ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02228:02227

Extra

PDB:
ATOM 1 O3' U A2227 54.093 59.870 68.935 1.00 54.21 O
ATOM 2 P U A2228 53.910 61.410 69.357 1.00 55.58 P
ATOM 3 OP1 U A2228 52.472 61.752 69.187 1.00 56.90 O
ATOM 4 OP2 U A2228 54.950 62.216 68.655 1.00 54.81 O
ATOM 5 O5' U A2228 54.247 61.438 70.916 1.00 53.50 O
ATOM 6 C5' U A2228 53.526 60.611 71.832 1.00 49.90 C
ATOM 7 C4' U A2228 54.295 60.448 73.120 1.00 49.01 C
ATOM 8 O4' U A2228 55.589 59.843 72.855 1.00 49.88 O
ATOM 9 C3' U A2228 54.667 61.710 73.874 1.00 46.65 C
ATOM 10 O3' U A2228 53.573 62.242 74.605 1.00 43.55 O
ATOM 11 C2' U A2228 55.754 61.188 74.805 1.00 47.51 C
ATOM 12 O2' U A2228 55.231 60.438 75.878 1.00 49.21 O
ATOM 13 C1' U A2228 56.497 60.225 73.881 1.00 48.62 C
ATOM 14 N1 U A2228 57.702 60.833 73.291 1.00 48.51 N
ATOM 15 C2 U A2228 58.853 60.845 74.072 1.00 48.76 C
ATOM 16 O2 U A2228 58.888 60.396 75.207 1.00 50.38 O
ATOM 17 N3 U A2228 59.958 61.399 73.477 1.00 47.09 N
ATOM 18 C4 U A2228 60.032 61.938 72.214 1.00 46.46 C
ATOM 19 O4 U A2228 61.104 62.388 71.814 1.00 45.40 O
ATOM 20 C5 U A2228 58.800 61.912 71.476 1.00 45.73 C
ATOM 21 C6 U A2228 57.706 61.373 72.024 1.00 45.64 C
ATOM 22 P C A2229 53.485 63.830 74.868 1.00 44.91 P
ATOM 23 OP1 C A2229 52.107 64.092 75.350 1.00 41.77 O
ATOM 24 OP2 C A2229 53.993 64.549 73.663 1.00 42.79 O
ATOM 25 O5' C A2229 54.499 64.107 76.068 1.00 41.57 O
TER

ATOM 1 O3' G B2226 58.108 60.071 64.369 1.00 53.91 O
ATOM 2 P U B2227 57.386 61.084 65.374 1.00 53.83 P
ATOM 3 OP1 U B2227 56.171 61.584 64.673 1.00 55.66 O
ATOM 4 OP2 U B2227 58.388 62.051 65.895 1.00 52.94 O
ATOM 5 O5' U B2227 56.916 60.138 66.567 1.00 55.91 O
ATOM 6 C5' U B2227 55.891 59.142 66.361 1.00 53.37 C
ATOM 7 C4' U B2227 55.610 58.419 67.650 1.00 53.24 C
ATOM 8 O4' U B2227 56.767 57.620 68.010 1.00 52.38 O
ATOM 9 C3' U B2227 55.405 59.323 68.855 1.00 54.85 C
ATOM 10 O3' U B2227 54.093 59.870 68.935 1.00 54.21 O
ATOM 11 C2' U B2227 55.752 58.397 70.007 1.00 52.51 C
ATOM 12 O2' U B2227 54.709 57.480 70.266 1.00 53.63 O
ATOM 13 C1' U B2227 56.949 57.648 69.420 1.00 51.71 C
ATOM 14 N1 U B2227 58.231 58.315 69.704 1.00 50.91 N
ATOM 15 C2 U B2227 58.757 58.213 70.987 1.00 52.06 C
ATOM 16 O2 U B2227 58.182 57.652 71.902 1.00 54.12 O
ATOM 17 N3 U B2227 59.993 58.784 71.151 1.00 51.23 N
ATOM 18 C4 U B2227 60.737 59.434 70.191 1.00 51.00 C
ATOM 19 O4 U B2227 61.862 59.844 70.479 1.00 51.93 O
ATOM 20 C5 U B2227 60.102 59.559 68.919 1.00 49.74 C
ATOM 21 C6 U B2227 58.901 59.014 68.723 1.00 50.26 C
ATOM 22 P U B2228 53.910 61.410 69.357 1.00 55.58 P
ATOM 23 OP1 U B2228 52.472 61.752 69.187 1.00 56.90 O
ATOM 24 OP2 U B2228 54.950 62.216 68.655 1.00 54.81 O
ATOM 25 O5' U B2228 54.247 61.438 70.916 1.00 53.50 O
TER

Atoms:
C4: (60.032,61.938,72.214)
N3: (59.958,61.399,73.477)
OP1: (52.472,61.752,69.187)
OP2: (54.950,62.216,68.655)
C2: (58.853,60.845,74.072)
C1': (56.497,60.225,73.881)
C3': (54.667,61.710,73.874)
O5': (54.247,61.438,70.916)
O4': (55.589,59.843,72.855)
C5': (53.526,60.611,71.832)
P: (53.910,61.410,69.357)
C4': (54.295,60.448,73.120)
C2': (55.754,61.188,74.805)
O2': (55.231,60.438,75.878)
N1: (57.702,60.833,73.291)
O4: (61.104,62.388,71.814)
O2: (58.888,60.396,75.207)
C6: (57.706,61.373,72.024)
C5: (58.800,61.912,71.476)
O3': (53.573,62.242,74.605)
C4: (60.737,59.434,70.191)
N3: (59.993,58.784,71.151)
OP1: (56.171,61.584,64.673)
OP2: (58.388,62.051,65.895)
C2: (58.757,58.213,70.987)
C1': (56.949,57.648,69.420)
C3': (55.405,59.323,68.855)
O5': (56.916,60.138,66.567)
O4': (56.767,57.620,68.010)
C5': (55.891,59.142,66.361)
P: (57.386,61.084,65.374)
C4': (55.610,58.419,67.650)
C2': (55.752,58.397,70.007)
O2': (54.709,57.480,70.266)
N1: (58.231,58.315,69.704)
O4: (61.862,59.844,70.479)
O2: (58.182,57.652,71.902)
C6: (58.901,59.014,68.723)
C5: (60.102,59.559,68.919)
O3': (54.093,59.870,68.935)
Image (generated by PyMOL):
PyMOL image
show in jmol