ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A385:A384

Extra

PDB:
ATOM 1 O3' U A 384 84.212 88.599 39.296 1.00 71.15 O
ATOM 2 P A A 385 84.109 89.003 37.725 1.00 70.80 P
ATOM 3 OP1 A A 385 84.590 87.836 36.921 1.00 71.75 O
ATOM 4 OP2 A A 385 84.756 90.344 37.497 1.00 70.55 O
ATOM 5 O5' A A 385 82.552 89.174 37.399 1.00 66.35 O
ATOM 6 C5' A A 385 82.141 89.407 36.027 1.00 59.42 C
ATOM 7 C4' A A 385 80.641 89.414 35.888 1.00 54.29 C
ATOM 8 O4' A A 385 80.098 88.106 36.162 1.00 53.79 O
ATOM 9 C3' A A 385 79.839 90.362 36.757 1.00 52.91 C
ATOM 10 O3' A A 385 79.841 91.639 36.130 1.00 50.00 O
ATOM 11 C2' A A 385 78.450 89.739 36.667 1.00 52.94 C
ATOM 12 O2' A A 385 77.844 90.025 35.421 1.00 52.78 O
ATOM 13 C1' A A 385 78.788 88.243 36.677 1.00 52.41 C
ATOM 14 N9 A A 385 78.782 87.617 37.994 1.00 51.06 N
ATOM 15 C8 A A 385 79.249 88.107 39.197 1.00 50.71 C
ATOM 16 N7 A A 385 79.138 87.258 40.185 1.00 50.94 N
ATOM 17 C5 A A 385 78.550 86.143 39.599 1.00 50.66 C
ATOM 18 C6 A A 385 78.174 84.903 40.115 1.00 50.85 C
ATOM 19 N6 A A 385 78.352 84.550 41.390 1.00 49.98 N
ATOM 20 N1 A A 385 77.608 84.019 39.270 1.00 52.20 N
ATOM 21 C2 A A 385 77.443 84.370 37.986 1.00 51.74 C
ATOM 22 N3 A A 385 77.761 85.509 37.380 1.00 50.35 N
ATOM 23 C4 A A 385 78.317 86.359 38.255 1.00 50.00 C
ATOM 24 P U A 386 80.183 92.970 36.972 1.00 46.77 P
ATOM 25 OP1 U A 386 81.656 93.175 36.938 1.00 45.98 O
ATOM 26 OP2 U A 386 79.480 92.905 38.272 1.00 46.50 O
ATOM 27 O5' U A 386 79.487 94.118 36.121 1.00 43.98 O
TER

ATOM 1 O3' A B 383 79.684 87.742 44.392 1.00 55.07 O
ATOM 2 P U B 384 80.782 86.679 43.892 1.00 59.19 P
ATOM 3 OP1 U B 384 80.039 85.451 43.489 1.00 58.99 O
ATOM 4 OP2 U B 384 81.857 86.606 44.934 1.00 58.77 O
ATOM 5 O5' U B 384 81.370 87.315 42.548 1.00 62.54 O
ATOM 6 C5' U B 384 82.515 88.198 42.590 1.00 68.45 C
ATOM 7 C4' U B 384 83.492 87.874 41.475 1.00 71.44 C
ATOM 8 O4' U B 384 83.785 86.437 41.508 1.00 74.74 O
ATOM 9 C3' U B 384 83.048 88.192 40.040 1.00 72.25 C
ATOM 10 O3' U B 384 84.212 88.599 39.296 1.00 71.15 O
ATOM 11 C2' U B 384 82.501 86.846 39.576 1.00 75.01 C
ATOM 12 O2' U B 384 82.449 86.687 38.174 1.00 76.47 O
ATOM 13 C1' U B 384 83.493 85.877 40.233 1.00 77.21 C
ATOM 14 N1 U B 384 83.014 84.480 40.370 1.00 80.98 N
ATOM 15 C2 U B 384 83.966 83.454 40.522 1.00 82.98 C
ATOM 16 O2 U B 384 85.155 83.661 40.640 1.00 83.66 O
ATOM 17 N3 U B 384 83.460 82.173 40.531 1.00 84.90 N
ATOM 18 C4 U B 384 82.132 81.804 40.432 1.00 85.68 C
ATOM 19 O4 U B 384 81.834 80.605 40.415 1.00 87.10 O
ATOM 20 C5 U B 384 81.210 82.906 40.323 1.00 84.76 C
ATOM 21 C6 U B 384 81.667 84.170 40.301 1.00 82.71 C
ATOM 22 P A B 385 84.109 89.003 37.725 1.00 70.80 P
ATOM 23 OP1 A B 385 84.590 87.836 36.921 1.00 71.75 O
ATOM 24 OP2 A B 385 84.756 90.344 37.497 1.00 70.55 O
ATOM 25 O5' A B 385 82.552 89.174 37.399 1.00 66.35 O
TER

Atoms:
OP1: (84.590,87.836,36.921)
OP2: (84.756,90.344,37.497)
C3': (79.839,90.362,36.757)
C1': (78.788,88.243,36.677)
C5': (82.141,89.407,36.027)
O4': (80.098,88.106,36.162)
C8: (79.249,88.107,39.197)
O2': (77.844,90.025,35.421)
C6: (78.174,84.903,40.115)
C5: (78.550,86.143,39.599)
C4: (78.317,86.359,38.255)
P: (84.109,89.003,37.725)
C4': (80.641,89.414,35.888)
C2': (78.450,89.739,36.667)
C2: (77.443,84.370,37.986)
N1: (77.608,84.019,39.270)
N3: (77.761,85.509,37.380)
N6: (78.352,84.550,41.390)
N7: (79.138,87.258,40.185)
N9: (78.782,87.617,37.994)
O5': (82.552,89.174,37.399)
O3': (79.841,91.639,36.130)
C4: (82.132,81.804,40.432)
N3: (83.460,82.173,40.531)
OP1: (80.039,85.451,43.489)
OP2: (81.857,86.606,44.934)
C2: (83.966,83.454,40.522)
C1': (83.493,85.877,40.233)
C3': (83.048,88.192,40.040)
O5': (81.370,87.315,42.548)
O4': (83.785,86.437,41.508)
C5': (82.515,88.198,42.590)
P: (80.782,86.679,43.892)
C4': (83.492,87.874,41.475)
C2': (82.501,86.846,39.576)
O2': (82.449,86.687,38.174)
N1: (83.014,84.480,40.370)
O4: (81.834,80.605,40.415)
O2: (85.155,83.661,40.640)
C6: (81.667,84.170,40.301)
C5: (81.210,82.906,40.323)
O3': (84.212,88.599,39.296)
Image (generated by PyMOL):
PyMOL image
show in jmol