Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DXI:C53:C52
Extra
PDB:
ATOM 1 O3' U A 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 2 P U A 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U A 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U A 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U A 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U A 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U A 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U A 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U A 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U A 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U A 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U A 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U A 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U A 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U A 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U A 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U A 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U A 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U A 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U A 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U A 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C A 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C A 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C A 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C A 54 -10.788 80.344 43.772 1.00 91.83 O
TER
ATOM 1 O3' G B 51 -6.706 86.597 52.012 1.00 85.38 O
ATOM 2 P U B 52 -7.610 86.223 50.741 1.00 91.80 P
ATOM 3 OP1 U B 52 -8.403 87.427 50.367 1.00 94.10 O
ATOM 4 OP2 U B 52 -8.308 84.944 51.031 1.00 84.87 O
ATOM 5 O5' U B 52 -6.534 85.954 49.599 1.00 89.30 O
ATOM 6 C5' U B 52 -5.646 86.985 49.176 1.00 88.43 C
ATOM 7 C4' U B 52 -4.821 86.504 48.009 1.00 89.53 C
ATOM 8 O4' U B 52 -3.670 85.747 48.472 1.00 87.14 O
ATOM 9 C3' U B 52 -5.569 85.550 47.094 1.00 90.57 C
ATOM 10 O3' U B 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 11 C2' U B 52 -4.425 84.783 46.438 1.00 91.06 C
ATOM 12 O2' U B 52 -3.798 85.487 45.382 1.00 85.24 O
ATOM 13 C1' U B 52 -3.466 84.625 47.623 1.00 90.78 C
ATOM 14 N1 U B 52 -3.742 83.408 48.405 1.00 93.04 N
ATOM 15 C2 U B 52 -3.225 82.212 47.940 1.00 92.65 C
ATOM 16 O2 U B 52 -2.567 82.131 46.913 1.00 90.78 O
ATOM 17 N3 U B 52 -3.515 81.113 48.720 1.00 91.31 N
ATOM 18 C4 U B 52 -4.261 81.090 49.886 1.00 87.74 C
ATOM 19 O4 U B 52 -4.432 80.023 50.480 1.00 87.48 O
ATOM 20 C5 U B 52 -4.765 82.365 50.295 1.00 86.62 C
ATOM 21 C6 U B 52 -4.494 83.453 49.564 1.00 88.65 C
ATOM 22 P U B 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 23 OP1 U B 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 24 OP2 U B 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 25 O5' U B 53 -8.112 84.556 45.427 1.00 91.43 O
TER
ATOM 2 P U A 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U A 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U A 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U A 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U A 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U A 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U A 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U A 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U A 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U A 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U A 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U A 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U A 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U A 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U A 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U A 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U A 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U A 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U A 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U A 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C A 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C A 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C A 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C A 54 -10.788 80.344 43.772 1.00 91.83 O
TER
ATOM 1 O3' G B 51 -6.706 86.597 52.012 1.00 85.38 O
ATOM 2 P U B 52 -7.610 86.223 50.741 1.00 91.80 P
ATOM 3 OP1 U B 52 -8.403 87.427 50.367 1.00 94.10 O
ATOM 4 OP2 U B 52 -8.308 84.944 51.031 1.00 84.87 O
ATOM 5 O5' U B 52 -6.534 85.954 49.599 1.00 89.30 O
ATOM 6 C5' U B 52 -5.646 86.985 49.176 1.00 88.43 C
ATOM 7 C4' U B 52 -4.821 86.504 48.009 1.00 89.53 C
ATOM 8 O4' U B 52 -3.670 85.747 48.472 1.00 87.14 O
ATOM 9 C3' U B 52 -5.569 85.550 47.094 1.00 90.57 C
ATOM 10 O3' U B 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 11 C2' U B 52 -4.425 84.783 46.438 1.00 91.06 C
ATOM 12 O2' U B 52 -3.798 85.487 45.382 1.00 85.24 O
ATOM 13 C1' U B 52 -3.466 84.625 47.623 1.00 90.78 C
ATOM 14 N1 U B 52 -3.742 83.408 48.405 1.00 93.04 N
ATOM 15 C2 U B 52 -3.225 82.212 47.940 1.00 92.65 C
ATOM 16 O2 U B 52 -2.567 82.131 46.913 1.00 90.78 O
ATOM 17 N3 U B 52 -3.515 81.113 48.720 1.00 91.31 N
ATOM 18 C4 U B 52 -4.261 81.090 49.886 1.00 87.74 C
ATOM 19 O4 U B 52 -4.432 80.023 50.480 1.00 87.48 O
ATOM 20 C5 U B 52 -4.765 82.365 50.295 1.00 86.62 C
ATOM 21 C6 U B 52 -4.494 83.453 49.564 1.00 88.65 C
ATOM 22 P U B 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 23 OP1 U B 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 24 OP2 U B 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 25 O5' U B 53 -8.112 84.556 45.427 1.00 91.43 O
TER
Atoms:
C4: (-7.513,80.510,49.410)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
C4: (-4.261,81.090,49.886)
N3: (-3.515,81.113,48.720)
OP1: (-8.403,87.427,50.367)
OP2: (-8.308,84.944,51.031)
C2: (-3.225,82.212,47.940)
C1': (-3.466,84.625,47.623)
C3': (-5.569,85.550,47.094)
O5': (-6.534,85.954,49.599)
O4': (-3.670,85.747,48.472)
C5': (-5.646,86.985,49.176)
P: (-7.610,86.223,50.741)
C4': (-4.821,86.504,48.009)
C2': (-4.425,84.783,46.438)
O2': (-3.798,85.487,45.382)
N1: (-3.742,83.408,48.405)
O4: (-4.432,80.023,50.480)
O2: (-2.567,82.131,46.913)
C6: (-4.494,83.453,49.564)
C5: (-4.765,82.365,50.295)
O3': (-6.415,86.251,46.185)
N3: (-3.515,81.113,48.720)
OP1: (-8.403,87.427,50.367)
OP2: (-8.308,84.944,51.031)
C2: (-3.225,82.212,47.940)
C1': (-3.466,84.625,47.623)
C3': (-5.569,85.550,47.094)
O5': (-6.534,85.954,49.599)
O4': (-3.670,85.747,48.472)
C5': (-5.646,86.985,49.176)
P: (-7.610,86.223,50.741)
C4': (-4.821,86.504,48.009)
C2': (-4.425,84.783,46.438)
O2': (-3.798,85.487,45.382)
N1: (-3.742,83.408,48.405)
O4: (-4.432,80.023,50.480)
O2: (-2.567,82.131,46.913)
C6: (-4.494,83.453,49.564)
C5: (-4.765,82.365,50.295)
O3': (-6.415,86.251,46.185)
Image (generated by PyMOL):