ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02324:0887

Extra

PDB:
ATOM 1 O3' G A2323 57.352 107.938 94.680 1.00 42.48 O
ATOM 2 P A A2324 56.617 106.590 94.200 1.00 44.38 P
ATOM 3 OP1 A A2324 55.143 106.815 94.185 1.00 42.75 O
ATOM 4 OP2 A A2324 57.185 105.498 95.034 1.00 46.14 O
ATOM 5 O5' A A2324 57.118 106.349 92.702 1.00 45.32 O
ATOM 6 C5' A A2324 58.500 106.047 92.411 1.00 43.50 C
ATOM 7 C4' A A2324 58.641 104.610 91.964 1.00 43.27 C
ATOM 8 O4' A A2324 57.788 104.365 90.811 1.00 43.23 O
ATOM 9 C3' A A2324 60.045 104.167 91.556 1.00 44.28 C
ATOM 10 O3' A A2324 60.259 102.829 91.971 1.00 49.28 O
ATOM 11 C2' A A2324 59.979 104.195 90.035 1.00 43.87 C
ATOM 12 O2' A A2324 60.882 103.303 89.419 1.00 43.92 O
ATOM 13 C1' A A2324 58.542 103.749 89.789 1.00 43.62 C
ATOM 14 N9 A A2324 58.020 104.170 88.486 1.00 43.51 N
ATOM 15 C8 A A2324 57.913 105.445 87.989 1.00 43.24 C
ATOM 16 N7 A A2324 57.450 105.499 86.765 1.00 42.14 N
ATOM 17 C5 A A2324 57.225 104.172 86.433 1.00 43.14 C
ATOM 18 C6 A A2324 56.740 103.553 85.262 1.00 42.69 C
ATOM 19 N6 A A2324 56.402 104.218 84.153 1.00 39.08 N
ATOM 20 N1 A A2324 56.619 102.208 85.268 1.00 41.74 N
ATOM 21 C2 A A2324 56.975 101.538 86.366 1.00 41.44 C
ATOM 22 N3 A A2324 57.456 102.000 87.518 1.00 43.83 N
ATOM 23 C4 A A2324 57.557 103.342 87.489 1.00 43.19 C
ATOM 24 P U A2325 60.878 102.530 93.425 1.00 52.47 P
ATOM 25 OP1 U A2325 60.751 101.066 93.669 1.00 53.86 O
ATOM 26 OP2 U A2325 60.304 103.493 94.404 1.00 54.06 O
ATOM 27 O5' U A2325 62.431 102.850 93.295 1.00 54.45 O
TER

ATOM 1 O3' C B 886 57.818 107.952 81.294 1.00 29.36 O
ATOM 2 P U B 887 56.245 107.760 81.485 1.00 30.92 P
ATOM 3 OP1 U B 887 56.050 107.285 82.890 1.00 31.84 O
ATOM 4 OP2 U B 887 55.731 106.940 80.362 1.00 33.01 O
ATOM 5 O5' U B 887 55.672 109.243 81.388 1.00 28.37 O
ATOM 6 C5' U B 887 55.904 110.168 82.469 1.00 28.87 C
ATOM 7 C4' U B 887 55.526 111.583 82.087 1.00 28.53 C
ATOM 8 O4' U B 887 56.264 112.015 80.912 1.00 32.56 O
ATOM 9 C3' U B 887 54.096 111.869 81.671 1.00 28.49 C
ATOM 10 O3' U B 887 53.207 111.899 82.778 1.00 28.92 O
ATOM 11 C2' U B 887 54.257 113.259 81.072 1.00 28.24 C
ATOM 12 O2' U B 887 54.438 114.254 82.049 1.00 28.94 O
ATOM 13 C1' U B 887 55.581 113.115 80.326 1.00 27.94 C
ATOM 14 N1 U B 887 55.366 112.891 78.882 1.00 28.24 N
ATOM 15 C2 U B 887 54.868 113.970 78.165 1.00 24.79 C
ATOM 16 O2 U B 887 54.659 115.055 78.670 1.00 27.70 O
ATOM 17 N3 U B 887 54.641 113.744 76.838 1.00 25.16 N
ATOM 18 C4 U B 887 54.831 112.575 76.153 1.00 31.23 C
ATOM 19 O4 U B 887 54.544 112.540 74.958 1.00 32.87 O
ATOM 20 C5 U B 887 55.372 111.489 76.944 1.00 29.70 C
ATOM 21 C6 U B 887 55.611 111.680 78.254 1.00 26.59 C
ATOM 22 P G B 888 51.640 111.628 82.552 1.00 29.59 P
ATOM 23 OP1 G B 888 50.980 111.769 83.872 1.00 28.49 O
ATOM 24 OP2 G B 888 51.498 110.364 81.792 1.00 30.73 O
ATOM 25 O5' G B 888 51.153 112.820 81.612 1.00 29.99 O
TER

Atoms:
OP1: (55.143,106.815,94.185)
OP2: (57.185,105.498,95.034)
C3': (60.045,104.167,91.556)
C1': (58.542,103.749,89.789)
C5': (58.500,106.047,92.411)
O4': (57.788,104.365,90.811)
C8: (57.913,105.445,87.989)
O2': (60.882,103.303,89.419)
C6: (56.740,103.553,85.262)
C5: (57.225,104.172,86.433)
C4: (57.557,103.342,87.489)
P: (56.617,106.590,94.200)
C4': (58.641,104.610,91.964)
C2': (59.979,104.195,90.035)
C2: (56.975,101.538,86.366)
N1: (56.619,102.208,85.268)
N3: (57.456,102.000,87.518)
N6: (56.402,104.218,84.153)
N7: (57.450,105.499,86.765)
N9: (58.020,104.170,88.486)
O5': (57.118,106.349,92.702)
O3': (60.259,102.829,91.971)
C4: (54.831,112.575,76.153)
N3: (54.641,113.744,76.838)
OP1: (56.050,107.285,82.890)
OP2: (55.731,106.940,80.362)
C2: (54.868,113.970,78.165)
C1': (55.581,113.115,80.326)
C3': (54.096,111.869,81.671)
O5': (55.672,109.243,81.388)
O4': (56.264,112.015,80.912)
C5': (55.904,110.168,82.469)
P: (56.245,107.760,81.485)
C4': (55.526,111.583,82.087)
C2': (54.257,113.259,81.072)
O2': (54.438,114.254,82.049)
N1: (55.366,112.891,78.882)
O4: (54.544,112.540,74.958)
O2: (54.659,115.055,78.670)
C6: (55.611,111.680,78.254)
C5: (55.372,111.489,76.944)
O3': (53.207,111.899,82.778)
Image (generated by PyMOL):
PyMOL image
show in jmol