ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0385:0384

Extra

PDB:
ATOM 1 O3' U A 384 83.801 87.492 38.323 1.00 56.16 O
ATOM 2 P A A 385 83.645 87.945 36.780 1.00 54.32 P
ATOM 3 OP1 A A 385 84.059 86.776 35.956 1.00 55.18 O
ATOM 4 OP2 A A 385 84.358 89.245 36.622 1.00 56.01 O
ATOM 5 O5' A A 385 82.105 88.209 36.476 1.00 51.14 O
ATOM 6 C5' A A 385 81.724 88.613 35.141 1.00 47.27 C
ATOM 7 C4' A A 385 80.228 88.605 34.970 1.00 46.13 C
ATOM 8 O4' A A 385 79.700 87.302 35.311 1.00 45.69 O
ATOM 9 C3' A A 385 79.439 89.568 35.835 1.00 46.00 C
ATOM 10 O3' A A 385 79.409 90.848 35.213 1.00 45.21 O
ATOM 11 C2' A A 385 78.052 88.939 35.823 1.00 45.17 C
ATOM 12 O2' A A 385 77.376 89.222 34.620 1.00 46.99 O
ATOM 13 C1' A A 385 78.395 87.450 35.834 1.00 44.56 C
ATOM 14 N9 A A 385 78.372 86.820 37.146 1.00 43.42 N
ATOM 15 C8 A A 385 78.808 87.301 38.353 1.00 44.87 C
ATOM 16 N7 A A 385 78.665 86.452 39.342 1.00 45.67 N
ATOM 17 C5 A A 385 78.088 85.341 38.743 1.00 45.41 C
ATOM 18 C6 A A 385 77.679 84.102 39.249 1.00 43.78 C
ATOM 19 N6 A A 385 77.785 83.756 40.532 1.00 40.81 N
ATOM 20 N1 A A 385 77.142 83.217 38.379 1.00 44.61 N
ATOM 21 C2 A A 385 77.023 83.568 37.097 1.00 43.59 C
ATOM 22 N3 A A 385 77.363 84.702 36.503 1.00 44.16 N
ATOM 23 C4 A A 385 77.899 85.557 37.392 1.00 44.85 C
ATOM 24 P U A 386 79.780 92.158 36.059 1.00 41.80 P
ATOM 25 OP1 U A 386 81.252 92.327 36.021 1.00 42.23 O
ATOM 26 OP2 U A 386 79.093 92.066 37.363 1.00 42.03 O
ATOM 27 O5' U A 386 79.099 93.321 35.220 1.00 39.92 O
TER

ATOM 1 O3' A B 383 79.318 87.021 43.423 1.00 41.61 O
ATOM 2 P U B 384 80.402 86.031 42.797 1.00 42.50 P
ATOM 3 OP1 U B 384 79.678 84.888 42.194 1.00 44.73 O
ATOM 4 OP2 U B 384 81.445 85.775 43.814 1.00 41.90 O
ATOM 5 O5' U B 384 81.010 86.870 41.593 1.00 47.30 O
ATOM 6 C5' U B 384 82.307 87.452 41.686 1.00 52.54 C
ATOM 7 C4' U B 384 83.174 86.960 40.555 1.00 55.99 C
ATOM 8 O4' U B 384 83.317 85.508 40.658 1.00 57.17 O
ATOM 9 C3' U B 384 82.661 87.243 39.141 1.00 56.49 C
ATOM 10 O3' U B 384 83.801 87.492 38.323 1.00 56.16 O
ATOM 11 C2' U B 384 82.021 85.913 38.761 1.00 60.03 C
ATOM 12 O2' U B 384 81.937 85.701 37.363 1.00 63.78 O
ATOM 13 C1' U B 384 82.996 84.932 39.414 1.00 58.77 C
ATOM 14 N1 U B 384 82.521 83.547 39.592 1.00 57.09 N
ATOM 15 C2 U B 384 83.473 82.555 39.809 1.00 56.76 C
ATOM 16 O2 U B 384 84.654 82.791 40.001 1.00 55.03 O
ATOM 17 N3 U B 384 82.983 81.272 39.796 1.00 56.68 N
ATOM 18 C4 U B 384 81.672 80.883 39.612 1.00 56.93 C
ATOM 19 O4 U B 384 81.397 79.682 39.569 1.00 57.54 O
ATOM 20 C5 U B 384 80.741 81.961 39.481 1.00 56.44 C
ATOM 21 C6 U B 384 81.182 83.223 39.480 1.00 57.13 C
ATOM 22 P A B 385 83.645 87.945 36.780 1.00 54.32 P
ATOM 23 OP1 A B 385 84.059 86.776 35.956 1.00 55.18 O
ATOM 24 OP2 A B 385 84.358 89.245 36.622 1.00 56.01 O
ATOM 25 O5' A B 385 82.105 88.209 36.476 1.00 51.14 O
TER

Atoms:
OP1: (84.059,86.776,35.956)
OP2: (84.358,89.245,36.622)
C3': (79.439,89.568,35.835)
C1': (78.395,87.450,35.834)
C5': (81.724,88.613,35.141)
O4': (79.700,87.302,35.311)
C8: (78.808,87.301,38.353)
O2': (77.376,89.222,34.620)
C6: (77.679,84.102,39.249)
C5: (78.088,85.341,38.743)
C4: (77.899,85.557,37.392)
P: (83.645,87.945,36.780)
C4': (80.228,88.605,34.970)
C2': (78.052,88.939,35.823)
C2: (77.023,83.568,37.097)
N1: (77.142,83.217,38.379)
N3: (77.363,84.702,36.503)
N6: (77.785,83.756,40.532)
N7: (78.665,86.452,39.342)
N9: (78.372,86.820,37.146)
O5': (82.105,88.209,36.476)
O3': (79.409,90.848,35.213)
C4: (81.672,80.883,39.612)
N3: (82.983,81.272,39.796)
OP1: (79.678,84.888,42.194)
OP2: (81.445,85.775,43.814)
C2: (83.473,82.555,39.809)
C1': (82.996,84.932,39.414)
C3': (82.661,87.243,39.141)
O5': (81.010,86.870,41.593)
O4': (83.317,85.508,40.658)
C5': (82.307,87.452,41.686)
P: (80.402,86.031,42.797)
C4': (83.174,86.960,40.555)
C2': (82.021,85.913,38.761)
O2': (81.937,85.701,37.363)
N1: (82.521,83.547,39.592)
O4: (81.397,79.682,39.569)
O2: (84.654,82.791,40.001)
C6: (81.182,83.223,39.480)
C5: (80.741,81.961,39.481)
O3': (83.801,87.492,38.323)
Image (generated by PyMOL):
PyMOL image
show in jmol