ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A754:A755

Extra

PDB:
ATOM 1 O3' G A 753 55.470 -60.947 -0.713 1.00 39.64 O
ATOM 2 P A A 754 56.562 -62.129 -0.866 1.00 41.93 P
ATOM 3 OP1 A A 754 55.959 -63.350 -1.463 1.00 39.50 O
ATOM 4 OP2 A A 754 57.231 -62.217 0.454 1.00 41.91 O
ATOM 5 O5' A A 754 57.603 -61.515 -1.906 1.00 49.02 O
ATOM 6 C5' A A 754 57.151 -61.062 -3.185 1.00 49.32 C
ATOM 7 C4' A A 754 58.300 -60.524 -4.001 1.00 52.76 C
ATOM 8 O4' A A 754 58.601 -59.173 -3.631 1.00 46.50 O
ATOM 9 C3' A A 754 59.611 -61.294 -3.899 1.00 56.71 C
ATOM 10 O3' A A 754 59.482 -62.325 -4.875 1.00 52.79 O
ATOM 11 C2' A A 754 60.672 -60.243 -4.247 1.00 52.90 C
ATOM 12 O2' A A 754 61.104 -60.234 -5.593 1.00 55.10 O
ATOM 13 C1' A A 754 59.949 -58.926 -3.931 1.00 49.67 C
ATOM 14 N9 A A 754 60.518 -58.192 -2.827 1.00 45.85 N
ATOM 15 C8 A A 754 60.497 -58.503 -1.492 1.00 54.31 C
ATOM 16 N7 A A 754 61.169 -57.660 -0.750 1.00 56.78 N
ATOM 17 C5 A A 754 61.651 -56.729 -1.660 1.00 49.29 C
ATOM 18 C6 A A 754 62.472 -55.610 -1.516 1.00 52.87 C
ATOM 19 N6 A A 754 63.005 -55.243 -0.338 1.00 53.91 N
ATOM 20 N1 A A 754 62.748 -54.877 -2.626 1.00 50.94 N
ATOM 21 C2 A A 754 62.235 -55.279 -3.797 1.00 46.00 C
ATOM 22 N3 A A 754 61.474 -56.333 -4.059 1.00 42.92 N
ATOM 23 C4 A A 754 61.222 -57.028 -2.936 1.00 42.43 C
ATOM 24 P U A 755 60.665 -63.363 -5.127 1.00 49.38 P
ATOM 25 OP1 U A 755 60.964 -64.071 -3.838 1.00 44.36 O
ATOM 26 OP2 U A 755 61.734 -62.609 -5.838 1.00 51.08 O
ATOM 27 O5' U A 755 60.031 -64.374 -6.190 1.00 48.59 O
TER

ATOM 1 O3' A B 754 59.482 -62.325 -4.875 1.00 52.79 O
ATOM 2 P U B 755 60.665 -63.363 -5.127 1.00 49.38 P
ATOM 3 OP1 U B 755 60.964 -64.071 -3.838 1.00 44.36 O
ATOM 4 OP2 U B 755 61.734 -62.609 -5.838 1.00 51.08 O
ATOM 5 O5' U B 755 60.031 -64.374 -6.190 1.00 48.59 O
ATOM 6 C5' U B 755 59.213 -63.909 -7.280 1.00 47.60 C
ATOM 7 C4' U B 755 58.613 -65.092 -8.023 1.00 54.35 C
ATOM 8 O4' U B 755 59.700 -66.019 -8.238 1.00 59.44 O
ATOM 9 C3' U B 755 57.526 -65.915 -7.319 1.00 51.45 C
ATOM 10 O3' U B 755 56.206 -65.479 -7.634 1.00 51.02 O
ATOM 11 C2' U B 755 57.725 -67.321 -7.870 1.00 48.61 C
ATOM 12 O2' U B 755 57.040 -67.573 -9.080 1.00 48.53 O
ATOM 13 C1' U B 755 59.234 -67.346 -8.100 1.00 54.58 C
ATOM 14 N1 U B 755 59.964 -67.974 -6.994 1.00 53.29 N
ATOM 15 C2 U B 755 59.768 -69.320 -6.814 1.00 50.49 C
ATOM 16 O2 U B 755 58.957 -69.954 -7.470 1.00 43.71 O
ATOM 17 N3 U B 755 60.547 -69.895 -5.838 1.00 51.46 N
ATOM 18 C4 U B 755 61.470 -69.259 -5.025 1.00 55.69 C
ATOM 19 O4 U B 755 62.195 -69.935 -4.287 1.00 53.50 O
ATOM 20 C5 U B 755 61.566 -67.844 -5.231 1.00 53.43 C
ATOM 21 C6 U B 755 60.833 -67.263 -6.184 1.00 49.71 C
ATOM 22 P G B 756 54.974 -65.914 -6.704 1.00 53.31 P
ATOM 23 OP1 G B 756 55.500 -66.667 -5.546 1.00 46.38 O
ATOM 24 OP2 G B 756 53.929 -66.531 -7.542 1.00 53.70 O
ATOM 25 O5' G B 756 54.386 -64.524 -6.206 1.00 45.92 O
TER

Atoms:
OP1: (55.959,-63.350,-1.463)
OP2: (57.231,-62.217,0.454)
C3': (59.611,-61.294,-3.899)
C1': (59.949,-58.926,-3.931)
C5': (57.151,-61.062,-3.185)
O4': (58.601,-59.173,-3.631)
C8: (60.497,-58.503,-1.492)
O2': (61.104,-60.234,-5.593)
C6: (62.472,-55.610,-1.516)
C5: (61.651,-56.729,-1.660)
C4: (61.222,-57.028,-2.936)
P: (56.562,-62.129,-0.866)
C4': (58.300,-60.524,-4.001)
C2': (60.672,-60.243,-4.247)
C2: (62.235,-55.279,-3.797)
N1: (62.748,-54.877,-2.626)
N3: (61.474,-56.333,-4.059)
N6: (63.005,-55.243,-0.338)
N7: (61.169,-57.660,-0.750)
N9: (60.518,-58.192,-2.827)
O5': (57.603,-61.515,-1.906)
O3': (59.482,-62.325,-4.875)
C4: (61.470,-69.259,-5.025)
N3: (60.547,-69.895,-5.838)
OP1: (60.964,-64.071,-3.838)
OP2: (61.734,-62.609,-5.838)
C2: (59.768,-69.320,-6.814)
C1': (59.234,-67.346,-8.100)
C3': (57.526,-65.915,-7.319)
O5': (60.031,-64.374,-6.190)
O4': (59.700,-66.019,-8.238)
C5': (59.213,-63.909,-7.280)
P: (60.665,-63.363,-5.127)
C4': (58.613,-65.092,-8.023)
C2': (57.725,-67.321,-7.870)
O2': (57.040,-67.573,-9.080)
N1: (59.964,-67.974,-6.994)
O4: (62.195,-69.935,-4.287)
O2: (58.957,-69.954,-7.470)
C6: (60.833,-67.263,-6.184)
C5: (61.566,-67.844,-5.231)
O3': (56.206,-65.479,-7.634)
Image (generated by PyMOL):
PyMOL image
show in jmol