Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0301:0300
Extra
PDB:
ATOM 1 O3' U A 300 -3.475 144.969 49.344 1.00 78.49 O
ATOM 2 P U A 301 -2.504 146.115 49.898 1.00 79.97 P
ATOM 3 OP1 U A 301 -3.133 146.743 51.098 1.00 79.11 O
ATOM 4 OP2 U A 301 -2.127 146.969 48.740 1.00 79.80 O
ATOM 5 O5' U A 301 -1.205 145.300 50.342 1.00 78.27 O
ATOM 6 C5' U A 301 -1.277 144.283 51.369 1.00 74.90 C
ATOM 7 C4' U A 301 0.095 143.707 51.641 1.00 72.32 C
ATOM 8 O4' U A 301 0.518 142.862 50.538 1.00 71.19 O
ATOM 9 C3' U A 301 1.213 144.726 51.780 1.00 70.94 C
ATOM 10 O3' U A 301 1.245 145.307 53.076 1.00 69.55 O
ATOM 11 C2' U A 301 2.450 143.894 51.471 1.00 70.32 C
ATOM 12 O2' U A 301 2.872 143.108 52.559 1.00 70.49 O
ATOM 13 C1' U A 301 1.923 142.973 50.368 1.00 70.73 C
ATOM 14 N1 U A 301 2.197 143.507 49.027 1.00 71.39 N
ATOM 15 C2 U A 301 3.392 143.159 48.435 1.00 71.15 C
ATOM 16 O2 U A 301 4.195 142.415 48.962 1.00 72.28 O
ATOM 17 N3 U A 301 3.611 143.713 47.200 1.00 71.42 N
ATOM 18 C4 U A 301 2.771 144.558 46.505 1.00 71.68 C
ATOM 19 O4 U A 301 3.118 144.990 45.405 1.00 70.97 O
ATOM 20 C5 U A 301 1.547 144.860 47.175 1.00 72.63 C
ATOM 21 C6 U A 301 1.306 144.337 48.382 1.00 72.63 C
ATOM 22 P G A 302 1.654 146.849 53.241 1.00 68.76 P
ATOM 23 OP1 G A 302 1.609 147.167 54.681 1.00 69.18 O
ATOM 24 OP2 G A 302 0.848 147.649 52.285 1.00 69.85 O
ATOM 25 O5' G A 302 3.175 146.902 52.777 1.00 68.39 O
TER
ATOM 1 O3' C B 299 -5.508 145.545 43.611 1.00 81.26 O
ATOM 2 P U B 300 -4.693 146.483 44.627 1.00 82.95 P
ATOM 3 OP1 U B 300 -5.652 147.397 45.307 1.00 81.82 O
ATOM 4 OP2 U B 300 -3.543 147.051 43.869 1.00 81.97 O
ATOM 5 O5' U B 300 -4.152 145.458 45.721 1.00 83.07 O
ATOM 6 C5' U B 300 -5.075 144.739 46.570 1.00 82.43 C
ATOM 7 C4' U B 300 -4.337 143.738 47.433 1.00 81.59 C
ATOM 8 O4' U B 300 -3.813 142.653 46.619 1.00 81.09 O
ATOM 9 C3' U B 300 -3.122 144.278 48.163 1.00 80.01 C
ATOM 10 O3' U B 300 -3.475 144.969 49.344 1.00 78.49 O
ATOM 11 C2' U B 300 -2.323 143.014 48.430 1.00 80.36 C
ATOM 12 O2' U B 300 -2.848 142.267 49.510 1.00 80.60 O
ATOM 13 C1' U B 300 -2.547 142.251 47.122 1.00 80.20 C
ATOM 14 N1 U B 300 -1.534 142.570 46.103 1.00 79.17 N
ATOM 15 C2 U B 300 -0.406 141.780 46.041 1.00 78.60 C
ATOM 16 O2 U B 300 -0.208 140.844 46.795 1.00 78.89 O
ATOM 17 N3 U B 300 0.488 142.129 45.061 1.00 78.74 N
ATOM 18 C4 U B 300 0.371 143.168 44.158 1.00 78.88 C
ATOM 19 O4 U B 300 1.255 143.348 43.321 1.00 79.13 O
ATOM 20 C5 U B 300 -0.818 143.941 44.294 1.00 78.87 C
ATOM 21 C6 U B 300 -1.706 143.626 45.234 1.00 79.17 C
ATOM 22 P U B 301 -2.504 146.115 49.898 1.00 79.97 P
ATOM 23 OP1 U B 301 -3.133 146.743 51.098 1.00 79.11 O
ATOM 24 OP2 U B 301 -2.127 146.969 48.740 1.00 79.80 O
ATOM 25 O5' U B 301 -1.205 145.300 50.342 1.00 78.27 O
TER
ATOM 2 P U A 301 -2.504 146.115 49.898 1.00 79.97 P
ATOM 3 OP1 U A 301 -3.133 146.743 51.098 1.00 79.11 O
ATOM 4 OP2 U A 301 -2.127 146.969 48.740 1.00 79.80 O
ATOM 5 O5' U A 301 -1.205 145.300 50.342 1.00 78.27 O
ATOM 6 C5' U A 301 -1.277 144.283 51.369 1.00 74.90 C
ATOM 7 C4' U A 301 0.095 143.707 51.641 1.00 72.32 C
ATOM 8 O4' U A 301 0.518 142.862 50.538 1.00 71.19 O
ATOM 9 C3' U A 301 1.213 144.726 51.780 1.00 70.94 C
ATOM 10 O3' U A 301 1.245 145.307 53.076 1.00 69.55 O
ATOM 11 C2' U A 301 2.450 143.894 51.471 1.00 70.32 C
ATOM 12 O2' U A 301 2.872 143.108 52.559 1.00 70.49 O
ATOM 13 C1' U A 301 1.923 142.973 50.368 1.00 70.73 C
ATOM 14 N1 U A 301 2.197 143.507 49.027 1.00 71.39 N
ATOM 15 C2 U A 301 3.392 143.159 48.435 1.00 71.15 C
ATOM 16 O2 U A 301 4.195 142.415 48.962 1.00 72.28 O
ATOM 17 N3 U A 301 3.611 143.713 47.200 1.00 71.42 N
ATOM 18 C4 U A 301 2.771 144.558 46.505 1.00 71.68 C
ATOM 19 O4 U A 301 3.118 144.990 45.405 1.00 70.97 O
ATOM 20 C5 U A 301 1.547 144.860 47.175 1.00 72.63 C
ATOM 21 C6 U A 301 1.306 144.337 48.382 1.00 72.63 C
ATOM 22 P G A 302 1.654 146.849 53.241 1.00 68.76 P
ATOM 23 OP1 G A 302 1.609 147.167 54.681 1.00 69.18 O
ATOM 24 OP2 G A 302 0.848 147.649 52.285 1.00 69.85 O
ATOM 25 O5' G A 302 3.175 146.902 52.777 1.00 68.39 O
TER
ATOM 1 O3' C B 299 -5.508 145.545 43.611 1.00 81.26 O
ATOM 2 P U B 300 -4.693 146.483 44.627 1.00 82.95 P
ATOM 3 OP1 U B 300 -5.652 147.397 45.307 1.00 81.82 O
ATOM 4 OP2 U B 300 -3.543 147.051 43.869 1.00 81.97 O
ATOM 5 O5' U B 300 -4.152 145.458 45.721 1.00 83.07 O
ATOM 6 C5' U B 300 -5.075 144.739 46.570 1.00 82.43 C
ATOM 7 C4' U B 300 -4.337 143.738 47.433 1.00 81.59 C
ATOM 8 O4' U B 300 -3.813 142.653 46.619 1.00 81.09 O
ATOM 9 C3' U B 300 -3.122 144.278 48.163 1.00 80.01 C
ATOM 10 O3' U B 300 -3.475 144.969 49.344 1.00 78.49 O
ATOM 11 C2' U B 300 -2.323 143.014 48.430 1.00 80.36 C
ATOM 12 O2' U B 300 -2.848 142.267 49.510 1.00 80.60 O
ATOM 13 C1' U B 300 -2.547 142.251 47.122 1.00 80.20 C
ATOM 14 N1 U B 300 -1.534 142.570 46.103 1.00 79.17 N
ATOM 15 C2 U B 300 -0.406 141.780 46.041 1.00 78.60 C
ATOM 16 O2 U B 300 -0.208 140.844 46.795 1.00 78.89 O
ATOM 17 N3 U B 300 0.488 142.129 45.061 1.00 78.74 N
ATOM 18 C4 U B 300 0.371 143.168 44.158 1.00 78.88 C
ATOM 19 O4 U B 300 1.255 143.348 43.321 1.00 79.13 O
ATOM 20 C5 U B 300 -0.818 143.941 44.294 1.00 78.87 C
ATOM 21 C6 U B 300 -1.706 143.626 45.234 1.00 79.17 C
ATOM 22 P U B 301 -2.504 146.115 49.898 1.00 79.97 P
ATOM 23 OP1 U B 301 -3.133 146.743 51.098 1.00 79.11 O
ATOM 24 OP2 U B 301 -2.127 146.969 48.740 1.00 79.80 O
ATOM 25 O5' U B 301 -1.205 145.300 50.342 1.00 78.27 O
TER
Atoms:
C4: (2.771,144.558,46.505)
N3: (3.611,143.713,47.200)
OP1: (-3.133,146.743,51.098)
OP2: (-2.127,146.969,48.740)
C2: (3.392,143.159,48.435)
C1': (1.923,142.973,50.368)
C3': (1.213,144.726,51.780)
O5': (-1.205,145.300,50.342)
O4': (0.518,142.862,50.538)
C5': (-1.277,144.283,51.369)
P: (-2.504,146.115,49.898)
C4': (0.095,143.707,51.641)
C2': (2.450,143.894,51.471)
O2': (2.872,143.108,52.559)
N1: (2.197,143.507,49.027)
O4: (3.118,144.990,45.405)
O2: (4.195,142.415,48.962)
C6: (1.306,144.337,48.382)
C5: (1.547,144.860,47.175)
O3': (1.245,145.307,53.076)
N3: (3.611,143.713,47.200)
OP1: (-3.133,146.743,51.098)
OP2: (-2.127,146.969,48.740)
C2: (3.392,143.159,48.435)
C1': (1.923,142.973,50.368)
C3': (1.213,144.726,51.780)
O5': (-1.205,145.300,50.342)
O4': (0.518,142.862,50.538)
C5': (-1.277,144.283,51.369)
P: (-2.504,146.115,49.898)
C4': (0.095,143.707,51.641)
C2': (2.450,143.894,51.471)
O2': (2.872,143.108,52.559)
N1: (2.197,143.507,49.027)
O4: (3.118,144.990,45.405)
O2: (4.195,142.415,48.962)
C6: (1.306,144.337,48.382)
C5: (1.547,144.860,47.175)
O3': (1.245,145.307,53.076)
C4: (0.371,143.168,44.158)
N3: (0.488,142.129,45.061)
OP1: (-5.652,147.397,45.307)
OP2: (-3.543,147.051,43.869)
C2: (-0.406,141.780,46.041)
C1': (-2.547,142.251,47.122)
C3': (-3.122,144.278,48.163)
O5': (-4.152,145.458,45.721)
O4': (-3.813,142.653,46.619)
C5': (-5.075,144.739,46.570)
P: (-4.693,146.483,44.627)
C4': (-4.337,143.738,47.433)
C2': (-2.323,143.014,48.430)
O2': (-2.848,142.267,49.510)
N1: (-1.534,142.570,46.103)
O4: (1.255,143.348,43.321)
O2: (-0.208,140.844,46.795)
C6: (-1.706,143.626,45.234)
C5: (-0.818,143.941,44.294)
O3': (-3.475,144.969,49.344)
N3: (0.488,142.129,45.061)
OP1: (-5.652,147.397,45.307)
OP2: (-3.543,147.051,43.869)
C2: (-0.406,141.780,46.041)
C1': (-2.547,142.251,47.122)
C3': (-3.122,144.278,48.163)
O5': (-4.152,145.458,45.721)
O4': (-3.813,142.653,46.619)
C5': (-5.075,144.739,46.570)
P: (-4.693,146.483,44.627)
C4': (-4.337,143.738,47.433)
C2': (-2.323,143.014,48.430)
O2': (-2.848,142.267,49.510)
N1: (-1.534,142.570,46.103)
O4: (1.255,143.348,43.321)
O2: (-0.208,140.844,46.795)
C6: (-1.706,143.626,45.234)
C5: (-0.818,143.941,44.294)
O3': (-3.475,144.969,49.344)
Image (generated by PyMOL):