ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4B:B11:B36

Extra

PDB:
ATOM 1 O3' U A 10 56.071 15.697 25.781 1.00 21.31 O
ATOM 2 P G A 11 54.991 14.542 25.474 1.00 21.45 P
ATOM 3 OP1 G A 11 53.682 15.018 25.988 1.00 22.52 O
ATOM 4 OP2 G A 11 55.516 13.232 25.929 1.00 21.50 O
ATOM 5 O5' G A 11 54.930 14.487 23.882 1.00 21.93 O
ATOM 6 C5' G A 11 54.849 15.682 23.111 1.00 20.61 C
ATOM 7 C4' G A 11 55.454 15.460 21.756 1.00 21.01 C
ATOM 8 O4' G A 11 56.869 15.187 21.903 1.00 21.62 O
ATOM 9 C3' G A 11 54.919 14.254 21.001 1.00 21.11 C
ATOM 10 O3' G A 11 53.726 14.606 20.321 1.00 21.69 O
ATOM 11 C2' G A 11 56.057 13.939 20.035 1.00 21.07 C
ATOM 12 O2' G A 11 56.037 14.725 18.853 1.00 18.70 O
ATOM 13 C1' G A 11 57.284 14.274 20.893 1.00 21.55 C
ATOM 14 N9 G A 11 57.873 13.116 21.552 1.00 21.67 N
ATOM 15 C8 G A 11 57.463 12.546 22.730 1.00 22.27 C
ATOM 16 N7 G A 11 58.190 11.522 23.083 1.00 23.55 N
ATOM 17 C5 G A 11 59.134 11.410 22.078 1.00 23.11 C
ATOM 18 C6 G A 11 60.185 10.481 21.918 1.00 24.64 C
ATOM 19 O6 G A 11 60.495 9.539 22.660 1.00 26.63 O
ATOM 20 N1 G A 11 60.911 10.725 20.752 1.00 26.51 N
ATOM 21 C2 G A 11 60.646 11.739 19.855 1.00 25.30 C
ATOM 22 N2 G A 11 61.451 11.818 18.788 1.00 23.82 N
ATOM 23 N3 G A 11 59.660 12.610 19.998 1.00 24.61 N
ATOM 24 C4 G A 11 58.950 12.387 21.122 1.00 22.64 C
ATOM 25 P A A 12 52.345 13.863 20.684 1.00 23.03 P
ATOM 26 OP1 A A 12 52.337 13.522 22.143 1.00 22.65 O
ATOM 27 OP2 A A 12 52.185 12.774 19.681 1.00 20.59 O
ATOM 28 O5' A A 12 51.244 14.995 20.406 1.00 21.48 O
TER

ATOM 1 O3' A B 35 55.376 19.424 18.196 1.00 24.55 O
ATOM 2 P U B 36 55.019 18.543 19.486 1.00 26.68 P
ATOM 3 OP1 U B 36 55.102 19.399 20.695 1.00 27.32 O
ATOM 4 OP2 U B 36 55.868 17.320 19.403 1.00 23.74 O
ATOM 5 O5' U B 36 53.479 18.186 19.217 1.00 27.58 O
ATOM 6 C5' U B 36 53.109 17.181 18.266 1.00 26.27 C
ATOM 7 C4' U B 36 51.933 17.615 17.397 1.00 26.17 C
ATOM 8 O4' U B 36 50.738 17.823 18.203 1.00 26.43 O
ATOM 9 C3' U B 36 52.201 18.950 16.708 1.00 26.66 C
ATOM 10 O3' U B 36 51.909 18.950 15.312 1.00 28.64 O
ATOM 11 C2' U B 36 51.468 20.008 17.526 1.00 26.25 C
ATOM 12 O2' U B 36 50.835 20.956 16.700 1.00 27.62 O
ATOM 13 C1' U B 36 50.357 19.178 18.159 1.00 25.95 C
ATOM 14 N1 U B 36 49.742 19.602 19.426 1.00 25.65 N
ATOM 15 C2 U B 36 48.495 20.211 19.344 1.00 25.09 C
ATOM 16 O2 U B 36 47.918 20.402 18.292 1.00 26.76 O
ATOM 17 N3 U B 36 47.945 20.586 20.543 1.00 25.36 N
ATOM 18 C4 U B 36 48.494 20.428 21.794 1.00 24.80 C
ATOM 19 O4 U B 36 47.862 20.813 22.786 1.00 26.24 O
ATOM 20 C5 U B 36 49.786 19.799 21.803 1.00 25.08 C
ATOM 21 C6 U B 36 50.353 19.415 20.645 1.00 25.89 C
ATOM 22 P C B 37 52.913 18.252 14.274 1.00 29.77 P
ATOM 23 OP1 C B 37 52.300 18.373 12.922 1.00 30.41 O
ATOM 24 OP2 C B 37 53.249 16.902 14.807 1.00 30.50 O
ATOM 25 O5' C B 37 54.214 19.170 14.324 1.00 29.78 O
TER

Atoms:
OP1: (53.682,15.018,25.988)
OP2: (55.516,13.232,25.929)
C3': (54.919,14.254,21.001)
C1': (57.284,14.274,20.893)
C5': (54.849,15.682,23.111)
O6: (60.495,9.539,22.660)
O4': (56.869,15.187,21.903)
C8: (57.463,12.546,22.730)
C2: (60.646,11.739,19.855)
C6: (60.185,10.481,21.918)
C5: (59.134,11.410,22.078)
C4: (58.950,12.387,21.122)
P: (54.991,14.542,25.474)
C4': (55.454,15.460,21.756)
C2': (56.057,13.939,20.035)
O2': (56.037,14.725,18.853)
N1: (60.911,10.725,20.752)
N2: (61.451,11.818,18.788)
N3: (59.660,12.610,19.998)
N7: (58.190,11.522,23.083)
N9: (57.873,13.116,21.552)
O5': (54.930,14.487,23.882)
O3': (53.726,14.606,20.321)
C4: (48.494,20.428,21.794)
N3: (47.945,20.586,20.543)
OP1: (55.102,19.399,20.695)
OP2: (55.868,17.320,19.403)
C2: (48.495,20.211,19.344)
C1': (50.357,19.178,18.159)
C3': (52.201,18.950,16.708)
O5': (53.479,18.186,19.217)
O4': (50.738,17.823,18.203)
C5': (53.109,17.181,18.266)
P: (55.019,18.543,19.486)
C4': (51.933,17.615,17.397)
C2': (51.468,20.008,17.526)
O2': (50.835,20.956,16.700)
N1: (49.742,19.602,19.426)
O4: (47.862,20.813,22.786)
O2: (47.918,20.402,18.292)
C6: (50.353,19.415,20.645)
C5: (49.786,19.799,21.803)
O3': (51.909,18.950,15.312)
Image (generated by PyMOL):
PyMOL image
show in jmol