ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A385:A384

Extra

PDB:
ATOM 1 O3' U A 384 83.795 88.499 38.533 1.00 46.49 O
ATOM 2 P A A 385 83.631 89.021 37.012 1.00 46.50 P
ATOM 3 OP1 A A 385 84.053 87.894 36.136 1.00 46.70 O
ATOM 4 OP2 A A 385 84.330 90.339 36.897 1.00 45.60 O
ATOM 5 O5' A A 385 82.077 89.246 36.725 1.00 40.75 O
ATOM 6 C5' A A 385 81.659 89.547 35.369 1.00 38.78 C
ATOM 7 C4' A A 385 80.156 89.494 35.214 1.00 35.88 C
ATOM 8 O4' A A 385 79.655 88.184 35.561 1.00 36.83 O
ATOM 9 C3' A A 385 79.324 90.440 36.051 1.00 35.20 C
ATOM 10 O3' A A 385 79.314 91.719 35.432 1.00 33.10 O
ATOM 11 C2' A A 385 77.948 89.783 36.004 1.00 34.12 C
ATOM 12 O2' A A 385 77.264 90.038 34.798 1.00 34.95 O
ATOM 13 C1' A A 385 78.321 88.300 36.027 1.00 35.57 C
ATOM 14 N9 A A 385 78.255 87.677 37.340 1.00 35.93 N
ATOM 15 C8 A A 385 78.648 88.188 38.553 1.00 36.93 C
ATOM 16 N7 A A 385 78.499 87.354 39.550 1.00 39.22 N
ATOM 17 C5 A A 385 77.966 86.217 38.953 1.00 39.63 C
ATOM 18 C6 A A 385 77.596 84.959 39.466 1.00 39.56 C
ATOM 19 N6 A A 385 77.757 84.616 40.745 1.00 38.51 N
ATOM 20 N1 A A 385 77.072 84.055 38.605 1.00 38.45 N
ATOM 21 C2 A A 385 76.962 84.391 37.314 1.00 38.84 C
ATOM 22 N3 A A 385 77.298 85.532 36.705 1.00 38.67 N
ATOM 23 C4 A A 385 77.796 86.412 37.593 1.00 37.99 C
ATOM 24 P U A 386 79.641 93.023 36.305 1.00 33.85 P
ATOM 25 OP1 U A 386 81.114 93.227 36.318 1.00 30.99 O
ATOM 26 OP2 U A 386 78.912 92.870 37.590 1.00 32.51 O
ATOM 27 O5' U A 386 78.956 94.189 35.477 1.00 29.31 O
TER

ATOM 1 O3' A B 383 79.240 87.938 43.639 1.00 33.38 O
ATOM 2 P U B 384 80.379 86.980 43.044 1.00 34.92 P
ATOM 3 OP1 U B 384 79.747 85.736 42.564 1.00 36.08 O
ATOM 4 OP2 U B 384 81.465 86.915 44.060 1.00 34.48 O
ATOM 5 O5' U B 384 80.930 87.741 41.764 1.00 36.73 O
ATOM 6 C5' U B 384 82.193 88.416 41.824 1.00 42.69 C
ATOM 7 C4' U B 384 83.116 87.910 40.748 1.00 44.77 C
ATOM 8 O4' U B 384 83.304 86.468 40.897 1.00 45.23 O
ATOM 9 C3' U B 384 82.660 88.151 39.310 1.00 46.49 C
ATOM 10 O3' U B 384 83.795 88.499 38.533 1.00 46.49 O
ATOM 11 C2' U B 384 82.148 86.783 38.893 1.00 48.52 C
ATOM 12 O2' U B 384 82.248 86.580 37.500 1.00 51.03 O
ATOM 13 C1' U B 384 83.099 85.855 39.651 1.00 47.50 C
ATOM 14 N1 U B 384 82.599 84.479 39.833 1.00 48.21 N
ATOM 15 C2 U B 384 83.531 83.469 39.973 1.00 48.15 C
ATOM 16 O2 U B 384 84.718 83.676 40.118 1.00 48.62 O
ATOM 17 N3 U B 384 83.017 82.200 39.948 1.00 48.36 N
ATOM 18 C4 U B 384 81.691 81.842 39.834 1.00 49.19 C
ATOM 19 O4 U B 384 81.405 80.668 39.614 1.00 50.96 O
ATOM 20 C5 U B 384 80.780 82.940 39.793 1.00 49.36 C
ATOM 21 C6 U B 384 81.248 84.188 39.797 1.00 48.91 C
ATOM 22 P A B 385 83.631 89.021 37.012 1.00 46.50 P
ATOM 23 OP1 A B 385 84.053 87.894 36.136 1.00 46.70 O
ATOM 24 OP2 A B 385 84.330 90.339 36.897 1.00 45.60 O
ATOM 25 O5' A B 385 82.077 89.246 36.725 1.00 40.75 O
TER

Atoms:
OP1: (84.053,87.894,36.136)
OP2: (84.330,90.339,36.897)
C3': (79.324,90.440,36.051)
C1': (78.321,88.300,36.027)
C5': (81.659,89.547,35.369)
O4': (79.655,88.184,35.561)
C8: (78.648,88.188,38.553)
O2': (77.264,90.038,34.798)
C6: (77.596,84.959,39.466)
C5: (77.966,86.217,38.953)
C4: (77.796,86.412,37.593)
P: (83.631,89.021,37.012)
C4': (80.156,89.494,35.214)
C2': (77.948,89.783,36.004)
C2: (76.962,84.391,37.314)
N1: (77.072,84.055,38.605)
N3: (77.298,85.532,36.705)
N6: (77.757,84.616,40.745)
N7: (78.499,87.354,39.550)
N9: (78.255,87.677,37.340)
O5': (82.077,89.246,36.725)
O3': (79.314,91.719,35.432)
C4: (81.691,81.842,39.834)
N3: (83.017,82.200,39.948)
OP1: (79.747,85.736,42.564)
OP2: (81.465,86.915,44.060)
C2: (83.531,83.469,39.973)
C1': (83.099,85.855,39.651)
C3': (82.660,88.151,39.310)
O5': (80.930,87.741,41.764)
O4': (83.304,86.468,40.897)
C5': (82.193,88.416,41.824)
P: (80.379,86.980,43.044)
C4': (83.116,87.910,40.748)
C2': (82.148,86.783,38.893)
O2': (82.248,86.580,37.500)
N1: (82.599,84.479,39.833)
O4: (81.405,80.668,39.614)
O2: (84.718,83.676,40.118)
C6: (81.248,84.188,39.797)
C5: (80.780,82.940,39.793)
O3': (83.795,88.499,38.533)
Image (generated by PyMOL):
PyMOL image
show in jmol