ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02324:0887

Extra

PDB:
ATOM 1 O3' G A2323 57.480 108.358 94.611 1.00 41.58 O
ATOM 2 P A A2324 56.718 107.003 94.186 1.00 42.74 P
ATOM 3 OP1 A A2324 55.242 107.231 94.176 1.00 40.16 O
ATOM 4 OP2 A A2324 57.298 105.943 95.060 1.00 42.66 O
ATOM 5 O5' A A2324 57.200 106.708 92.694 1.00 44.22 O
ATOM 6 C5' A A2324 58.579 106.399 92.403 1.00 43.14 C
ATOM 7 C4' A A2324 58.715 104.954 91.981 1.00 43.55 C
ATOM 8 O4' A A2324 57.864 104.692 90.827 1.00 43.30 O
ATOM 9 C3' A A2324 60.119 104.501 91.586 1.00 44.36 C
ATOM 10 O3' A A2324 60.324 103.180 92.047 1.00 47.78 O
ATOM 11 C2' A A2324 60.062 104.508 90.062 1.00 44.85 C
ATOM 12 O2' A A2324 60.959 103.605 89.448 1.00 44.07 O
ATOM 13 C1' A A2324 58.624 104.072 89.810 1.00 43.41 C
ATOM 14 N9 A A2324 58.122 104.514 88.509 1.00 43.11 N
ATOM 15 C8 A A2324 58.020 105.800 88.043 1.00 43.55 C
ATOM 16 N7 A A2324 57.557 105.884 86.819 1.00 43.59 N
ATOM 17 C5 A A2324 57.333 104.564 86.454 1.00 42.92 C
ATOM 18 C6 A A2324 56.840 103.974 85.269 1.00 41.76 C
ATOM 19 N6 A A2324 56.477 104.670 84.187 1.00 38.89 N
ATOM 20 N1 A A2324 56.730 102.629 85.238 1.00 39.93 N
ATOM 21 C2 A A2324 57.092 101.933 86.317 1.00 38.17 C
ATOM 22 N3 A A2324 57.569 102.366 87.482 1.00 40.92 N
ATOM 23 C4 A A2324 57.668 103.708 87.488 1.00 42.98 C
ATOM 24 P U A2325 60.902 102.935 93.529 1.00 51.70 P
ATOM 25 OP1 U A2325 60.828 101.469 93.787 1.00 51.26 O
ATOM 26 OP2 U A2325 60.245 103.891 94.469 1.00 53.07 O
ATOM 27 O5' U A2325 62.440 103.333 93.442 1.00 53.70 O
TER

ATOM 1 O3' C B 886 57.938 108.400 81.268 1.00 31.79 O
ATOM 2 P U B 887 56.366 108.224 81.471 1.00 30.62 P
ATOM 3 OP1 U B 887 56.193 107.711 82.861 1.00 32.27 O
ATOM 4 OP2 U B 887 55.822 107.449 80.332 1.00 32.34 O
ATOM 5 O5' U B 887 55.786 109.708 81.417 1.00 30.59 O
ATOM 6 C5' U B 887 56.063 110.621 82.487 1.00 31.29 C
ATOM 7 C4' U B 887 55.666 112.034 82.133 1.00 31.13 C
ATOM 8 O4' U B 887 56.429 112.519 80.998 1.00 35.43 O
ATOM 9 C3' U B 887 54.240 112.333 81.707 1.00 31.55 C
ATOM 10 O3' U B 887 53.339 112.330 82.803 1.00 30.88 O
ATOM 11 C2' U B 887 54.413 113.746 81.165 1.00 30.96 C
ATOM 12 O2' U B 887 54.626 114.689 82.187 1.00 33.23 O
ATOM 13 C1' U B 887 55.736 113.619 80.419 1.00 31.32 C
ATOM 14 N1 U B 887 55.513 113.384 78.982 1.00 31.84 N
ATOM 15 C2 U B 887 55.036 114.460 78.245 1.00 29.72 C
ATOM 16 O2 U B 887 54.839 115.561 78.730 1.00 32.00 O
ATOM 17 N3 U B 887 54.798 114.205 76.926 1.00 30.72 N
ATOM 18 C4 U B 887 54.992 113.025 76.265 1.00 33.41 C
ATOM 19 O4 U B 887 54.705 112.963 75.069 1.00 33.23 O
ATOM 20 C5 U B 887 55.523 111.959 77.076 1.00 32.13 C
ATOM 21 C6 U B 887 55.752 112.169 78.379 1.00 29.17 C
ATOM 22 P G B 888 51.775 112.054 82.556 1.00 32.43 P
ATOM 23 OP1 G B 888 51.132 112.200 83.887 1.00 32.19 O
ATOM 24 OP2 G B 888 51.632 110.782 81.811 1.00 34.53 O
ATOM 25 O5' G B 888 51.283 113.247 81.611 1.00 31.90 O
TER

Atoms:
OP1: (55.242,107.231,94.176)
OP2: (57.298,105.943,95.060)
C3': (60.119,104.501,91.586)
C1': (58.624,104.072,89.810)
C5': (58.579,106.399,92.403)
O4': (57.864,104.692,90.827)
C8: (58.020,105.800,88.043)
O2': (60.959,103.605,89.448)
C6: (56.840,103.974,85.269)
C5: (57.333,104.564,86.454)
C4: (57.668,103.708,87.488)
P: (56.718,107.003,94.186)
C4': (58.715,104.954,91.981)
C2': (60.062,104.508,90.062)
C2: (57.092,101.933,86.317)
N1: (56.730,102.629,85.238)
N3: (57.569,102.366,87.482)
N6: (56.477,104.670,84.187)
N7: (57.557,105.884,86.819)
N9: (58.122,104.514,88.509)
O5': (57.200,106.708,92.694)
O3': (60.324,103.180,92.047)
C4: (54.992,113.025,76.265)
N3: (54.798,114.205,76.926)
OP1: (56.193,107.711,82.861)
OP2: (55.822,107.449,80.332)
C2: (55.036,114.460,78.245)
C1': (55.736,113.619,80.419)
C3': (54.240,112.333,81.707)
O5': (55.786,109.708,81.417)
O4': (56.429,112.519,80.998)
C5': (56.063,110.621,82.487)
P: (56.366,108.224,81.471)
C4': (55.666,112.034,82.133)
C2': (54.413,113.746,81.165)
O2': (54.626,114.689,82.187)
N1: (55.513,113.384,78.982)
O4: (54.705,112.963,75.069)
O2: (54.839,115.561,78.730)
C6: (55.752,112.169,78.379)
C5: (55.523,111.959,77.076)
O3': (53.339,112.330,82.803)
Image (generated by PyMOL):
PyMOL image
show in jmol