ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:535:534

Extra

PDB:
ATOM 1 O3' U A 34 138.168 -21.320 214.160 1.00 39.77 O
ATOM 2 P U A 35 138.285 -22.358 215.371 1.00 39.41 P
ATOM 3 OP1 U A 35 137.569 -21.780 216.522 1.00 39.10 O
ATOM 4 OP2 U A 35 139.675 -22.686 215.527 1.00 39.36 O
ATOM 5 O5' U A 35 137.507 -23.621 214.775 1.00 39.80 O
ATOM 6 C5' U A 35 136.614 -24.398 215.546 1.00 39.82 C
ATOM 7 C4' U A 35 136.756 -25.874 215.244 1.00 40.15 C
ATOM 8 O4' U A 35 137.395 -26.093 213.955 1.00 40.44 O
ATOM 9 C3' U A 35 137.633 -26.640 216.183 1.00 40.04 C
ATOM 10 O3' U A 35 137.012 -26.901 217.388 1.00 39.87 O
ATOM 11 C2' U A 35 137.928 -27.885 215.406 1.00 40.44 C
ATOM 12 O2' U A 35 136.795 -28.737 215.448 1.00 40.66 O
ATOM 13 C1' U A 35 138.105 -27.310 213.990 1.00 40.63 C
ATOM 14 N1 U A 35 139.525 -27.029 213.719 1.00 40.57 N
ATOM 15 C2 U A 35 140.424 -28.092 213.634 1.00 40.75 C
ATOM 16 O2 U A 35 140.094 -29.275 213.716 1.00 40.99 O
ATOM 17 N3 U A 35 141.744 -27.747 213.449 1.00 40.68 N
ATOM 18 C4 U A 35 142.278 -26.474 213.352 1.00 40.43 C
ATOM 19 O4 U A 35 143.511 -26.288 213.220 1.00 40.39 O
ATOM 20 C5 U A 35 141.265 -25.454 213.437 1.00 40.25 C
ATOM 21 C6 U A 35 139.972 -25.740 213.631 1.00 40.32 C
ATOM 22 P A A 36 137.693 -26.392 218.679 1.00 40.66 P
ATOM 23 OP1 A A 36 136.631 -26.130 219.651 1.00 40.48 O
ATOM 24 OP2 A A 36 138.565 -25.295 218.251 1.00 40.49 O
ATOM 25 O5' A A 36 138.563 -27.616 219.138 1.00 40.76 O
TER

ATOM 1 O3' C B 33 142.282 -18.114 211.586 1.00 39.06 O
ATOM 2 P U B 34 142.365 -19.019 212.894 1.00 39.50 P
ATOM 3 OP1 U B 34 142.278 -18.067 214.034 1.00 39.10 O
ATOM 4 OP2 U B 34 143.557 -19.891 212.781 1.00 39.63 O
ATOM 5 O5' U B 34 141.060 -19.904 212.795 1.00 39.71 O
ATOM 6 C5' U B 34 139.824 -19.325 212.488 1.00 39.75 C
ATOM 7 C4' U B 34 138.884 -20.371 212.060 1.00 40.06 C
ATOM 8 O4' U B 34 139.318 -20.928 210.787 1.00 40.43 O
ATOM 9 C3' U B 34 138.855 -21.561 212.953 1.00 40.05 C
ATOM 10 O3' U B 34 138.168 -21.320 214.160 1.00 39.77 O
ATOM 11 C2' U B 34 138.244 -22.622 212.037 1.00 40.47 C
ATOM 12 O2' U B 34 136.879 -22.395 211.866 1.00 40.55 O
ATOM 13 C1' U B 34 138.939 -22.293 210.712 1.00 40.70 C
ATOM 14 N1 U B 34 140.149 -23.125 210.532 1.00 40.83 N
ATOM 15 C2 U B 34 139.967 -24.450 210.195 1.00 41.16 C
ATOM 16 O2 U B 34 138.859 -24.868 209.936 1.00 41.35 O
ATOM 17 N3 U B 34 141.090 -25.258 210.118 1.00 41.28 N
ATOM 18 C4 U B 34 142.343 -24.804 210.397 1.00 41.08 C
ATOM 19 O4 U B 34 143.294 -25.542 210.298 1.00 41.21 O
ATOM 20 C5 U B 34 142.448 -23.444 210.769 1.00 40.74 C
ATOM 21 C6 U B 34 141.390 -22.680 210.848 1.00 40.62 C
ATOM 22 P U B 35 138.285 -22.358 215.371 1.00 39.41 P
ATOM 23 OP1 U B 35 137.569 -21.780 216.522 1.00 39.10 O
ATOM 24 OP2 U B 35 139.675 -22.686 215.527 1.00 39.36 O
ATOM 25 O5' U B 35 137.507 -23.621 214.775 1.00 39.80 O
TER

Atoms:
C4: (142.278,-26.474,213.352)
N3: (141.744,-27.747,213.449)
OP1: (137.569,-21.780,216.522)
OP2: (139.675,-22.686,215.527)
C2: (140.424,-28.092,213.634)
C1': (138.105,-27.310,213.990)
C3': (137.633,-26.640,216.183)
O5': (137.507,-23.621,214.775)
O4': (137.395,-26.093,213.955)
C5': (136.614,-24.398,215.546)
P: (138.285,-22.358,215.371)
C4': (136.756,-25.874,215.244)
C2': (137.928,-27.885,215.406)
O2': (136.795,-28.737,215.448)
N1: (139.525,-27.029,213.719)
O4: (143.511,-26.288,213.220)
O2: (140.094,-29.275,213.716)
C6: (139.972,-25.740,213.631)
C5: (141.265,-25.454,213.437)
O3': (137.012,-26.901,217.388)
C4: (142.343,-24.804,210.397)
N3: (141.090,-25.258,210.118)
OP1: (142.278,-18.067,214.034)
OP2: (143.557,-19.891,212.781)
C2: (139.967,-24.450,210.195)
C1': (138.939,-22.293,210.712)
C3': (138.855,-21.561,212.953)
O5': (141.060,-19.904,212.795)
O4': (139.318,-20.928,210.787)
C5': (139.824,-19.325,212.488)
P: (142.365,-19.019,212.894)
C4': (138.884,-20.371,212.060)
C2': (138.244,-22.622,212.037)
O2': (136.879,-22.395,211.866)
N1: (140.149,-23.125,210.532)
O4: (143.294,-25.542,210.298)
O2: (138.859,-24.868,209.936)
C6: (141.390,-22.680,210.848)
C5: (142.448,-23.444,210.769)
O3': (138.168,-21.320,214.160)
Image (generated by PyMOL):
PyMOL image
show in jmol