Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:135:134
Extra
PDB:
ATOM 1 O3' U A 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 2 P U A 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 3 OP1 U A 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 4 OP2 U A 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 5 O5' U A 35 44.120 -23.522 85.177 1.00 32.61 O
ATOM 6 C5' U A 35 45.375 -24.027 84.838 1.00 32.66 C
ATOM 7 C4' U A 35 45.426 -25.461 85.207 1.00 32.84 C
ATOM 8 O4' U A 35 45.024 -25.579 86.590 1.00 33.01 O
ATOM 9 C3' U A 35 44.433 -26.315 84.511 1.00 32.81 C
ATOM 10 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 11 C2' U A 35 44.283 -27.486 85.464 1.00 33.05 C
ATOM 12 O2' U A 35 45.359 -28.344 85.342 1.00 33.17 O
ATOM 13 C1' U A 35 44.375 -26.792 86.814 1.00 33.14 C
ATOM 14 N1 U A 35 43.044 -26.508 87.368 1.00 33.15 N
ATOM 15 C2 U A 35 42.331 -27.556 87.893 1.00 33.32 C
ATOM 16 O2 U A 35 42.827 -28.677 87.991 1.00 33.47 O
ATOM 17 N3 U A 35 41.054 -27.255 88.313 1.00 33.32 N
ATOM 18 C4 U A 35 40.406 -26.038 88.235 1.00 33.17 C
ATOM 19 O4 U A 35 39.249 -25.916 88.657 1.00 33.20 O
ATOM 20 C5 U A 35 41.188 -25.004 87.656 1.00 33.00 C
ATOM 21 C6 U A 35 42.445 -25.276 87.260 1.00 33.00 C
ATOM 22 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 23 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 24 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 25 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
TER
ATOM 1 O3' C B 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 2 P U B 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 3 OP1 U B 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 4 OP2 U B 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 5 O5' U B 34 41.464 -19.585 88.004 1.00 32.42 O
ATOM 6 C5' U B 34 42.724 -19.107 87.579 1.00 32.35 C
ATOM 7 C4' U B 34 43.813 -20.042 87.977 1.00 32.49 C
ATOM 8 O4' U B 34 43.636 -20.420 89.362 1.00 32.71 O
ATOM 9 C3' U B 34 43.811 -21.341 87.270 1.00 32.48 C
ATOM 10 O3' U B 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 11 C2' U B 34 44.604 -22.217 88.226 1.00 32.70 C
ATOM 12 O2' U B 34 45.956 -21.847 88.210 1.00 32.72 O
ATOM 13 C1' U B 34 44.055 -21.745 89.553 1.00 32.84 C
ATOM 14 N1 U B 34 42.905 -22.523 90.008 1.00 32.94 N
ATOM 15 C2 U B 34 43.165 -23.708 90.560 1.00 33.13 C
ATOM 16 O2 U B 34 44.296 -24.026 90.626 1.00 33.20 O
ATOM 17 N3 U B 34 42.097 -24.449 91.000 1.00 33.23 N
ATOM 18 C4 U B 34 40.776 -24.048 90.919 1.00 33.16 C
ATOM 19 O4 U B 34 39.886 -24.754 91.356 1.00 33.28 O
ATOM 20 C5 U B 34 40.582 -22.772 90.332 1.00 32.96 C
ATOM 21 C6 U B 34 41.616 -22.047 89.908 1.00 32.86 C
ATOM 22 P U B 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 23 OP1 U B 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 24 OP2 U B 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 25 O5' U B 35 44.120 -23.522 85.177 1.00 32.61 O
TER
ATOM 2 P U A 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 3 OP1 U A 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 4 OP2 U A 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 5 O5' U A 35 44.120 -23.522 85.177 1.00 32.61 O
ATOM 6 C5' U A 35 45.375 -24.027 84.838 1.00 32.66 C
ATOM 7 C4' U A 35 45.426 -25.461 85.207 1.00 32.84 C
ATOM 8 O4' U A 35 45.024 -25.579 86.590 1.00 33.01 O
ATOM 9 C3' U A 35 44.433 -26.315 84.511 1.00 32.81 C
ATOM 10 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 11 C2' U A 35 44.283 -27.486 85.464 1.00 33.05 C
ATOM 12 O2' U A 35 45.359 -28.344 85.342 1.00 33.17 O
ATOM 13 C1' U A 35 44.375 -26.792 86.814 1.00 33.14 C
ATOM 14 N1 U A 35 43.044 -26.508 87.368 1.00 33.15 N
ATOM 15 C2 U A 35 42.331 -27.556 87.893 1.00 33.32 C
ATOM 16 O2 U A 35 42.827 -28.677 87.991 1.00 33.47 O
ATOM 17 N3 U A 35 41.054 -27.255 88.313 1.00 33.32 N
ATOM 18 C4 U A 35 40.406 -26.038 88.235 1.00 33.17 C
ATOM 19 O4 U A 35 39.249 -25.916 88.657 1.00 33.20 O
ATOM 20 C5 U A 35 41.188 -25.004 87.656 1.00 33.00 C
ATOM 21 C6 U A 35 42.445 -25.276 87.260 1.00 33.00 C
ATOM 22 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 23 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 24 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 25 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
TER
ATOM 1 O3' C B 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 2 P U B 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 3 OP1 U B 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 4 OP2 U B 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 5 O5' U B 34 41.464 -19.585 88.004 1.00 32.42 O
ATOM 6 C5' U B 34 42.724 -19.107 87.579 1.00 32.35 C
ATOM 7 C4' U B 34 43.813 -20.042 87.977 1.00 32.49 C
ATOM 8 O4' U B 34 43.636 -20.420 89.362 1.00 32.71 O
ATOM 9 C3' U B 34 43.811 -21.341 87.270 1.00 32.48 C
ATOM 10 O3' U B 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 11 C2' U B 34 44.604 -22.217 88.226 1.00 32.70 C
ATOM 12 O2' U B 34 45.956 -21.847 88.210 1.00 32.72 O
ATOM 13 C1' U B 34 44.055 -21.745 89.553 1.00 32.84 C
ATOM 14 N1 U B 34 42.905 -22.523 90.008 1.00 32.94 N
ATOM 15 C2 U B 34 43.165 -23.708 90.560 1.00 33.13 C
ATOM 16 O2 U B 34 44.296 -24.026 90.626 1.00 33.20 O
ATOM 17 N3 U B 34 42.097 -24.449 91.000 1.00 33.23 N
ATOM 18 C4 U B 34 40.776 -24.048 90.919 1.00 33.16 C
ATOM 19 O4 U B 34 39.886 -24.754 91.356 1.00 33.28 O
ATOM 20 C5 U B 34 40.582 -22.772 90.332 1.00 32.96 C
ATOM 21 C6 U B 34 41.616 -22.047 89.908 1.00 32.86 C
ATOM 22 P U B 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 23 OP1 U B 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 24 OP2 U B 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 25 O5' U B 35 44.120 -23.522 85.177 1.00 32.61 O
TER
Atoms:
C4: (40.406,-26.038,88.235)
N3: (41.054,-27.255,88.313)
OP1: (44.290,-21.642,83.534)
OP2: (42.192,-21.956,84.961)
C2: (42.331,-27.556,87.893)
C1': (44.375,-26.792,86.814)
C3': (44.433,-26.315,84.511)
O5': (44.120,-23.522,85.177)
O4': (45.024,-25.579,86.590)
C5': (45.375,-24.027,84.838)
P: (43.681,-22.066,84.811)
C4': (45.426,-25.461,85.207)
C2': (44.283,-27.486,85.464)
O2': (45.359,-28.344,85.342)
N1: (43.044,-26.508,87.368)
O4: (39.249,-25.916,88.657)
O2: (42.827,-28.677,87.991)
C6: (42.445,-25.276,87.260)
C5: (41.188,-25.004,87.656)
O3': (44.801,-26.656,83.196)
N3: (41.054,-27.255,88.313)
OP1: (44.290,-21.642,83.534)
OP2: (42.192,-21.956,84.961)
C2: (42.331,-27.556,87.893)
C1': (44.375,-26.792,86.814)
C3': (44.433,-26.315,84.511)
O5': (44.120,-23.522,85.177)
O4': (45.024,-25.579,86.590)
C5': (45.375,-24.027,84.838)
P: (43.681,-22.066,84.811)
C4': (45.426,-25.461,85.207)
C2': (44.283,-27.486,85.464)
O2': (45.359,-28.344,85.342)
N1: (43.044,-26.508,87.368)
O4: (39.249,-25.916,88.657)
O2: (42.827,-28.677,87.991)
C6: (42.445,-25.276,87.260)
C5: (41.188,-25.004,87.656)
O3': (44.801,-26.656,83.196)
C4: (40.776,-24.048,90.919)
N3: (42.097,-24.449,91.000)
OP1: (40.268,-18.041,86.462)
OP2: (38.998,-19.529,88.030)
C2: (43.165,-23.708,90.560)
C1': (44.055,-21.745,89.553)
C3': (43.811,-21.341,87.270)
O5': (41.464,-19.585,88.004)
O4': (43.636,-20.420,89.362)
C5': (42.724,-19.107,87.579)
P: (40.175,-18.726,87.745)
C4': (43.813,-20.042,87.977)
C2': (44.604,-22.217,88.226)
O2': (45.956,-21.847,88.210)
N1: (42.905,-22.523,90.008)
O4: (39.886,-24.754,91.356)
O2: (44.296,-24.026,90.626)
C6: (41.616,-22.047,89.908)
C5: (40.582,-22.772,90.332)
O3': (44.340,-21.234,85.986)
N3: (42.097,-24.449,91.000)
OP1: (40.268,-18.041,86.462)
OP2: (38.998,-19.529,88.030)
C2: (43.165,-23.708,90.560)
C1': (44.055,-21.745,89.553)
C3': (43.811,-21.341,87.270)
O5': (41.464,-19.585,88.004)
O4': (43.636,-20.420,89.362)
C5': (42.724,-19.107,87.579)
P: (40.175,-18.726,87.745)
C4': (43.813,-20.042,87.977)
C2': (44.604,-22.217,88.226)
O2': (45.956,-21.847,88.210)
N1: (42.905,-22.523,90.008)
O4: (39.886,-24.754,91.356)
O2: (44.296,-24.026,90.626)
C6: (41.616,-22.047,89.908)
C5: (40.582,-22.772,90.332)
O3': (44.340,-21.234,85.986)
Image (generated by PyMOL):