ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01257:01256

Extra

PDB:
ATOM 1 O3' U A1256 31.048 94.534 66.635 1.00 33.29 O
ATOM 2 P U A1257 30.555 95.721 65.673 1.00 35.13 P
ATOM 3 OP1 U A1257 30.355 95.118 64.331 1.00 35.39 O
ATOM 4 OP2 U A1257 31.457 96.895 65.832 1.00 36.89 O
ATOM 5 O5' U A1257 29.140 96.154 66.254 1.00 35.51 O
ATOM 6 C5' U A1257 28.036 95.244 66.235 1.00 36.98 C
ATOM 7 C4' U A1257 26.843 95.861 66.909 1.00 37.31 C
ATOM 8 O4' U A1257 27.165 96.151 68.291 1.00 38.15 O
ATOM 9 C3' U A1257 26.379 97.193 66.356 1.00 38.33 C
ATOM 10 O3' U A1257 25.530 97.009 65.232 1.00 42.19 O
ATOM 11 C2' U A1257 25.591 97.751 67.525 1.00 40.35 C
ATOM 12 O2' U A1257 24.318 97.139 67.613 1.00 45.54 O
ATOM 13 C1' U A1257 26.444 97.295 68.710 1.00 38.00 C
ATOM 14 N1 U A1257 27.382 98.320 69.204 1.00 37.65 N
ATOM 15 C2 U A1257 26.851 99.350 69.955 1.00 36.30 C
ATOM 16 O2 U A1257 25.666 99.451 70.190 1.00 36.76 O
ATOM 17 N3 U A1257 27.760 100.264 70.419 1.00 36.39 N
ATOM 18 C4 U A1257 29.116 100.266 70.212 1.00 37.03 C
ATOM 19 O4 U A1257 29.801 101.131 70.754 1.00 38.72 O
ATOM 20 C5 U A1257 29.602 99.182 69.411 1.00 35.84 C
ATOM 21 C6 U A1257 28.742 98.267 68.946 1.00 37.52 C
ATOM 22 P G A1258 25.174 98.260 64.283 1.00 46.24 P
ATOM 23 OP1 G A1258 24.579 97.696 63.041 1.00 43.78 O
ATOM 24 OP2 G A1258 26.392 99.118 64.189 1.00 44.73 O
ATOM 25 O5' G A1258 24.061 99.084 65.090 1.00 43.15 O
TER

ATOM 1 O3' A B1255 36.667 94.987 69.036 1.00 29.57 O
ATOM 2 P U B1256 35.747 95.880 68.073 1.00 29.24 P
ATOM 3 OP1 U B1256 36.094 95.530 66.681 1.00 26.24 O
ATOM 4 OP2 U B1256 35.841 97.286 68.525 1.00 28.69 O
ATOM 5 O5' U B1256 34.266 95.382 68.380 1.00 31.67 O
ATOM 6 C5' U B1256 33.866 94.027 68.103 1.00 31.78 C
ATOM 7 C4' U B1256 32.430 93.815 68.512 1.00 33.10 C
ATOM 8 O4' U B1256 32.301 93.951 69.951 1.00 33.23 O
ATOM 9 C3' U B1256 31.433 94.828 67.971 1.00 33.49 C
ATOM 10 O3' U B1256 31.048 94.534 66.635 1.00 33.29 O
ATOM 11 C2' U B1256 30.276 94.685 68.948 1.00 32.54 C
ATOM 12 O2' U B1256 29.512 93.527 68.712 1.00 34.74 O
ATOM 13 C1' U B1256 31.025 94.494 70.263 1.00 32.38 C
ATOM 14 N1 U B1256 31.197 95.763 70.983 1.00 33.77 N
ATOM 15 C2 U B1256 30.122 96.215 71.727 1.00 34.76 C
ATOM 16 O2 U B1256 29.073 95.604 71.810 1.00 37.12 O
ATOM 17 N3 U B1256 30.321 97.413 72.366 1.00 34.52 N
ATOM 18 C4 U B1256 31.459 98.194 72.337 1.00 32.63 C
ATOM 19 O4 U B1256 31.467 99.266 72.938 1.00 29.94 O
ATOM 20 C5 U B1256 32.531 97.660 71.554 1.00 30.87 C
ATOM 21 C6 U B1256 32.370 96.491 70.921 1.00 32.77 C
ATOM 22 P U B1257 30.555 95.721 65.673 1.00 35.13 P
ATOM 23 OP1 U B1257 30.355 95.118 64.331 1.00 35.39 O
ATOM 24 OP2 U B1257 31.457 96.895 65.832 1.00 36.89 O
ATOM 25 O5' U B1257 29.140 96.154 66.254 1.00 35.51 O
TER

Atoms:
C4: (29.116,100.266,70.212)
N3: (27.760,100.264,70.419)
OP1: (30.355,95.118,64.331)
OP2: (31.457,96.895,65.832)
C2: (26.851,99.350,69.955)
C1': (26.444,97.295,68.710)
C3': (26.379,97.193,66.356)
O5': (29.140,96.154,66.254)
O4': (27.165,96.151,68.291)
C5': (28.036,95.244,66.235)
P: (30.555,95.721,65.673)
C4': (26.843,95.861,66.909)
C2': (25.591,97.751,67.525)
O2': (24.318,97.139,67.613)
N1: (27.382,98.320,69.204)
O4: (29.801,101.131,70.754)
O2: (25.666,99.451,70.190)
C6: (28.742,98.267,68.946)
C5: (29.602,99.182,69.411)
O3': (25.530,97.009,65.232)
C4: (31.459,98.194,72.337)
N3: (30.321,97.413,72.366)
OP1: (36.094,95.530,66.681)
OP2: (35.841,97.286,68.525)
C2: (30.122,96.215,71.727)
C1': (31.025,94.494,70.263)
C3': (31.433,94.828,67.971)
O5': (34.266,95.382,68.380)
O4': (32.301,93.951,69.951)
C5': (33.866,94.027,68.103)
P: (35.747,95.880,68.073)
C4': (32.430,93.815,68.512)
C2': (30.276,94.685,68.948)
O2': (29.512,93.527,68.712)
N1: (31.197,95.763,70.983)
O4: (31.467,99.266,72.938)
O2: (29.073,95.604,71.810)
C6: (32.370,96.491,70.921)
C5: (32.531,97.660,71.554)
O3': (31.048,94.534,66.635)
Image (generated by PyMOL):
PyMOL image
show in jmol