Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02324:0887
Extra
PDB:
ATOM 1 O3' G A2323 57.382 109.053 94.613 1.00 39.61 O
ATOM 2 P A A2324 56.636 107.689 94.198 1.00 35.56 P
ATOM 3 OP1 A A2324 55.181 107.964 94.173 1.00 37.93 O
ATOM 4 OP2 A A2324 57.165 106.617 95.071 1.00 35.75 O
ATOM 5 O5' A A2324 57.138 107.395 92.716 1.00 36.98 O
ATOM 6 C5' A A2324 58.517 107.051 92.450 1.00 35.54 C
ATOM 7 C4' A A2324 58.614 105.611 92.015 1.00 34.97 C
ATOM 8 O4' A A2324 57.770 105.396 90.844 1.00 35.92 O
ATOM 9 C3' A A2324 60.000 105.090 91.649 1.00 35.48 C
ATOM 10 O3' A A2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 11 C2' A A2324 59.952 105.040 90.119 1.00 35.73 C
ATOM 12 O2' A A2324 60.783 104.052 89.545 1.00 32.71 O
ATOM 13 C1' A A2324 58.491 104.686 89.863 1.00 35.37 C
ATOM 14 N9 A A2324 58.006 105.091 88.542 1.00 36.45 N
ATOM 15 C8 A A2324 57.919 106.366 88.050 1.00 37.68 C
ATOM 16 N7 A A2324 57.449 106.432 86.828 1.00 37.48 N
ATOM 17 C5 A A2324 57.206 105.110 86.491 1.00 36.11 C
ATOM 18 C6 A A2324 56.693 104.508 85.320 1.00 37.12 C
ATOM 19 N6 A A2324 56.321 105.197 84.231 1.00 33.91 N
ATOM 20 N1 A A2324 56.573 103.161 85.307 1.00 34.70 N
ATOM 21 C2 A A2324 56.939 102.480 86.394 1.00 34.21 C
ATOM 22 N3 A A2324 57.431 102.929 87.550 1.00 36.60 N
ATOM 23 C4 A A2324 57.543 104.270 87.535 1.00 36.48 C
ATOM 24 P U A2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 25 OP1 U A2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 26 OP2 U A2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 27 O5' U A2325 62.160 103.993 93.708 1.00 39.08 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
ATOM 2 P A A2324 56.636 107.689 94.198 1.00 35.56 P
ATOM 3 OP1 A A2324 55.181 107.964 94.173 1.00 37.93 O
ATOM 4 OP2 A A2324 57.165 106.617 95.071 1.00 35.75 O
ATOM 5 O5' A A2324 57.138 107.395 92.716 1.00 36.98 O
ATOM 6 C5' A A2324 58.517 107.051 92.450 1.00 35.54 C
ATOM 7 C4' A A2324 58.614 105.611 92.015 1.00 34.97 C
ATOM 8 O4' A A2324 57.770 105.396 90.844 1.00 35.92 O
ATOM 9 C3' A A2324 60.000 105.090 91.649 1.00 35.48 C
ATOM 10 O3' A A2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 11 C2' A A2324 59.952 105.040 90.119 1.00 35.73 C
ATOM 12 O2' A A2324 60.783 104.052 89.545 1.00 32.71 O
ATOM 13 C1' A A2324 58.491 104.686 89.863 1.00 35.37 C
ATOM 14 N9 A A2324 58.006 105.091 88.542 1.00 36.45 N
ATOM 15 C8 A A2324 57.919 106.366 88.050 1.00 37.68 C
ATOM 16 N7 A A2324 57.449 106.432 86.828 1.00 37.48 N
ATOM 17 C5 A A2324 57.206 105.110 86.491 1.00 36.11 C
ATOM 18 C6 A A2324 56.693 104.508 85.320 1.00 37.12 C
ATOM 19 N6 A A2324 56.321 105.197 84.231 1.00 33.91 N
ATOM 20 N1 A A2324 56.573 103.161 85.307 1.00 34.70 N
ATOM 21 C2 A A2324 56.939 102.480 86.394 1.00 34.21 C
ATOM 22 N3 A A2324 57.431 102.929 87.550 1.00 36.60 N
ATOM 23 C4 A A2324 57.543 104.270 87.535 1.00 36.48 C
ATOM 24 P U A2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 25 OP1 U A2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 26 OP2 U A2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 27 O5' U A2325 62.160 103.993 93.708 1.00 39.08 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
Atoms:
OP1: (55.181,107.964,94.173)
OP2: (57.165,106.617,95.071)
C3': (60.000,105.090,91.649)
C1': (58.491,104.686,89.863)
C5': (58.517,107.051,92.450)
O4': (57.770,105.396,90.844)
C8: (57.919,106.366,88.050)
O2': (60.783,104.052,89.545)
C6: (56.693,104.508,85.320)
C5: (57.206,105.110,86.491)
C4: (57.543,104.270,87.535)
P: (56.636,107.689,94.198)
C4': (58.614,105.611,92.015)
C2': (59.952,105.040,90.119)
C2: (56.939,102.480,86.394)
N1: (56.573,103.161,85.307)
N3: (57.431,102.929,87.550)
N6: (56.321,105.197,84.231)
N7: (57.449,106.432,86.828)
N9: (58.006,105.091,88.542)
O5': (57.138,107.395,92.716)
O3': (60.151,103.781,92.181)
OP2: (57.165,106.617,95.071)
C3': (60.000,105.090,91.649)
C1': (58.491,104.686,89.863)
C5': (58.517,107.051,92.450)
O4': (57.770,105.396,90.844)
C8: (57.919,106.366,88.050)
O2': (60.783,104.052,89.545)
C6: (56.693,104.508,85.320)
C5: (57.206,105.110,86.491)
C4: (57.543,104.270,87.535)
P: (56.636,107.689,94.198)
C4': (58.614,105.611,92.015)
C2': (59.952,105.040,90.119)
C2: (56.939,102.480,86.394)
N1: (56.573,103.161,85.307)
N3: (57.431,102.929,87.550)
N6: (56.321,105.197,84.231)
N7: (57.449,106.432,86.828)
N9: (58.006,105.091,88.542)
O5': (57.138,107.395,92.716)
O3': (60.151,103.781,92.181)
C4: (54.933,113.382,76.225)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
Image (generated by PyMOL):