Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:I10:I9
Extra
PDB:
ATOM 1 O3' U A 9 -38.531 0.168 -15.424 1.00 40.89 O
ATOM 2 P U A 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 3 OP1 U A 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 4 OP2 U A 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 5 O5' U A 10 -39.584 -2.109 -15.669 1.00 38.99 O
ATOM 6 C5' U A 10 -40.404 -2.016 -14.508 1.00 38.59 C
ATOM 7 C4' U A 10 -41.783 -2.549 -14.807 1.00 46.29 C
ATOM 8 O4' U A 10 -42.413 -1.715 -15.816 1.00 52.50 O
ATOM 9 C3' U A 10 -41.805 -3.941 -15.413 1.00 47.08 C
ATOM 10 O3' U A 10 -41.771 -4.933 -14.401 1.00 45.66 O
ATOM 11 C2' U A 10 -43.135 -3.953 -16.151 1.00 44.11 C
ATOM 12 O2' U A 10 -44.227 -4.199 -15.291 1.00 44.31 O
ATOM 13 C1' U A 10 -43.196 -2.521 -16.683 1.00 46.20 C
ATOM 14 N1 U A 10 -42.655 -2.399 -18.043 1.00 43.72 N
ATOM 15 C2 U A 10 -43.445 -2.834 -19.088 1.00 44.55 C
ATOM 16 O2 U A 10 -44.558 -3.300 -18.922 1.00 49.04 O
ATOM 17 N3 U A 10 -42.884 -2.703 -20.334 1.00 40.00 N
ATOM 18 C4 U A 10 -41.639 -2.187 -20.634 1.00 36.69 C
ATOM 19 O4 U A 10 -41.280 -2.114 -21.812 1.00 23.05 O
ATOM 20 C5 U A 10 -40.885 -1.756 -19.498 1.00 41.56 C
ATOM 21 C6 U A 10 -41.406 -1.874 -18.272 1.00 44.86 C
ATOM 22 P U A 11 -41.359 -6.434 -14.780 1.00 51.55 P
ATOM 23 OP1 U A 11 -41.582 -7.275 -13.576 1.00 48.00 O
ATOM 24 OP2 U A 11 -40.016 -6.405 -15.418 1.00 43.95 O
ATOM 25 O5' U A 11 -42.418 -6.842 -15.896 1.00 47.43 O
TER
ATOM 1 O3' A B 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 2 P U B 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 3 OP1 U B 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 4 OP2 U B 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 5 O5' U B 9 -37.161 2.428 -18.079 1.00 22.46 O
ATOM 6 C5' U B 9 -37.381 2.876 -16.748 1.00 15.93 C
ATOM 7 C4' U B 9 -38.746 2.444 -16.266 1.00 32.17 C
ATOM 8 O4' U B 9 -39.783 3.127 -17.026 1.00 38.25 O
ATOM 9 C3' U B 9 -39.092 0.978 -16.444 1.00 31.42 C
ATOM 10 O3' U B 9 -38.531 0.168 -15.424 1.00 40.89 O
ATOM 11 C2' U B 9 -40.610 1.014 -16.358 1.00 33.44 C
ATOM 12 O2' U B 9 -41.071 1.171 -15.032 1.00 27.88 O
ATOM 13 C1' U B 9 -40.914 2.277 -17.164 1.00 36.38 C
ATOM 14 N1 U B 9 -41.076 1.961 -18.589 1.00 43.51 N
ATOM 15 C2 U B 9 -42.295 1.455 -19.008 1.00 34.78 C
ATOM 16 O2 U B 9 -43.246 1.299 -18.256 1.00 36.77 O
ATOM 17 N3 U B 9 -42.358 1.139 -20.342 1.00 25.37 N
ATOM 18 C4 U B 9 -41.351 1.280 -21.280 1.00 35.73 C
ATOM 19 O4 U B 9 -41.540 0.899 -22.437 1.00 37.49 O
ATOM 20 C5 U B 9 -40.135 1.830 -20.772 1.00 39.60 C
ATOM 21 C6 U B 9 -40.041 2.145 -19.477 1.00 48.38 C
ATOM 22 P U B 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 23 OP1 U B 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 24 OP2 U B 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 25 O5' U B 10 -39.584 -2.109 -15.669 1.00 38.99 O
TER
ATOM 2 P U A 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 3 OP1 U A 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 4 OP2 U A 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 5 O5' U A 10 -39.584 -2.109 -15.669 1.00 38.99 O
ATOM 6 C5' U A 10 -40.404 -2.016 -14.508 1.00 38.59 C
ATOM 7 C4' U A 10 -41.783 -2.549 -14.807 1.00 46.29 C
ATOM 8 O4' U A 10 -42.413 -1.715 -15.816 1.00 52.50 O
ATOM 9 C3' U A 10 -41.805 -3.941 -15.413 1.00 47.08 C
ATOM 10 O3' U A 10 -41.771 -4.933 -14.401 1.00 45.66 O
ATOM 11 C2' U A 10 -43.135 -3.953 -16.151 1.00 44.11 C
ATOM 12 O2' U A 10 -44.227 -4.199 -15.291 1.00 44.31 O
ATOM 13 C1' U A 10 -43.196 -2.521 -16.683 1.00 46.20 C
ATOM 14 N1 U A 10 -42.655 -2.399 -18.043 1.00 43.72 N
ATOM 15 C2 U A 10 -43.445 -2.834 -19.088 1.00 44.55 C
ATOM 16 O2 U A 10 -44.558 -3.300 -18.922 1.00 49.04 O
ATOM 17 N3 U A 10 -42.884 -2.703 -20.334 1.00 40.00 N
ATOM 18 C4 U A 10 -41.639 -2.187 -20.634 1.00 36.69 C
ATOM 19 O4 U A 10 -41.280 -2.114 -21.812 1.00 23.05 O
ATOM 20 C5 U A 10 -40.885 -1.756 -19.498 1.00 41.56 C
ATOM 21 C6 U A 10 -41.406 -1.874 -18.272 1.00 44.86 C
ATOM 22 P U A 11 -41.359 -6.434 -14.780 1.00 51.55 P
ATOM 23 OP1 U A 11 -41.582 -7.275 -13.576 1.00 48.00 O
ATOM 24 OP2 U A 11 -40.016 -6.405 -15.418 1.00 43.95 O
ATOM 25 O5' U A 11 -42.418 -6.842 -15.896 1.00 47.43 O
TER
ATOM 1 O3' A B 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 2 P U B 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 3 OP1 U B 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 4 OP2 U B 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 5 O5' U B 9 -37.161 2.428 -18.079 1.00 22.46 O
ATOM 6 C5' U B 9 -37.381 2.876 -16.748 1.00 15.93 C
ATOM 7 C4' U B 9 -38.746 2.444 -16.266 1.00 32.17 C
ATOM 8 O4' U B 9 -39.783 3.127 -17.026 1.00 38.25 O
ATOM 9 C3' U B 9 -39.092 0.978 -16.444 1.00 31.42 C
ATOM 10 O3' U B 9 -38.531 0.168 -15.424 1.00 40.89 O
ATOM 11 C2' U B 9 -40.610 1.014 -16.358 1.00 33.44 C
ATOM 12 O2' U B 9 -41.071 1.171 -15.032 1.00 27.88 O
ATOM 13 C1' U B 9 -40.914 2.277 -17.164 1.00 36.38 C
ATOM 14 N1 U B 9 -41.076 1.961 -18.589 1.00 43.51 N
ATOM 15 C2 U B 9 -42.295 1.455 -19.008 1.00 34.78 C
ATOM 16 O2 U B 9 -43.246 1.299 -18.256 1.00 36.77 O
ATOM 17 N3 U B 9 -42.358 1.139 -20.342 1.00 25.37 N
ATOM 18 C4 U B 9 -41.351 1.280 -21.280 1.00 35.73 C
ATOM 19 O4 U B 9 -41.540 0.899 -22.437 1.00 37.49 O
ATOM 20 C5 U B 9 -40.135 1.830 -20.772 1.00 39.60 C
ATOM 21 C6 U B 9 -40.041 2.145 -19.477 1.00 48.38 C
ATOM 22 P U B 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 23 OP1 U B 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 24 OP2 U B 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 25 O5' U B 10 -39.584 -2.109 -15.669 1.00 38.99 O
TER
Atoms:
C4: (-41.639,-2.187,-20.634)
N3: (-42.884,-2.703,-20.334)
OP1: (-37.309,-1.883,-14.658)
OP2: (-37.707,-1.429,-17.150)
C2: (-43.445,-2.834,-19.088)
C1': (-43.196,-2.521,-16.683)
C3': (-41.805,-3.941,-15.413)
O5': (-39.584,-2.109,-15.669)
O4': (-42.413,-1.715,-15.816)
C5': (-40.404,-2.016,-14.508)
P: (-38.177,-1.366,-15.743)
C4': (-41.783,-2.549,-14.807)
C2': (-43.135,-3.953,-16.151)
O2': (-44.227,-4.199,-15.291)
N1: (-42.655,-2.399,-18.043)
O4: (-41.280,-2.114,-21.812)
O2: (-44.558,-3.300,-18.922)
C6: (-41.406,-1.874,-18.272)
C5: (-40.885,-1.756,-19.498)
O3': (-41.771,-4.933,-14.401)
N3: (-42.884,-2.703,-20.334)
OP1: (-37.309,-1.883,-14.658)
OP2: (-37.707,-1.429,-17.150)
C2: (-43.445,-2.834,-19.088)
C1': (-43.196,-2.521,-16.683)
C3': (-41.805,-3.941,-15.413)
O5': (-39.584,-2.109,-15.669)
O4': (-42.413,-1.715,-15.816)
C5': (-40.404,-2.016,-14.508)
P: (-38.177,-1.366,-15.743)
C4': (-41.783,-2.549,-14.807)
C2': (-43.135,-3.953,-16.151)
O2': (-44.227,-4.199,-15.291)
N1: (-42.655,-2.399,-18.043)
O4: (-41.280,-2.114,-21.812)
O2: (-44.558,-3.300,-18.922)
C6: (-41.406,-1.874,-18.272)
C5: (-40.885,-1.756,-19.498)
O3': (-41.771,-4.933,-14.401)
C4: (-41.351,1.280,-21.280)
N3: (-42.358,1.139,-20.342)
OP1: (-34.657,2.611,-17.991)
OP2: (-35.884,2.176,-20.202)
C2: (-42.295,1.455,-19.008)
C1': (-40.914,2.277,-17.164)
C3': (-39.092,0.978,-16.444)
O5': (-37.161,2.428,-18.079)
O4': (-39.783,3.127,-17.026)
C5': (-37.381,2.876,-16.748)
P: (-35.835,2.833,-18.869)
C4': (-38.746,2.444,-16.266)
C2': (-40.610,1.014,-16.358)
O2': (-41.071,1.171,-15.032)
N1: (-41.076,1.961,-18.589)
O4: (-41.540,0.899,-22.437)
O2: (-43.246,1.299,-18.256)
C6: (-40.041,2.145,-19.477)
C5: (-40.135,1.830,-20.772)
O3': (-38.531,0.168,-15.424)
N3: (-42.358,1.139,-20.342)
OP1: (-34.657,2.611,-17.991)
OP2: (-35.884,2.176,-20.202)
C2: (-42.295,1.455,-19.008)
C1': (-40.914,2.277,-17.164)
C3': (-39.092,0.978,-16.444)
O5': (-37.161,2.428,-18.079)
O4': (-39.783,3.127,-17.026)
C5': (-37.381,2.876,-16.748)
P: (-35.835,2.833,-18.869)
C4': (-38.746,2.444,-16.266)
C2': (-40.610,1.014,-16.358)
O2': (-41.071,1.171,-15.032)
N1: (-41.076,1.961,-18.589)
O4: (-41.540,0.899,-22.437)
O2: (-43.246,1.299,-18.256)
C6: (-40.041,2.145,-19.477)
C5: (-40.135,1.830,-20.772)
O3': (-38.531,0.168,-15.424)
Image (generated by PyMOL):