ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0385:0384

Extra

PDB:
ATOM 1 O3' U A 384 83.685 87.402 38.302 1.00 55.87 O
ATOM 2 P A A 385 83.541 87.923 36.780 1.00 53.73 P
ATOM 3 OP1 A A 385 84.038 86.806 35.933 1.00 53.77 O
ATOM 4 OP2 A A 385 84.195 89.258 36.689 1.00 54.43 O
ATOM 5 O5' A A 385 81.991 88.111 36.454 1.00 49.91 O
ATOM 6 C5' A A 385 81.602 88.475 35.109 1.00 46.13 C
ATOM 7 C4' A A 385 80.103 88.501 34.954 1.00 44.15 C
ATOM 8 O4' A A 385 79.543 87.207 35.287 1.00 44.51 O
ATOM 9 C3' A A 385 79.349 89.480 35.829 1.00 43.52 C
ATOM 10 O3' A A 385 79.351 90.768 35.225 1.00 43.09 O
ATOM 11 C2' A A 385 77.946 88.880 35.843 1.00 43.39 C
ATOM 12 O2' A A 385 77.237 89.165 34.659 1.00 44.53 O
ATOM 13 C1' A A 385 78.257 87.382 35.847 1.00 42.88 C
ATOM 14 N9 A A 385 78.259 86.756 37.162 1.00 42.56 N
ATOM 15 C8 A A 385 78.701 87.258 38.358 1.00 44.00 C
ATOM 16 N7 A A 385 78.578 86.420 39.359 1.00 46.02 N
ATOM 17 C5 A A 385 78.014 85.292 38.780 1.00 44.55 C
ATOM 18 C6 A A 385 77.631 84.050 39.306 1.00 44.08 C
ATOM 19 N6 A A 385 77.776 83.713 40.587 1.00 41.92 N
ATOM 20 N1 A A 385 77.088 83.149 38.457 1.00 44.13 N
ATOM 21 C2 A A 385 76.949 83.481 37.172 1.00 43.75 C
ATOM 22 N3 A A 385 77.273 84.611 36.558 1.00 45.04 N
ATOM 23 C4 A A 385 77.808 85.487 37.429 1.00 44.58 C
ATOM 24 P U A 386 79.658 92.073 36.111 1.00 38.69 P
ATOM 25 OP1 U A 386 81.127 92.255 36.177 1.00 40.23 O
ATOM 26 OP2 U A 386 78.883 91.957 37.365 1.00 39.32 O
ATOM 27 O5' U A 386 79.026 93.252 35.254 1.00 37.10 O
TER

ATOM 1 O3' A B 383 79.208 86.989 43.454 1.00 40.46 O
ATOM 2 P U B 384 80.294 85.996 42.826 1.00 41.74 P
ATOM 3 OP1 U B 384 79.575 84.829 42.266 1.00 45.45 O
ATOM 4 OP2 U B 384 81.357 85.780 43.829 1.00 40.68 O
ATOM 5 O5' U B 384 80.877 86.799 41.583 1.00 48.55 O
ATOM 6 C5' U B 384 82.156 87.431 41.654 1.00 53.60 C
ATOM 7 C4' U B 384 83.038 86.926 40.545 1.00 57.01 C
ATOM 8 O4' U B 384 83.175 85.474 40.674 1.00 58.47 O
ATOM 9 C3' U B 384 82.541 87.188 39.119 1.00 57.53 C
ATOM 10 O3' U B 384 83.685 87.402 38.302 1.00 55.87 O
ATOM 11 C2' U B 384 81.903 85.856 38.751 1.00 60.88 C
ATOM 12 O2' U B 384 81.847 85.630 37.355 1.00 64.77 O
ATOM 13 C1' U B 384 82.865 84.881 39.433 1.00 60.08 C
ATOM 14 N1 U B 384 82.386 83.498 39.611 1.00 58.25 N
ATOM 15 C2 U B 384 83.332 82.505 39.852 1.00 58.06 C
ATOM 16 O2 U B 384 84.517 82.735 40.055 1.00 54.89 O
ATOM 17 N3 U B 384 82.834 81.226 39.842 1.00 57.79 N
ATOM 18 C4 U B 384 81.525 80.843 39.616 1.00 58.32 C
ATOM 19 O4 U B 384 81.247 79.648 39.562 1.00 59.24 O
ATOM 20 C5 U B 384 80.603 81.921 39.458 1.00 58.36 C
ATOM 21 C6 U B 384 81.049 83.178 39.472 1.00 58.68 C
ATOM 22 P A B 385 83.541 87.923 36.780 1.00 53.73 P
ATOM 23 OP1 A B 385 84.038 86.806 35.933 1.00 53.77 O
ATOM 24 OP2 A B 385 84.195 89.258 36.689 1.00 54.43 O
ATOM 25 O5' A B 385 81.991 88.111 36.454 1.00 49.91 O
TER

Atoms:
OP1: (84.038,86.806,35.933)
OP2: (84.195,89.258,36.689)
C3': (79.349,89.480,35.829)
C1': (78.257,87.382,35.847)
C5': (81.602,88.475,35.109)
O4': (79.543,87.207,35.287)
C8: (78.701,87.258,38.358)
O2': (77.237,89.165,34.659)
C6: (77.631,84.050,39.306)
C5: (78.014,85.292,38.780)
C4: (77.808,85.487,37.429)
P: (83.541,87.923,36.780)
C4': (80.103,88.501,34.954)
C2': (77.946,88.880,35.843)
C2: (76.949,83.481,37.172)
N1: (77.088,83.149,38.457)
N3: (77.273,84.611,36.558)
N6: (77.776,83.713,40.587)
N7: (78.578,86.420,39.359)
N9: (78.259,86.756,37.162)
O5': (81.991,88.111,36.454)
O3': (79.351,90.768,35.225)
C4: (81.525,80.843,39.616)
N3: (82.834,81.226,39.842)
OP1: (79.575,84.829,42.266)
OP2: (81.357,85.780,43.829)
C2: (83.332,82.505,39.852)
C1': (82.865,84.881,39.433)
C3': (82.541,87.188,39.119)
O5': (80.877,86.799,41.583)
O4': (83.175,85.474,40.674)
C5': (82.156,87.431,41.654)
P: (80.294,85.996,42.826)
C4': (83.038,86.926,40.545)
C2': (81.903,85.856,38.751)
O2': (81.847,85.630,37.355)
N1: (82.386,83.498,39.611)
O4: (81.247,79.648,39.562)
O2: (84.517,82.735,40.055)
C6: (81.049,83.178,39.472)
C5: (80.603,81.921,39.458)
O3': (83.685,87.402,38.302)
Image (generated by PyMOL):
PyMOL image
show in jmol