Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1122:A1123
Extra
PDB:
ATOM 1 O3' G A1121 -88.530 -71.140 -23.111 1.00 0.01 O
ATOM 2 P A A1122 -88.226 -72.684 -22.852 1.00 0.01 P
ATOM 3 OP1 A A1122 -88.461 -73.392 -24.123 1.00 0.01 O
ATOM 4 OP2 A A1122 -89.000 -73.102 -21.650 1.00 0.01 O
ATOM 5 O5' A A1122 -86.685 -72.678 -22.534 1.00 0.01 O
ATOM 6 C5' A A1122 -86.164 -72.007 -21.406 1.00 0.01 C
ATOM 7 C4' A A1122 -85.338 -70.842 -21.831 1.00 0.01 C
ATOM 8 O4' A A1122 -86.199 -69.724 -21.999 1.00 0.01 O
ATOM 9 C3' A A1122 -84.274 -70.352 -20.860 1.00 0.01 C
ATOM 10 O3' A A1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 11 C2' A A1122 -84.096 -68.911 -21.286 1.00 0.01 C
ATOM 12 O2' A A1122 -83.166 -68.838 -22.350 1.00 0.01 O
ATOM 13 C1' A A1122 -85.480 -68.548 -21.827 1.00 0.01 C
ATOM 14 N9 A A1122 -86.245 -67.675 -20.944 1.00 0.01 N
ATOM 15 C8 A A1122 -86.782 -67.939 -19.751 1.00 0.01 C
ATOM 16 N7 A A1122 -87.453 -66.932 -19.268 1.00 0.01 N
ATOM 17 C5 A A1122 -87.384 -65.959 -20.226 1.00 0.01 C
ATOM 18 C6 A A1122 -87.887 -64.654 -20.311 1.00 0.01 C
ATOM 19 N6 A A1122 -88.600 -64.034 -19.395 1.00 0.01 N
ATOM 20 N1 A A1122 -87.632 -63.969 -21.419 1.00 0.01 N
ATOM 21 C2 A A1122 -86.893 -64.558 -22.354 1.00 0.01 C
ATOM 22 N3 A A1122 -86.357 -65.769 -22.379 1.00 0.01 N
ATOM 23 C4 A A1122 -86.651 -66.427 -21.272 1.00 0.01 C
ATOM 24 P U A1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 25 OP1 U A1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 26 OP2 U A1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 27 O5' U A1123 -80.769 -71.796 -20.192 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 2 P U B1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 3 OP1 U B1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 4 OP2 U B1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 5 O5' U B1123 -80.769 -71.796 -20.192 1.00 0.01 O
ATOM 6 C5' U B1123 -80.639 -72.326 -21.500 1.00 0.01 C
ATOM 7 C4' U B1123 -79.673 -73.469 -21.540 1.00 0.01 C
ATOM 8 O4' U B1123 -78.946 -73.522 -20.286 1.00 0.01 O
ATOM 9 C3' U B1123 -80.308 -74.840 -21.716 1.00 0.01 C
ATOM 10 O3' U B1123 -79.452 -75.641 -22.503 1.00 0.01 O
ATOM 11 C2' U B1123 -80.322 -75.366 -20.293 1.00 0.01 C
ATOM 12 O2' U B1123 -80.403 -76.758 -20.163 1.00 0.01 O
ATOM 13 C1' U B1123 -79.004 -74.834 -19.788 1.00 0.01 C
ATOM 14 N1 U B1123 -78.900 -74.808 -18.319 1.00 0.01 N
ATOM 15 C2 U B1123 -77.898 -75.469 -17.627 1.00 0.01 C
ATOM 16 O2 U B1123 -76.979 -76.088 -18.102 1.00 0.01 O
ATOM 17 N3 U B1123 -77.977 -75.368 -16.288 1.00 0.01 N
ATOM 18 C4 U B1123 -78.934 -74.725 -15.577 1.00 0.01 C
ATOM 19 O4 U B1123 -78.899 -74.728 -14.366 1.00 0.01 O
ATOM 20 C5 U B1123 -79.929 -74.088 -16.325 1.00 0.01 C
ATOM 21 C6 U B1123 -79.881 -74.156 -17.641 1.00 0.01 C
ATOM 22 P G B1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 23 OP1 G B1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 24 OP2 G B1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 25 O5' G B1124 -80.621 -77.265 -23.975 1.00 0.01 O
TER
ATOM 2 P A A1122 -88.226 -72.684 -22.852 1.00 0.01 P
ATOM 3 OP1 A A1122 -88.461 -73.392 -24.123 1.00 0.01 O
ATOM 4 OP2 A A1122 -89.000 -73.102 -21.650 1.00 0.01 O
ATOM 5 O5' A A1122 -86.685 -72.678 -22.534 1.00 0.01 O
ATOM 6 C5' A A1122 -86.164 -72.007 -21.406 1.00 0.01 C
ATOM 7 C4' A A1122 -85.338 -70.842 -21.831 1.00 0.01 C
ATOM 8 O4' A A1122 -86.199 -69.724 -21.999 1.00 0.01 O
ATOM 9 C3' A A1122 -84.274 -70.352 -20.860 1.00 0.01 C
ATOM 10 O3' A A1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 11 C2' A A1122 -84.096 -68.911 -21.286 1.00 0.01 C
ATOM 12 O2' A A1122 -83.166 -68.838 -22.350 1.00 0.01 O
ATOM 13 C1' A A1122 -85.480 -68.548 -21.827 1.00 0.01 C
ATOM 14 N9 A A1122 -86.245 -67.675 -20.944 1.00 0.01 N
ATOM 15 C8 A A1122 -86.782 -67.939 -19.751 1.00 0.01 C
ATOM 16 N7 A A1122 -87.453 -66.932 -19.268 1.00 0.01 N
ATOM 17 C5 A A1122 -87.384 -65.959 -20.226 1.00 0.01 C
ATOM 18 C6 A A1122 -87.887 -64.654 -20.311 1.00 0.01 C
ATOM 19 N6 A A1122 -88.600 -64.034 -19.395 1.00 0.01 N
ATOM 20 N1 A A1122 -87.632 -63.969 -21.419 1.00 0.01 N
ATOM 21 C2 A A1122 -86.893 -64.558 -22.354 1.00 0.01 C
ATOM 22 N3 A A1122 -86.357 -65.769 -22.379 1.00 0.01 N
ATOM 23 C4 A A1122 -86.651 -66.427 -21.272 1.00 0.01 C
ATOM 24 P U A1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 25 OP1 U A1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 26 OP2 U A1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 27 O5' U A1123 -80.769 -71.796 -20.192 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 2 P U B1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 3 OP1 U B1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 4 OP2 U B1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 5 O5' U B1123 -80.769 -71.796 -20.192 1.00 0.01 O
ATOM 6 C5' U B1123 -80.639 -72.326 -21.500 1.00 0.01 C
ATOM 7 C4' U B1123 -79.673 -73.469 -21.540 1.00 0.01 C
ATOM 8 O4' U B1123 -78.946 -73.522 -20.286 1.00 0.01 O
ATOM 9 C3' U B1123 -80.308 -74.840 -21.716 1.00 0.01 C
ATOM 10 O3' U B1123 -79.452 -75.641 -22.503 1.00 0.01 O
ATOM 11 C2' U B1123 -80.322 -75.366 -20.293 1.00 0.01 C
ATOM 12 O2' U B1123 -80.403 -76.758 -20.163 1.00 0.01 O
ATOM 13 C1' U B1123 -79.004 -74.834 -19.788 1.00 0.01 C
ATOM 14 N1 U B1123 -78.900 -74.808 -18.319 1.00 0.01 N
ATOM 15 C2 U B1123 -77.898 -75.469 -17.627 1.00 0.01 C
ATOM 16 O2 U B1123 -76.979 -76.088 -18.102 1.00 0.01 O
ATOM 17 N3 U B1123 -77.977 -75.368 -16.288 1.00 0.01 N
ATOM 18 C4 U B1123 -78.934 -74.725 -15.577 1.00 0.01 C
ATOM 19 O4 U B1123 -78.899 -74.728 -14.366 1.00 0.01 O
ATOM 20 C5 U B1123 -79.929 -74.088 -16.325 1.00 0.01 C
ATOM 21 C6 U B1123 -79.881 -74.156 -17.641 1.00 0.01 C
ATOM 22 P G B1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 23 OP1 G B1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 24 OP2 G B1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 25 O5' G B1124 -80.621 -77.265 -23.975 1.00 0.01 O
TER
Atoms:
OP1: (-88.461,-73.392,-24.123)
OP2: (-89.000,-73.102,-21.650)
C3': (-84.274,-70.352,-20.860)
C1': (-85.480,-68.548,-21.827)
C5': (-86.164,-72.007,-21.406)
O4': (-86.199,-69.724,-21.999)
C8: (-86.782,-67.939,-19.751)
O2': (-83.166,-68.838,-22.350)
C6: (-87.887,-64.654,-20.311)
C5: (-87.384,-65.959,-20.226)
C4: (-86.651,-66.427,-21.272)
P: (-88.226,-72.684,-22.852)
C4': (-85.338,-70.842,-21.831)
C2': (-84.096,-68.911,-21.286)
C2: (-86.893,-64.558,-22.354)
N1: (-87.632,-63.969,-21.419)
N3: (-86.357,-65.769,-22.379)
N6: (-88.600,-64.034,-19.395)
N7: (-87.453,-66.932,-19.268)
N9: (-86.245,-67.675,-20.944)
O5': (-86.685,-72.678,-22.534)
O3': (-83.062,-71.100,-20.940)
OP2: (-89.000,-73.102,-21.650)
C3': (-84.274,-70.352,-20.860)
C1': (-85.480,-68.548,-21.827)
C5': (-86.164,-72.007,-21.406)
O4': (-86.199,-69.724,-21.999)
C8: (-86.782,-67.939,-19.751)
O2': (-83.166,-68.838,-22.350)
C6: (-87.887,-64.654,-20.311)
C5: (-87.384,-65.959,-20.226)
C4: (-86.651,-66.427,-21.272)
P: (-88.226,-72.684,-22.852)
C4': (-85.338,-70.842,-21.831)
C2': (-84.096,-68.911,-21.286)
C2: (-86.893,-64.558,-22.354)
N1: (-87.632,-63.969,-21.419)
N3: (-86.357,-65.769,-22.379)
N6: (-88.600,-64.034,-19.395)
N7: (-87.453,-66.932,-19.268)
N9: (-86.245,-67.675,-20.944)
O5': (-86.685,-72.678,-22.534)
O3': (-83.062,-71.100,-20.940)
C4: (-78.934,-74.725,-15.577)
N3: (-77.977,-75.368,-16.288)
OP1: (-82.793,-72.500,-18.918)
OP2: (-82.047,-70.038,-18.953)
C2: (-77.898,-75.469,-17.627)
C1': (-79.004,-74.834,-19.788)
C3': (-80.308,-74.840,-21.716)
O5': (-80.769,-71.796,-20.192)
O4': (-78.946,-73.522,-20.286)
C5': (-80.639,-72.326,-21.500)
P: (-82.176,-71.348,-19.632)
C4': (-79.673,-73.469,-21.540)
C2': (-80.322,-75.366,-20.293)
O2': (-80.403,-76.758,-20.163)
N1: (-78.900,-74.808,-18.319)
O4: (-78.899,-74.728,-14.366)
O2: (-76.979,-76.088,-18.102)
C6: (-79.881,-74.156,-17.641)
C5: (-79.929,-74.088,-16.325)
O3': (-79.452,-75.641,-22.503)
N3: (-77.977,-75.368,-16.288)
OP1: (-82.793,-72.500,-18.918)
OP2: (-82.047,-70.038,-18.953)
C2: (-77.898,-75.469,-17.627)
C1': (-79.004,-74.834,-19.788)
C3': (-80.308,-74.840,-21.716)
O5': (-80.769,-71.796,-20.192)
O4': (-78.946,-73.522,-20.286)
C5': (-80.639,-72.326,-21.500)
P: (-82.176,-71.348,-19.632)
C4': (-79.673,-73.469,-21.540)
C2': (-80.322,-75.366,-20.293)
O2': (-80.403,-76.758,-20.163)
N1: (-78.900,-74.808,-18.319)
O4: (-78.899,-74.728,-14.366)
O2: (-76.979,-76.088,-18.102)
C6: (-79.881,-74.156,-17.641)
C5: (-79.929,-74.088,-16.325)
O3': (-79.452,-75.641,-22.503)
Image (generated by PyMOL):