Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD1:A76:A75
Extra
PDB:
ATOM 1 O3' U A 75 3.644 -20.894 7.247 1.00 47.48 O
ATOM 2 P U A 76 3.689 -22.200 8.182 1.00 44.33 P
ATOM 3 OP1 U A 76 4.887 -22.979 7.786 1.00 53.44 O
ATOM 4 OP2 U A 76 2.354 -22.849 8.097 1.00 35.20 O
ATOM 5 O5' U A 76 3.900 -21.584 9.634 1.00 35.78 O
ATOM 6 C5' U A 76 5.000 -20.731 9.906 1.00 35.54 C
ATOM 7 C4' U A 76 4.869 -20.067 11.254 1.00 37.19 C
ATOM 8 O4' U A 76 3.748 -19.142 11.252 1.00 38.13 O
ATOM 9 C3' U A 76 4.565 -20.979 12.427 1.00 37.82 C
ATOM 10 O3' U A 76 5.688 -21.711 12.879 1.00 38.73 O
ATOM 11 C2' U A 76 4.016 -19.997 13.451 1.00 37.52 C
ATOM 12 O2' U A 76 5.065 -19.229 14.022 1.00 36.32 O
ATOM 13 C1' U A 76 3.183 -19.083 12.550 1.00 36.18 C
ATOM 14 N1 U A 76 1.779 -19.535 12.480 1.00 32.88 N
ATOM 15 C2 U A 76 0.988 -19.227 13.570 1.00 32.25 C
ATOM 16 O2 U A 76 1.400 -18.593 14.527 1.00 27.45 O
ATOM 17 N3 U A 76 -0.303 -19.678 13.494 1.00 29.89 N
ATOM 18 C4 U A 76 -0.864 -20.403 12.464 1.00 32.37 C
ATOM 19 O4 U A 76 -2.043 -20.741 12.550 1.00 33.05 O
ATOM 20 C5 U A 76 0.021 -20.693 11.379 1.00 31.17 C
ATOM 21 C6 U A 76 1.287 -20.263 11.425 1.00 31.52 C
ATOM 22 P G A 77 5.496 -23.204 13.438 1.00 44.34 P
ATOM 23 OP1 G A 77 6.852 -23.773 13.636 1.00 53.47 O
ATOM 24 OP2 G A 77 4.556 -23.898 12.522 1.00 40.97 O
ATOM 25 O5' G A 77 4.797 -22.966 14.846 1.00 36.77 O
TER
ATOM 1 O3' A B 74 -1.362 -20.385 3.818 1.00 45.30 O
ATOM 2 P U B 75 -0.854 -21.592 4.752 1.00 46.78 P
ATOM 3 OP1 U B 75 -0.250 -22.611 3.859 1.00 46.58 O
ATOM 4 OP2 U B 75 -1.994 -21.987 5.616 1.00 43.75 O
ATOM 5 O5' U B 75 0.280 -20.902 5.633 1.00 38.25 O
ATOM 6 C5' U B 75 1.414 -20.313 5.016 1.00 39.85 C
ATOM 7 C4' U B 75 2.165 -19.417 5.968 1.00 37.66 C
ATOM 8 O4' U B 75 1.344 -18.273 6.330 1.00 37.39 O
ATOM 9 C3' U B 75 2.532 -20.022 7.309 1.00 41.08 C
ATOM 10 O3' U B 75 3.644 -20.894 7.247 1.00 47.48 O
ATOM 11 C2' U B 75 2.765 -18.782 8.158 1.00 38.28 C
ATOM 12 O2' U B 75 4.003 -18.170 7.826 1.00 36.18 O
ATOM 13 C1' U B 75 1.635 -17.884 7.660 1.00 36.16 C
ATOM 14 N1 U B 75 0.414 -18.045 8.478 1.00 33.04 N
ATOM 15 C2 U B 75 0.361 -17.346 9.668 1.00 32.67 C
ATOM 16 O2 U B 75 1.263 -16.610 10.038 1.00 32.16 O
ATOM 17 N3 U B 75 -0.786 -17.540 10.403 1.00 31.90 N
ATOM 18 C4 U B 75 -1.860 -18.347 10.074 1.00 35.25 C
ATOM 19 O4 U B 75 -2.825 -18.416 10.840 1.00 31.17 O
ATOM 20 C5 U B 75 -1.724 -19.043 8.827 1.00 35.73 C
ATOM 21 C6 U B 75 -0.617 -18.874 8.093 1.00 35.46 C
ATOM 22 P U B 76 3.689 -22.200 8.182 1.00 44.33 P
ATOM 23 OP1 U B 76 4.887 -22.979 7.786 1.00 53.44 O
ATOM 24 OP2 U B 76 2.354 -22.849 8.097 1.00 35.20 O
ATOM 25 O5' U B 76 3.900 -21.584 9.634 1.00 35.78 O
TER
ATOM 2 P U A 76 3.689 -22.200 8.182 1.00 44.33 P
ATOM 3 OP1 U A 76 4.887 -22.979 7.786 1.00 53.44 O
ATOM 4 OP2 U A 76 2.354 -22.849 8.097 1.00 35.20 O
ATOM 5 O5' U A 76 3.900 -21.584 9.634 1.00 35.78 O
ATOM 6 C5' U A 76 5.000 -20.731 9.906 1.00 35.54 C
ATOM 7 C4' U A 76 4.869 -20.067 11.254 1.00 37.19 C
ATOM 8 O4' U A 76 3.748 -19.142 11.252 1.00 38.13 O
ATOM 9 C3' U A 76 4.565 -20.979 12.427 1.00 37.82 C
ATOM 10 O3' U A 76 5.688 -21.711 12.879 1.00 38.73 O
ATOM 11 C2' U A 76 4.016 -19.997 13.451 1.00 37.52 C
ATOM 12 O2' U A 76 5.065 -19.229 14.022 1.00 36.32 O
ATOM 13 C1' U A 76 3.183 -19.083 12.550 1.00 36.18 C
ATOM 14 N1 U A 76 1.779 -19.535 12.480 1.00 32.88 N
ATOM 15 C2 U A 76 0.988 -19.227 13.570 1.00 32.25 C
ATOM 16 O2 U A 76 1.400 -18.593 14.527 1.00 27.45 O
ATOM 17 N3 U A 76 -0.303 -19.678 13.494 1.00 29.89 N
ATOM 18 C4 U A 76 -0.864 -20.403 12.464 1.00 32.37 C
ATOM 19 O4 U A 76 -2.043 -20.741 12.550 1.00 33.05 O
ATOM 20 C5 U A 76 0.021 -20.693 11.379 1.00 31.17 C
ATOM 21 C6 U A 76 1.287 -20.263 11.425 1.00 31.52 C
ATOM 22 P G A 77 5.496 -23.204 13.438 1.00 44.34 P
ATOM 23 OP1 G A 77 6.852 -23.773 13.636 1.00 53.47 O
ATOM 24 OP2 G A 77 4.556 -23.898 12.522 1.00 40.97 O
ATOM 25 O5' G A 77 4.797 -22.966 14.846 1.00 36.77 O
TER
ATOM 1 O3' A B 74 -1.362 -20.385 3.818 1.00 45.30 O
ATOM 2 P U B 75 -0.854 -21.592 4.752 1.00 46.78 P
ATOM 3 OP1 U B 75 -0.250 -22.611 3.859 1.00 46.58 O
ATOM 4 OP2 U B 75 -1.994 -21.987 5.616 1.00 43.75 O
ATOM 5 O5' U B 75 0.280 -20.902 5.633 1.00 38.25 O
ATOM 6 C5' U B 75 1.414 -20.313 5.016 1.00 39.85 C
ATOM 7 C4' U B 75 2.165 -19.417 5.968 1.00 37.66 C
ATOM 8 O4' U B 75 1.344 -18.273 6.330 1.00 37.39 O
ATOM 9 C3' U B 75 2.532 -20.022 7.309 1.00 41.08 C
ATOM 10 O3' U B 75 3.644 -20.894 7.247 1.00 47.48 O
ATOM 11 C2' U B 75 2.765 -18.782 8.158 1.00 38.28 C
ATOM 12 O2' U B 75 4.003 -18.170 7.826 1.00 36.18 O
ATOM 13 C1' U B 75 1.635 -17.884 7.660 1.00 36.16 C
ATOM 14 N1 U B 75 0.414 -18.045 8.478 1.00 33.04 N
ATOM 15 C2 U B 75 0.361 -17.346 9.668 1.00 32.67 C
ATOM 16 O2 U B 75 1.263 -16.610 10.038 1.00 32.16 O
ATOM 17 N3 U B 75 -0.786 -17.540 10.403 1.00 31.90 N
ATOM 18 C4 U B 75 -1.860 -18.347 10.074 1.00 35.25 C
ATOM 19 O4 U B 75 -2.825 -18.416 10.840 1.00 31.17 O
ATOM 20 C5 U B 75 -1.724 -19.043 8.827 1.00 35.73 C
ATOM 21 C6 U B 75 -0.617 -18.874 8.093 1.00 35.46 C
ATOM 22 P U B 76 3.689 -22.200 8.182 1.00 44.33 P
ATOM 23 OP1 U B 76 4.887 -22.979 7.786 1.00 53.44 O
ATOM 24 OP2 U B 76 2.354 -22.849 8.097 1.00 35.20 O
ATOM 25 O5' U B 76 3.900 -21.584 9.634 1.00 35.78 O
TER
Atoms:
C4: (-0.864,-20.403,12.464)
N3: (-0.303,-19.678,13.494)
OP1: (4.887,-22.979,7.786)
OP2: (2.354,-22.849,8.097)
C2: (0.988,-19.227,13.570)
C1': (3.183,-19.083,12.550)
C3': (4.565,-20.979,12.427)
O5': (3.900,-21.584,9.634)
O4': (3.748,-19.142,11.252)
C5': (5.000,-20.731,9.906)
P: (3.689,-22.200,8.182)
C4': (4.869,-20.067,11.254)
C2': (4.016,-19.997,13.451)
O2': (5.065,-19.229,14.022)
N1: (1.779,-19.535,12.480)
O4: (-2.043,-20.741,12.550)
O2: (1.400,-18.593,14.527)
C6: (1.287,-20.263,11.425)
C5: (0.021,-20.693,11.379)
O3': (5.688,-21.711,12.879)
N3: (-0.303,-19.678,13.494)
OP1: (4.887,-22.979,7.786)
OP2: (2.354,-22.849,8.097)
C2: (0.988,-19.227,13.570)
C1': (3.183,-19.083,12.550)
C3': (4.565,-20.979,12.427)
O5': (3.900,-21.584,9.634)
O4': (3.748,-19.142,11.252)
C5': (5.000,-20.731,9.906)
P: (3.689,-22.200,8.182)
C4': (4.869,-20.067,11.254)
C2': (4.016,-19.997,13.451)
O2': (5.065,-19.229,14.022)
N1: (1.779,-19.535,12.480)
O4: (-2.043,-20.741,12.550)
O2: (1.400,-18.593,14.527)
C6: (1.287,-20.263,11.425)
C5: (0.021,-20.693,11.379)
O3': (5.688,-21.711,12.879)
C4: (-1.860,-18.347,10.074)
N3: (-0.786,-17.540,10.403)
OP1: (-0.250,-22.611,3.859)
OP2: (-1.994,-21.987,5.616)
C2: (0.361,-17.346,9.668)
C1': (1.635,-17.884,7.660)
C3': (2.532,-20.022,7.309)
O5': (0.280,-20.902,5.633)
O4': (1.344,-18.273,6.330)
C5': (1.414,-20.313,5.016)
P: (-0.854,-21.592,4.752)
C4': (2.165,-19.417,5.968)
C2': (2.765,-18.782,8.158)
O2': (4.003,-18.170,7.826)
N1: (0.414,-18.045,8.478)
O4: (-2.825,-18.416,10.840)
O2: (1.263,-16.610,10.038)
C6: (-0.617,-18.874,8.093)
C5: (-1.724,-19.043,8.827)
O3': (3.644,-20.894,7.247)
N3: (-0.786,-17.540,10.403)
OP1: (-0.250,-22.611,3.859)
OP2: (-1.994,-21.987,5.616)
C2: (0.361,-17.346,9.668)
C1': (1.635,-17.884,7.660)
C3': (2.532,-20.022,7.309)
O5': (0.280,-20.902,5.633)
O4': (1.344,-18.273,6.330)
C5': (1.414,-20.313,5.016)
P: (-0.854,-21.592,4.752)
C4': (2.165,-19.417,5.968)
C2': (2.765,-18.782,8.158)
O2': (4.003,-18.170,7.826)
N1: (0.414,-18.045,8.478)
O4: (-2.825,-18.416,10.840)
O2: (1.263,-16.610,10.038)
C6: (-0.617,-18.874,8.093)
C5: (-1.724,-19.043,8.827)
O3': (3.644,-20.894,7.247)
Image (generated by PyMOL):