Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1962:A1827
Extra
PDB:
ATOM 1 O3' A A1961 -30.430 125.486 117.248 1.00 0.01 O
ATOM 2 P A A1962 -30.290 127.019 116.790 1.00 9.01 P
ATOM 3 OP1 A A1962 -30.874 127.877 117.885 1.00 9.01 O
ATOM 4 OP2 A A1962 -30.855 127.110 115.436 1.00 9.01 O
ATOM 5 O5' A A1962 -28.714 127.214 116.727 1.00 9.01 O
ATOM 6 C5' A A1962 -28.105 128.377 117.253 1.00 9.01 C
ATOM 7 C4' A A1962 -27.657 128.178 118.670 1.00 9.01 C
ATOM 8 O4' A A1962 -26.741 127.051 118.730 1.00 9.01 O
ATOM 9 C3' A A1962 -26.924 129.352 119.248 1.00 9.01 C
ATOM 10 O3' A A1962 -27.237 129.480 120.642 1.00 9.01 O
ATOM 11 C2' A A1962 -25.441 129.013 118.997 1.00 9.01 C
ATOM 12 O2' A A1962 -24.542 129.556 119.936 1.00 9.01 O
ATOM 13 C1' A A1962 -25.418 127.485 119.011 1.00 9.01 C
ATOM 14 N9 A A1962 -24.533 126.880 117.988 1.00 9.24 N
ATOM 15 C8 A A1962 -25.055 126.326 116.835 1.00 9.24 C
ATOM 16 N7 A A1962 -24.195 125.797 116.008 1.00 9.24 N
ATOM 17 C5 A A1962 -22.991 125.988 116.646 1.00 9.24 C
ATOM 18 C6 A A1962 -21.704 125.612 116.248 1.00 9.24 C
ATOM 19 N6 A A1962 -21.509 124.976 115.097 1.00 9.24 N
ATOM 20 N1 A A1962 -20.656 125.903 117.046 1.00 9.24 N
ATOM 21 C2 A A1962 -20.952 126.539 118.178 1.00 9.24 C
ATOM 22 N3 A A1962 -22.133 126.938 118.652 1.00 9.24 N
ATOM 23 C4 A A1962 -23.159 126.638 117.855 1.00 9.24 C
ATOM 24 P U A1963 -28.442 130.448 121.056 1.00 33.09 P
ATOM 25 OP1 U A1963 -29.219 130.678 119.838 1.00 33.09 O
ATOM 26 OP2 U A1963 -27.848 131.606 121.732 1.00 33.09 O
ATOM 27 O5' U A1963 -29.324 129.596 122.088 1.00 33.09 O
TER
ATOM 1 O3' C B1826 -26.711 120.044 108.386 1.00 0.56 O
ATOM 2 P U B1827 -26.747 121.500 107.736 1.00 6.61 P
ATOM 3 OP1 U B1827 -27.704 121.453 106.615 1.00 6.62 O
ATOM 4 OP2 U B1827 -25.326 121.879 107.465 1.00 6.62 O
ATOM 5 O5' U B1827 -27.357 122.406 108.886 1.00 6.62 O
ATOM 6 C5' U B1827 -28.746 122.392 109.151 1.00 6.62 C
ATOM 7 C4' U B1827 -29.016 122.839 110.550 1.00 6.61 C
ATOM 8 O4' U B1827 -28.033 122.259 111.425 1.00 6.62 O
ATOM 9 C3' U B1827 -28.886 124.321 110.791 1.00 6.62 C
ATOM 10 O3' U B1827 -30.050 125.011 110.448 1.00 6.62 O
ATOM 11 C2' U B1827 -28.569 124.402 112.265 1.00 6.62 C
ATOM 12 O2' U B1827 -29.755 124.292 113.049 1.00 6.62 O
ATOM 13 C1' U B1827 -27.730 123.149 112.465 1.00 6.62 C
ATOM 14 N1 U B1827 -26.288 123.430 112.441 1.00 6.81 N
ATOM 15 C2 U B1827 -25.798 124.323 113.347 1.00 6.81 C
ATOM 16 O2 U B1827 -26.486 124.907 114.131 1.00 6.81 O
ATOM 17 N3 U B1827 -24.472 124.553 113.330 1.00 6.81 N
ATOM 18 C4 U B1827 -23.564 123.977 112.508 1.00 6.81 C
ATOM 19 O4 U B1827 -22.376 124.295 112.629 1.00 6.81 O
ATOM 20 C5 U B1827 -24.135 123.039 111.589 1.00 6.81 C
ATOM 21 C6 U B1827 -25.447 122.801 111.590 1.00 6.81 C
ATOM 22 P G B1828 -30.027 126.113 109.285 1.00 0.91 P
ATOM 23 OP1 G B1828 -28.903 125.761 108.375 1.00 0.91 O
ATOM 24 OP2 G B1828 -30.029 127.453 109.959 1.00 0.91 O
ATOM 25 O5' G B1828 -31.418 125.854 108.538 1.00 0.91 O
TER
ATOM 2 P A A1962 -30.290 127.019 116.790 1.00 9.01 P
ATOM 3 OP1 A A1962 -30.874 127.877 117.885 1.00 9.01 O
ATOM 4 OP2 A A1962 -30.855 127.110 115.436 1.00 9.01 O
ATOM 5 O5' A A1962 -28.714 127.214 116.727 1.00 9.01 O
ATOM 6 C5' A A1962 -28.105 128.377 117.253 1.00 9.01 C
ATOM 7 C4' A A1962 -27.657 128.178 118.670 1.00 9.01 C
ATOM 8 O4' A A1962 -26.741 127.051 118.730 1.00 9.01 O
ATOM 9 C3' A A1962 -26.924 129.352 119.248 1.00 9.01 C
ATOM 10 O3' A A1962 -27.237 129.480 120.642 1.00 9.01 O
ATOM 11 C2' A A1962 -25.441 129.013 118.997 1.00 9.01 C
ATOM 12 O2' A A1962 -24.542 129.556 119.936 1.00 9.01 O
ATOM 13 C1' A A1962 -25.418 127.485 119.011 1.00 9.01 C
ATOM 14 N9 A A1962 -24.533 126.880 117.988 1.00 9.24 N
ATOM 15 C8 A A1962 -25.055 126.326 116.835 1.00 9.24 C
ATOM 16 N7 A A1962 -24.195 125.797 116.008 1.00 9.24 N
ATOM 17 C5 A A1962 -22.991 125.988 116.646 1.00 9.24 C
ATOM 18 C6 A A1962 -21.704 125.612 116.248 1.00 9.24 C
ATOM 19 N6 A A1962 -21.509 124.976 115.097 1.00 9.24 N
ATOM 20 N1 A A1962 -20.656 125.903 117.046 1.00 9.24 N
ATOM 21 C2 A A1962 -20.952 126.539 118.178 1.00 9.24 C
ATOM 22 N3 A A1962 -22.133 126.938 118.652 1.00 9.24 N
ATOM 23 C4 A A1962 -23.159 126.638 117.855 1.00 9.24 C
ATOM 24 P U A1963 -28.442 130.448 121.056 1.00 33.09 P
ATOM 25 OP1 U A1963 -29.219 130.678 119.838 1.00 33.09 O
ATOM 26 OP2 U A1963 -27.848 131.606 121.732 1.00 33.09 O
ATOM 27 O5' U A1963 -29.324 129.596 122.088 1.00 33.09 O
TER
ATOM 1 O3' C B1826 -26.711 120.044 108.386 1.00 0.56 O
ATOM 2 P U B1827 -26.747 121.500 107.736 1.00 6.61 P
ATOM 3 OP1 U B1827 -27.704 121.453 106.615 1.00 6.62 O
ATOM 4 OP2 U B1827 -25.326 121.879 107.465 1.00 6.62 O
ATOM 5 O5' U B1827 -27.357 122.406 108.886 1.00 6.62 O
ATOM 6 C5' U B1827 -28.746 122.392 109.151 1.00 6.62 C
ATOM 7 C4' U B1827 -29.016 122.839 110.550 1.00 6.61 C
ATOM 8 O4' U B1827 -28.033 122.259 111.425 1.00 6.62 O
ATOM 9 C3' U B1827 -28.886 124.321 110.791 1.00 6.62 C
ATOM 10 O3' U B1827 -30.050 125.011 110.448 1.00 6.62 O
ATOM 11 C2' U B1827 -28.569 124.402 112.265 1.00 6.62 C
ATOM 12 O2' U B1827 -29.755 124.292 113.049 1.00 6.62 O
ATOM 13 C1' U B1827 -27.730 123.149 112.465 1.00 6.62 C
ATOM 14 N1 U B1827 -26.288 123.430 112.441 1.00 6.81 N
ATOM 15 C2 U B1827 -25.798 124.323 113.347 1.00 6.81 C
ATOM 16 O2 U B1827 -26.486 124.907 114.131 1.00 6.81 O
ATOM 17 N3 U B1827 -24.472 124.553 113.330 1.00 6.81 N
ATOM 18 C4 U B1827 -23.564 123.977 112.508 1.00 6.81 C
ATOM 19 O4 U B1827 -22.376 124.295 112.629 1.00 6.81 O
ATOM 20 C5 U B1827 -24.135 123.039 111.589 1.00 6.81 C
ATOM 21 C6 U B1827 -25.447 122.801 111.590 1.00 6.81 C
ATOM 22 P G B1828 -30.027 126.113 109.285 1.00 0.91 P
ATOM 23 OP1 G B1828 -28.903 125.761 108.375 1.00 0.91 O
ATOM 24 OP2 G B1828 -30.029 127.453 109.959 1.00 0.91 O
ATOM 25 O5' G B1828 -31.418 125.854 108.538 1.00 0.91 O
TER
Atoms:
OP1: (-30.874,127.877,117.885)
OP2: (-30.855,127.110,115.436)
C3': (-26.924,129.352,119.248)
C1': (-25.418,127.485,119.011)
C5': (-28.105,128.377,117.253)
O4': (-26.741,127.051,118.730)
C8: (-25.055,126.326,116.835)
O2': (-24.542,129.556,119.936)
C6: (-21.704,125.612,116.248)
C5: (-22.991,125.988,116.646)
C4: (-23.159,126.638,117.855)
P: (-30.290,127.019,116.790)
C4': (-27.657,128.178,118.670)
C2': (-25.441,129.013,118.997)
C2: (-20.952,126.539,118.178)
N1: (-20.656,125.903,117.046)
N3: (-22.133,126.938,118.652)
N6: (-21.509,124.976,115.097)
N7: (-24.195,125.797,116.008)
N9: (-24.533,126.880,117.988)
O5': (-28.714,127.214,116.727)
O3': (-27.237,129.480,120.642)
OP2: (-30.855,127.110,115.436)
C3': (-26.924,129.352,119.248)
C1': (-25.418,127.485,119.011)
C5': (-28.105,128.377,117.253)
O4': (-26.741,127.051,118.730)
C8: (-25.055,126.326,116.835)
O2': (-24.542,129.556,119.936)
C6: (-21.704,125.612,116.248)
C5: (-22.991,125.988,116.646)
C4: (-23.159,126.638,117.855)
P: (-30.290,127.019,116.790)
C4': (-27.657,128.178,118.670)
C2': (-25.441,129.013,118.997)
C2: (-20.952,126.539,118.178)
N1: (-20.656,125.903,117.046)
N3: (-22.133,126.938,118.652)
N6: (-21.509,124.976,115.097)
N7: (-24.195,125.797,116.008)
N9: (-24.533,126.880,117.988)
O5': (-28.714,127.214,116.727)
O3': (-27.237,129.480,120.642)
C4: (-23.564,123.977,112.508)
N3: (-24.472,124.553,113.330)
OP1: (-27.704,121.453,106.615)
OP2: (-25.326,121.879,107.465)
C2: (-25.798,124.323,113.347)
C1': (-27.730,123.149,112.465)
C3': (-28.886,124.321,110.791)
O5': (-27.357,122.406,108.886)
O4': (-28.033,122.259,111.425)
C5': (-28.746,122.392,109.151)
P: (-26.747,121.500,107.736)
C4': (-29.016,122.839,110.550)
C2': (-28.569,124.402,112.265)
O2': (-29.755,124.292,113.049)
N1: (-26.288,123.430,112.441)
O4: (-22.376,124.295,112.629)
O2: (-26.486,124.907,114.131)
C6: (-25.447,122.801,111.590)
C5: (-24.135,123.039,111.589)
O3': (-30.050,125.011,110.448)
N3: (-24.472,124.553,113.330)
OP1: (-27.704,121.453,106.615)
OP2: (-25.326,121.879,107.465)
C2: (-25.798,124.323,113.347)
C1': (-27.730,123.149,112.465)
C3': (-28.886,124.321,110.791)
O5': (-27.357,122.406,108.886)
O4': (-28.033,122.259,111.425)
C5': (-28.746,122.392,109.151)
P: (-26.747,121.500,107.736)
C4': (-29.016,122.839,110.550)
C2': (-28.569,124.402,112.265)
O2': (-29.755,124.292,113.049)
N1: (-26.288,123.430,112.441)
O4: (-22.376,124.295,112.629)
O2: (-26.486,124.907,114.131)
C6: (-25.447,122.801,111.590)
C5: (-24.135,123.039,111.589)
O3': (-30.050,125.011,110.448)
Image (generated by PyMOL):