Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B55:B54
Extra
PDB:
ATOM 1 O3' U A 54 -26.774 47.276 83.316 1.00 44.79 O
ATOM 2 P U A 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 3 OP1 U A 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 4 OP2 U A 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 5 O5' U A 55 -27.876 46.775 85.552 1.00 38.49 O
ATOM 6 C5' U A 55 -28.355 45.500 85.227 1.00 39.38 C
ATOM 7 C4' U A 55 -28.120 44.543 86.388 1.00 46.74 C
ATOM 8 O4' U A 55 -26.697 44.304 86.496 1.00 47.81 O
ATOM 9 C3' U A 55 -28.477 45.001 87.792 1.00 48.48 C
ATOM 10 O3' U A 55 -29.872 44.893 88.085 1.00 45.33 O
ATOM 11 C2' U A 55 -27.649 44.048 88.654 1.00 38.75 C
ATOM 12 O2' U A 55 -28.179 42.726 88.685 1.00 38.00 O
ATOM 13 C1' U A 55 -26.344 43.983 87.832 1.00 43.73 C
ATOM 14 N1 U A 55 -25.306 44.940 88.255 1.00 33.17 N
ATOM 15 C2 U A 55 -24.403 44.518 89.190 1.00 37.14 C
ATOM 16 O2 U A 55 -24.404 43.366 89.617 1.00 35.61 O
ATOM 17 N3 U A 55 -23.485 45.476 89.586 1.00 29.57 N
ATOM 18 C4 U A 55 -23.379 46.762 89.115 1.00 36.94 C
ATOM 19 O4 U A 55 -22.530 47.521 89.597 1.00 40.99 O
ATOM 20 C5 U A 55 -24.345 47.116 88.111 1.00 44.36 C
ATOM 21 C6 U A 55 -25.253 46.219 87.731 1.00 32.42 C
ATOM 22 P C A 56 -30.555 46.055 88.946 1.00 49.08 P
ATOM 23 OP1 C A 56 -31.990 45.727 88.887 1.00 63.38 O
ATOM 24 OP2 C A 56 -30.099 47.456 88.638 1.00 47.08 O
ATOM 25 O5' C A 56 -30.030 45.839 90.433 1.00 47.14 O
TER
ATOM 1 O3' G B 53 -22.126 51.171 83.299 1.00 57.10 O
ATOM 2 P U B 54 -23.465 50.861 84.118 1.00 45.11 P
ATOM 3 OP1 U B 54 -24.517 51.682 83.410 1.00 59.20 O
ATOM 4 OP2 U B 54 -23.277 50.994 85.534 1.00 38.49 O
ATOM 5 O5' U B 54 -23.788 49.338 83.814 1.00 39.16 O
ATOM 6 C5' U B 54 -24.122 48.933 82.506 1.00 32.31 C
ATOM 7 C4' U B 54 -24.465 47.468 82.510 1.00 39.57 C
ATOM 8 O4' U B 54 -23.268 46.675 82.732 1.00 40.31 O
ATOM 9 C3' U B 54 -25.392 47.029 83.636 1.00 43.23 C
ATOM 10 O3' U B 54 -26.774 47.276 83.316 1.00 44.79 O
ATOM 11 C2' U B 54 -25.099 45.531 83.730 1.00 40.88 C
ATOM 12 O2' U B 54 -25.691 44.852 82.659 1.00 41.00 O
ATOM 13 C1' U B 54 -23.580 45.492 83.456 1.00 43.27 C
ATOM 14 N1 U B 54 -22.782 45.508 84.690 1.00 31.39 N
ATOM 15 C2 U B 54 -22.506 44.327 85.251 1.00 33.03 C
ATOM 16 O2 U B 54 -22.908 43.282 84.796 1.00 35.32 O
ATOM 17 N3 U B 54 -21.711 44.388 86.376 1.00 34.04 N
ATOM 18 C4 U B 54 -21.213 45.515 86.964 1.00 32.53 C
ATOM 19 O4 U B 54 -20.584 45.400 88.008 1.00 38.39 O
ATOM 20 C5 U B 54 -21.564 46.733 86.323 1.00 37.17 C
ATOM 21 C6 U B 54 -22.320 46.695 85.229 1.00 31.34 C
ATOM 22 P U B 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 23 OP1 U B 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 24 OP2 U B 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 25 O5' U B 55 -27.876 46.775 85.552 1.00 38.49 O
TER
ATOM 2 P U A 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 3 OP1 U A 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 4 OP2 U A 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 5 O5' U A 55 -27.876 46.775 85.552 1.00 38.49 O
ATOM 6 C5' U A 55 -28.355 45.500 85.227 1.00 39.38 C
ATOM 7 C4' U A 55 -28.120 44.543 86.388 1.00 46.74 C
ATOM 8 O4' U A 55 -26.697 44.304 86.496 1.00 47.81 O
ATOM 9 C3' U A 55 -28.477 45.001 87.792 1.00 48.48 C
ATOM 10 O3' U A 55 -29.872 44.893 88.085 1.00 45.33 O
ATOM 11 C2' U A 55 -27.649 44.048 88.654 1.00 38.75 C
ATOM 12 O2' U A 55 -28.179 42.726 88.685 1.00 38.00 O
ATOM 13 C1' U A 55 -26.344 43.983 87.832 1.00 43.73 C
ATOM 14 N1 U A 55 -25.306 44.940 88.255 1.00 33.17 N
ATOM 15 C2 U A 55 -24.403 44.518 89.190 1.00 37.14 C
ATOM 16 O2 U A 55 -24.404 43.366 89.617 1.00 35.61 O
ATOM 17 N3 U A 55 -23.485 45.476 89.586 1.00 29.57 N
ATOM 18 C4 U A 55 -23.379 46.762 89.115 1.00 36.94 C
ATOM 19 O4 U A 55 -22.530 47.521 89.597 1.00 40.99 O
ATOM 20 C5 U A 55 -24.345 47.116 88.111 1.00 44.36 C
ATOM 21 C6 U A 55 -25.253 46.219 87.731 1.00 32.42 C
ATOM 22 P C A 56 -30.555 46.055 88.946 1.00 49.08 P
ATOM 23 OP1 C A 56 -31.990 45.727 88.887 1.00 63.38 O
ATOM 24 OP2 C A 56 -30.099 47.456 88.638 1.00 47.08 O
ATOM 25 O5' C A 56 -30.030 45.839 90.433 1.00 47.14 O
TER
ATOM 1 O3' G B 53 -22.126 51.171 83.299 1.00 57.10 O
ATOM 2 P U B 54 -23.465 50.861 84.118 1.00 45.11 P
ATOM 3 OP1 U B 54 -24.517 51.682 83.410 1.00 59.20 O
ATOM 4 OP2 U B 54 -23.277 50.994 85.534 1.00 38.49 O
ATOM 5 O5' U B 54 -23.788 49.338 83.814 1.00 39.16 O
ATOM 6 C5' U B 54 -24.122 48.933 82.506 1.00 32.31 C
ATOM 7 C4' U B 54 -24.465 47.468 82.510 1.00 39.57 C
ATOM 8 O4' U B 54 -23.268 46.675 82.732 1.00 40.31 O
ATOM 9 C3' U B 54 -25.392 47.029 83.636 1.00 43.23 C
ATOM 10 O3' U B 54 -26.774 47.276 83.316 1.00 44.79 O
ATOM 11 C2' U B 54 -25.099 45.531 83.730 1.00 40.88 C
ATOM 12 O2' U B 54 -25.691 44.852 82.659 1.00 41.00 O
ATOM 13 C1' U B 54 -23.580 45.492 83.456 1.00 43.27 C
ATOM 14 N1 U B 54 -22.782 45.508 84.690 1.00 31.39 N
ATOM 15 C2 U B 54 -22.506 44.327 85.251 1.00 33.03 C
ATOM 16 O2 U B 54 -22.908 43.282 84.796 1.00 35.32 O
ATOM 17 N3 U B 54 -21.711 44.388 86.376 1.00 34.04 N
ATOM 18 C4 U B 54 -21.213 45.515 86.964 1.00 32.53 C
ATOM 19 O4 U B 54 -20.584 45.400 88.008 1.00 38.39 O
ATOM 20 C5 U B 54 -21.564 46.733 86.323 1.00 37.17 C
ATOM 21 C6 U B 54 -22.320 46.695 85.229 1.00 31.34 C
ATOM 22 P U B 55 -27.742 47.902 84.435 1.00 42.51 P
ATOM 23 OP1 U B 55 -29.060 47.968 83.751 1.00 57.32 O
ATOM 24 OP2 U B 55 -27.210 49.115 85.079 1.00 41.33 O
ATOM 25 O5' U B 55 -27.876 46.775 85.552 1.00 38.49 O
TER
Atoms:
C4: (-23.379,46.762,89.115)
N3: (-23.485,45.476,89.586)
OP1: (-29.060,47.968,83.751)
OP2: (-27.210,49.115,85.079)
C2: (-24.403,44.518,89.190)
C1': (-26.344,43.983,87.832)
C3': (-28.477,45.001,87.792)
O5': (-27.876,46.775,85.552)
O4': (-26.697,44.304,86.496)
C5': (-28.355,45.500,85.227)
P: (-27.742,47.902,84.435)
C4': (-28.120,44.543,86.388)
C2': (-27.649,44.048,88.654)
O2': (-28.179,42.726,88.685)
N1: (-25.306,44.940,88.255)
O4: (-22.530,47.521,89.597)
O2: (-24.404,43.366,89.617)
C6: (-25.253,46.219,87.731)
C5: (-24.345,47.116,88.111)
O3': (-29.872,44.893,88.085)
N3: (-23.485,45.476,89.586)
OP1: (-29.060,47.968,83.751)
OP2: (-27.210,49.115,85.079)
C2: (-24.403,44.518,89.190)
C1': (-26.344,43.983,87.832)
C3': (-28.477,45.001,87.792)
O5': (-27.876,46.775,85.552)
O4': (-26.697,44.304,86.496)
C5': (-28.355,45.500,85.227)
P: (-27.742,47.902,84.435)
C4': (-28.120,44.543,86.388)
C2': (-27.649,44.048,88.654)
O2': (-28.179,42.726,88.685)
N1: (-25.306,44.940,88.255)
O4: (-22.530,47.521,89.597)
O2: (-24.404,43.366,89.617)
C6: (-25.253,46.219,87.731)
C5: (-24.345,47.116,88.111)
O3': (-29.872,44.893,88.085)
C4: (-21.213,45.515,86.964)
N3: (-21.711,44.388,86.376)
OP1: (-24.517,51.682,83.410)
OP2: (-23.277,50.994,85.534)
C2: (-22.506,44.327,85.251)
C1': (-23.580,45.492,83.456)
C3': (-25.392,47.029,83.636)
O5': (-23.788,49.338,83.814)
O4': (-23.268,46.675,82.732)
C5': (-24.122,48.933,82.506)
P: (-23.465,50.861,84.118)
C4': (-24.465,47.468,82.510)
C2': (-25.099,45.531,83.730)
O2': (-25.691,44.852,82.659)
N1: (-22.782,45.508,84.690)
O4: (-20.584,45.400,88.008)
O2: (-22.908,43.282,84.796)
C6: (-22.320,46.695,85.229)
C5: (-21.564,46.733,86.323)
O3': (-26.774,47.276,83.316)
N3: (-21.711,44.388,86.376)
OP1: (-24.517,51.682,83.410)
OP2: (-23.277,50.994,85.534)
C2: (-22.506,44.327,85.251)
C1': (-23.580,45.492,83.456)
C3': (-25.392,47.029,83.636)
O5': (-23.788,49.338,83.814)
O4': (-23.268,46.675,82.732)
C5': (-24.122,48.933,82.506)
P: (-23.465,50.861,84.118)
C4': (-24.465,47.468,82.510)
C2': (-25.099,45.531,83.730)
O2': (-25.691,44.852,82.659)
N1: (-22.782,45.508,84.690)
O4: (-20.584,45.400,88.008)
O2: (-22.908,43.282,84.796)
C6: (-22.320,46.695,85.229)
C5: (-21.564,46.733,86.323)
O3': (-26.774,47.276,83.316)
Image (generated by PyMOL):