26.764 0.529 1.00 5.66 P
ATOM 23 OP1 A B1541 9.413 -25.926 1.760 1.00 5.66 O
ATOM 24 OP2 A B1541 8.073 -27.387 0.147 1.00 5.66 O
ATOM 25 O5' A B1541 9.927 -25.961 -0.705 1.00 5.66 O
TER
ATOM 2 P G A1539 15.266 -34.680 -0.489 1.00 1.87 P
ATOM 3 OP1 G A1539 15.641 -33.385 -1.093 1.00 1.87 O
ATOM 4 OP2 G A1539 16.280 -35.451 0.240 1.00 1.87 O
ATOM 5 O5' G A1539 13.971 -34.507 0.395 1.00 1.87 O
ATOM 6 C5' G A1539 12.760 -34.112 -0.209 1.00 1.87 C
ATOM 7 C4' G A1539 11.583 -34.769 0.437 1.00 1.87 C
ATOM 8 O4' G A1539 11.714 -36.206 0.371 1.00 1.87 O
ATOM 9 C3' G A1539 11.397 -34.511 1.914 1.00 1.87 C
ATOM 10 O3' G A1539 10.866 -33.245 2.183 1.00 1.87 O
ATOM 11 C2' G A1539 10.452 -35.615 2.292 1.00 1.87 C
ATOM 12 O2' G A1539 9.138 -35.282 1.888 1.00 1.87 O
ATOM 13 C1' G A1539 10.977 -36.771 1.431 1.00 1.87 C
ATOM 14 N9 G A1539 11.853 -37.648 2.215 1.00 2.02 N
ATOM 15 C8 G A1539 13.207 -37.618 2.325 1.00 2.02 C
ATOM 16 N7 G A1539 13.667 -38.501 3.168 1.00 2.02 N
ATOM 17 C5 G A1539 12.541 -39.119 3.636 1.00 2.02 C
ATOM 18 C6 G A1539 12.422 -40.140 4.565 1.00 2.02 C
ATOM 19 O6 G A1539 13.342 -40.697 5.152 1.00 2.02 O
ATOM 20 N1 G A1539 11.103 -40.496 4.784 1.00 2.02 N
ATOM 21 C2 G A1539 10.026 -39.932 4.178 1.00 2.02 C
ATOM 22 N2 G A1539 8.817 -40.404 4.519 1.00 2.02 N
ATOM 23 N3 G A1539 10.141 -38.962 3.308 1.00 2.02 N
ATOM 24 C4 G A1539 11.415 -38.609 3.083 1.00 2.02 C
ATOM 25 P C A1540 11.748 -32.130 2.927 1.00 1.25 P
ATOM 26 OP1 C A1540 12.967 -32.792 3.500 1.00 1.25 O
ATOM 27 OP2 C A1540 10.825 -31.388 3.841 1.00 1.25 O
ATOM 28 O5' C A1540 12.166 -31.217 1.720 1.00 1.25 O
TER
ATOM 1 O3' G B1539 10.866 -33.245 2.183 1.00 1.87 O
ATOM 2 P C B1540 11.748 -32.130 2.927 1.00 1.25 P
ATOM 3 OP1 C B1540 12.967 -32.792 3.500 1.00 1.25 O
ATOM 4 OP2 C B1540 10.825 -31.388 3.841 1.00 1.25 O
ATOM 5 O5' C B1540 12.166 -31.217 1.720 1.00 1.25 O
ATOM 6 C5' C B1540 11.320 -31.089 0.622 1.00 1.25 C
ATOM 7 C4' C B1540 11.628 -29.849 -0.140 1.00 1.25 C
ATOM 8 O4' C B1540 11.983 -30.206 -1.503 1.00 1.25 O
ATOM 9 C3' C B1540 10.465 -28.887 -0.291 1.00 1.25 C
ATOM 10 O3' C B1540 10.400 -27.935 0.708 1.00 1.25 O
ATOM 11 C2' C B1540 10.706 -28.280 -1.643 1.00 1.25 C
ATOM 12 O2' C B1540 11.798 -27.358 -1.580 1.00 1.25 O
ATOM 13 C1' C B1540 11.155 -29.514 -2.387 1.00 1.25 C
ATOM 14 N1 C B1540 10.027 -30.399 -2.675 1.00 1.43 N
ATOM 15 C2 C B1540 9.565 -30.372 -3.947 1.00 1.43 C
ATOM 16 O2 C B1540 10.176 -29.547 -4.647 1.00 1.43 O
ATOM 17 N3 C B1540 8.531 -31.216 -4.291 1.00 1.43 N
ATOM 18 C4 C B1540 8.003 -32.049 -3.365 1.00 1.43 C
ATOM 19 N4 C B1540 7.002 -32.860 -3.690 1.00 1.43 N
ATOM 20 C5 C B1540 8.482 -32.083 -2.033 1.00 1.43 C
ATOM 21 C6 C B1540 9.486 -31.254 -1.745 1.00 1.43 C
ATOM 22 P A B1541 9.359 -26.764 0.529 1.00 5.66 P
ATOM 23 OP1 A B1541 9.413 -25.926 1.760 1.00 5.66 O
ATOM 24 OP2 A B1541 8.073 -27.387 0.147 1.00 5.66 O
ATOM 25 O5' A B1541 9.927 -25.961 -0.705 1.00 5.66 O
TER
Atoms:
OP1: (15.641,-33.385,-1.093)
OP2: (16.280,-35.451,0.240)
C3': (11.397,-34.511,1.914)
C1': (10.977,-36.771,1.431)
C5': (12.760,-34.112,-0.209)
O6: (13.342,-40.697,5.152)
O4': (11.714,-36.206,0.371)
C8: (13.207,-37.618,2.325)
C2: (10.026,-39.932,4.178)
C6: (12.422,-40.140,4.565)
C5: (12.541,-39.119,3.636)
C4: (11.415,-38.609,3.083)
P: (15.266,-34.680,-0.489)
C4': (11.583,-34.769,0.437)
C2': (10.452,-35.615,2.292)
O2': (9.138,-35.282,1.888)
N1: (11.103,-40.496,4.784)
N2: (8.817,-40.404,4.519)
N3: (10.141,-38.962,3.308)
N7: (13.667,-38.501,3.168)
N9: (11.853,-37.648,2.215)
O5': (13.971,-34.507,0.395)
O3': (10.866,-33.245,2.183)
OP2: (16.280,-35.451,0.240)
C3': (11.397,-34.511,1.914)
C1': (10.977,-36.771,1.431)
C5': (12.760,-34.112,-0.209)
O6: (13.342,-40.697,5.152)
O4': (11.714,-36.206,0.371)
C8: (13.207,-37.618,2.325)
C2: (10.026,-39.932,4.178)
C6: (12.422,-40.140,4.565)
C5: (12.541,-39.119,3.636)
C4: (11.415,-38.609,3.083)
P: (15.266,-34.680,-0.489)
C4': (11.583,-34.769,0.437)
C2': (10.452,-35.615,2.292)
O2': (9.138,-35.282,1.888)
N1: (11.103,-40.496,4.784)
N2: (8.817,-40.404,4.519)
N3: (10.141,-38.962,3.308)
N7: (13.667,-38.501,3.168)
N9: (11.853,-37.648,2.215)
O5': (13.971,-34.507,0.395)
O3': (10.866,-33.245,2.183)
C2: (9.565,-30.372,-3.947)
OP1: (12.967,-32.792,3.500)
OP2: (10.825,-31.388,3.841)
C4: (8.003,-32.049,-3.365)
O5': (12.166,-31.217,1.720)
C3': (10.465,-28.887,-0.291)
C1': (11.155,-29.514,-2.387)
O4': (11.983,-30.206,-1.503)
C5': (11.320,-31.089,0.622)
P: (11.748,-32.130,2.927)
O2: (10.176,-29.547,-4.647)
C4': (11.628,-29.849,-0.140)
C2': (10.706,-28.280,-1.643)
O2': (11.798,-27.358,-1.580)
N1: (10.027,-30.399,-2.675)
N3: (8.531,-31.216,-4.291)
N4: (7.002,-32.860,-3.690)
C6: (9.486,-31.254,-1.745)
C5: (8.482,-32.083,-2.033)
O3': (10.400,-27.935,0.708)
OP1: (12.967,-32.792,3.500)
OP2: (10.825,-31.388,3.841)
C4: (8.003,-32.049,-3.365)
O5': (12.166,-31.217,1.720)
C3': (10.465,-28.887,-0.291)
C1': (11.155,-29.514,-2.387)
O4': (11.983,-30.206,-1.503)
C5': (11.320,-31.089,0.622)
P: (11.748,-32.130,2.927)
O2: (10.176,-29.547,-4.647)
C4': (11.628,-29.849,-0.140)
C2': (10.706,-28.280,-1.643)
O2': (11.798,-27.358,-1.580)
N1: (10.027,-30.399,-2.675)
N3: (8.531,-31.216,-4.291)
N4: (7.002,-32.860,-3.690)
C6: (9.486,-31.254,-1.745)
C5: (8.482,-32.083,-2.033)
O3': (10.400,-27.935,0.708)
Image (generated by PyMOL):