Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PF4:R4:R3
Extra
PDB:
ATOM 1 O3' U A 3 -3.868 12.580 14.229 1.00 45.78 O
ATOM 2 P U A 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 3 OP1 U A 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 4 OP2 U A 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 5 O5' U A 4 -2.864 10.724 12.932 1.00 61.59 O
ATOM 6 C5' U A 4 -2.469 9.352 12.925 1.00 69.19 C
ATOM 7 C4' U A 4 -1.285 9.083 13.841 1.00 73.29 C
ATOM 8 O4' U A 4 -1.717 9.137 15.221 1.00 75.06 O
ATOM 9 C3' U A 4 -0.692 7.689 13.660 1.00 75.21 C
ATOM 10 O3' U A 4 0.360 7.700 12.697 1.00 75.33 O
ATOM 11 C2' U A 4 -0.236 7.274 15.066 1.00 76.33 C
ATOM 12 O2' U A 4 1.173 7.227 15.242 1.00 75.15 O
ATOM 13 C1' U A 4 -0.855 8.323 15.997 1.00 77.05 C
ATOM 14 N1 U A 4 -1.604 7.778 17.204 1.00 78.92 N
ATOM 15 C2 U A 4 -1.023 6.793 18.001 1.00 79.95 C
ATOM 16 O2 U A 4 0.075 6.297 17.800 1.00 80.12 O
ATOM 17 N3 U A 4 -1.781 6.383 19.073 1.00 80.69 N
ATOM 18 C4 U A 4 -3.031 6.853 19.430 1.00 81.23 C
ATOM 19 O4 U A 4 -3.583 6.389 20.418 1.00 82.75 O
ATOM 20 C5 U A 4 -3.576 7.875 18.572 1.00 81.02 C
ATOM 21 C6 U A 4 -2.857 8.291 17.519 1.00 80.23 C
TER
ATOM 1 O3' U B 2 -4.965 12.614 20.368 1.00 27.38 O
ATOM 2 P U B 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 3 OP1 U B 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 4 OP2 U B 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 5 O5' U B 3 -4.891 12.075 17.836 1.00 33.45 O
ATOM 6 C5' U B 3 -4.969 13.322 17.136 1.00 34.55 C
ATOM 7 C4' U B 3 -3.676 13.611 16.399 1.00 35.44 C
ATOM 8 O4' U B 3 -2.582 13.752 17.335 1.00 30.52 O
ATOM 9 C3' U B 3 -3.223 12.473 15.493 1.00 39.80 C
ATOM 10 O3' U B 3 -3.868 12.580 14.229 1.00 45.78 O
ATOM 11 C2' U B 3 -1.708 12.652 15.410 1.00 34.98 C
ATOM 12 O2' U B 3 -1.263 13.689 14.548 1.00 34.42 O
ATOM 13 C1' U B 3 -1.448 13.006 16.871 1.00 31.27 C
ATOM 14 N1 U B 3 -1.116 11.857 17.799 1.00 26.10 N
ATOM 15 C2 U B 3 0.080 11.181 17.557 1.00 26.65 C
ATOM 16 O2 U B 3 0.795 11.483 16.599 1.00 28.60 O
ATOM 17 N3 U B 3 0.389 10.135 18.426 1.00 23.54 N
ATOM 18 C4 U B 3 -0.367 9.791 19.538 1.00 22.44 C
ATOM 19 O4 U B 3 0.005 8.888 20.273 1.00 25.88 O
ATOM 20 C5 U B 3 -1.581 10.543 19.762 1.00 23.32 C
ATOM 21 C6 U B 3 -1.920 11.523 18.897 1.00 23.97 C
ATOM 22 P U B 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 23 OP1 U B 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 24 OP2 U B 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 25 O5' U B 4 -2.864 10.724 12.932 1.00 61.59 O
TER
ATOM 2 P U A 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 3 OP1 U A 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 4 OP2 U A 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 5 O5' U A 4 -2.864 10.724 12.932 1.00 61.59 O
ATOM 6 C5' U A 4 -2.469 9.352 12.925 1.00 69.19 C
ATOM 7 C4' U A 4 -1.285 9.083 13.841 1.00 73.29 C
ATOM 8 O4' U A 4 -1.717 9.137 15.221 1.00 75.06 O
ATOM 9 C3' U A 4 -0.692 7.689 13.660 1.00 75.21 C
ATOM 10 O3' U A 4 0.360 7.700 12.697 1.00 75.33 O
ATOM 11 C2' U A 4 -0.236 7.274 15.066 1.00 76.33 C
ATOM 12 O2' U A 4 1.173 7.227 15.242 1.00 75.15 O
ATOM 13 C1' U A 4 -0.855 8.323 15.997 1.00 77.05 C
ATOM 14 N1 U A 4 -1.604 7.778 17.204 1.00 78.92 N
ATOM 15 C2 U A 4 -1.023 6.793 18.001 1.00 79.95 C
ATOM 16 O2 U A 4 0.075 6.297 17.800 1.00 80.12 O
ATOM 17 N3 U A 4 -1.781 6.383 19.073 1.00 80.69 N
ATOM 18 C4 U A 4 -3.031 6.853 19.430 1.00 81.23 C
ATOM 19 O4 U A 4 -3.583 6.389 20.418 1.00 82.75 O
ATOM 20 C5 U A 4 -3.576 7.875 18.572 1.00 81.02 C
ATOM 21 C6 U A 4 -2.857 8.291 17.519 1.00 80.23 C
TER
ATOM 1 O3' U B 2 -4.965 12.614 20.368 1.00 27.38 O
ATOM 2 P U B 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 3 OP1 U B 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 4 OP2 U B 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 5 O5' U B 3 -4.891 12.075 17.836 1.00 33.45 O
ATOM 6 C5' U B 3 -4.969 13.322 17.136 1.00 34.55 C
ATOM 7 C4' U B 3 -3.676 13.611 16.399 1.00 35.44 C
ATOM 8 O4' U B 3 -2.582 13.752 17.335 1.00 30.52 O
ATOM 9 C3' U B 3 -3.223 12.473 15.493 1.00 39.80 C
ATOM 10 O3' U B 3 -3.868 12.580 14.229 1.00 45.78 O
ATOM 11 C2' U B 3 -1.708 12.652 15.410 1.00 34.98 C
ATOM 12 O2' U B 3 -1.263 13.689 14.548 1.00 34.42 O
ATOM 13 C1' U B 3 -1.448 13.006 16.871 1.00 31.27 C
ATOM 14 N1 U B 3 -1.116 11.857 17.799 1.00 26.10 N
ATOM 15 C2 U B 3 0.080 11.181 17.557 1.00 26.65 C
ATOM 16 O2 U B 3 0.795 11.483 16.599 1.00 28.60 O
ATOM 17 N3 U B 3 0.389 10.135 18.426 1.00 23.54 N
ATOM 18 C4 U B 3 -0.367 9.791 19.538 1.00 22.44 C
ATOM 19 O4 U B 3 0.005 8.888 20.273 1.00 25.88 O
ATOM 20 C5 U B 3 -1.581 10.543 19.762 1.00 23.32 C
ATOM 21 C6 U B 3 -1.920 11.523 18.897 1.00 23.97 C
ATOM 22 P U B 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 23 OP1 U B 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 24 OP2 U B 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 25 O5' U B 4 -2.864 10.724 12.932 1.00 61.59 O
TER
Atoms:
C4: (-3.031,6.853,19.430)
N3: (-1.781,6.383,19.073)
OP1: (-5.112,11.685,12.287)
OP2: (-4.830,10.240,14.448)
C2: (-1.023,6.793,18.001)
C1': (-0.855,8.323,15.997)
C3': (-0.692,7.689,13.660)
O5': (-2.864,10.724,12.932)
O4': (-1.717,9.137,15.221)
C5': (-2.469,9.352,12.925)
P: (-4.305,11.238,13.460)
C4': (-1.285,9.083,13.841)
C2': (-0.236,7.274,15.066)
O2': (1.173,7.227,15.242)
N1: (-1.604,7.778,17.204)
O4: (-3.583,6.389,20.418)
O2: (0.075,6.297,17.800)
C6: (-2.857,8.291,17.519)
C5: (-3.576,7.875,18.572)
O3': (0.360,7.700,12.697)
N3: (-1.781,6.383,19.073)
OP1: (-5.112,11.685,12.287)
OP2: (-4.830,10.240,14.448)
C2: (-1.023,6.793,18.001)
C1': (-0.855,8.323,15.997)
C3': (-0.692,7.689,13.660)
O5': (-2.864,10.724,12.932)
O4': (-1.717,9.137,15.221)
C5': (-2.469,9.352,12.925)
P: (-4.305,11.238,13.460)
C4': (-1.285,9.083,13.841)
C2': (-0.236,7.274,15.066)
O2': (1.173,7.227,15.242)
N1: (-1.604,7.778,17.204)
O4: (-3.583,6.389,20.418)
O2: (0.075,6.297,17.800)
C6: (-2.857,8.291,17.519)
C5: (-3.576,7.875,18.572)
O3': (0.360,7.700,12.697)
C4: (-0.367,9.791,19.538)
N3: (0.389,10.135,18.426)
OP1: (-7.102,12.376,19.024)
OP2: (-5.570,10.432,19.611)
C2: (0.080,11.181,17.557)
C1': (-1.448,13.006,16.871)
C3': (-3.223,12.473,15.493)
O5': (-4.891,12.075,17.836)
O4': (-2.582,13.752,17.335)
C5': (-4.969,13.322,17.136)
P: (-5.750,11.815,19.185)
C4': (-3.676,13.611,16.399)
C2': (-1.708,12.652,15.410)
O2': (-1.263,13.689,14.548)
N1: (-1.116,11.857,17.799)
O4: (0.005,8.888,20.273)
O2: (0.795,11.483,16.599)
C6: (-1.920,11.523,18.897)
C5: (-1.581,10.543,19.762)
O3': (-3.868,12.580,14.229)
N3: (0.389,10.135,18.426)
OP1: (-7.102,12.376,19.024)
OP2: (-5.570,10.432,19.611)
C2: (0.080,11.181,17.557)
C1': (-1.448,13.006,16.871)
C3': (-3.223,12.473,15.493)
O5': (-4.891,12.075,17.836)
O4': (-2.582,13.752,17.335)
C5': (-4.969,13.322,17.136)
P: (-5.750,11.815,19.185)
C4': (-3.676,13.611,16.399)
C2': (-1.708,12.652,15.410)
O2': (-1.263,13.689,14.548)
N1: (-1.116,11.857,17.799)
O4: (0.005,8.888,20.273)
O2: (0.795,11.483,16.599)
C6: (-1.920,11.523,18.897)
C5: (-1.581,10.543,19.762)
O3': (-3.868,12.580,14.229)
Image (generated by PyMOL):